RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 DGKZQ13574 1117 aa15.55■□□□□ 0.08
CHRNA3-208ENST00000561128 PDE3AQ14432 1141 aa15.54■□□□□ 0.08
CHRNA3-208ENST00000561128 SPTY2D1Q68D10 685 aaPredicted RBP15.54■□□□□ 0.08
CHRNA3-208ENST00000561128 CCDC84Q86UT8 332 aaPredicted RBP15.54■□□□□ 0.08
CHRNA3-208ENST00000561128 SH3RF3Q8TEJ3 882 aaPredicted RBP15.54■□□□□ 0.08
CHRNA3-208ENST00000561128 ZNF512BQ96KM6 892 aaPredicted RBP15.54■□□□□ 0.08
CHRNA3-208ENST00000561128 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
CHRNA3-208ENST00000561128 ZNF112Q9UJU3 913 aa15.54■□□□□ 0.08
CHRNA3-208ENST00000561128 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 UNCXA6NJT0 531 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 PHF20L1A8MW92 1017 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 GPR25O00155 361 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 ENTPD3O75355 529 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 MS4A1P11836 297 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 CRHR2Q13324 411 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 CCDC158Q5M9N0 1113 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 REM2Q8IYK8 340 aaPredicted RBP15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 FAM43AQ8N2R8 423 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 EDC3Q96F86 508 aaKnown RBP15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 CFHR5Q9BXR6 569 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 ZNF341Q9BYN7 854 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 LRP2BPQ9P2M1 347 aa15.53■□□□□ 0.08
CHRNA3-208ENST00000561128 ATAD5Q96QE3 1844 aa15.52■□□□□ 0.08
CHRNA3-208ENST00000561128 IRF6O14896 467 aa15.52■□□□□ 0.08
CHRNA3-208ENST00000561128 DYNLL1P63167 89 aaKnown RBP15.52■□□□□ 0.08
CHRNA3-208ENST00000561128 RRP1BQ14684 758 aaKnown RBP15.52■□□□□ 0.08
CHRNA3-208ENST00000561128 RPAP2Q8IXW5 612 aaPredicted RBP15.52■□□□□ 0.08
CHRNA3-208ENST00000561128 AATFQ9NY61 560 aaKnown RBP eCLIP15.52■□□□□ 0.08
CHRNA3-208ENST00000561128 CSADQ9Y600 493 aa15.52■□□□□ 0.08
CHRNA3-208ENST00000561128 PTPRFP10586 1907 aa15.52■□□□□ 0.07
CHRNA3-208ENST00000561128 COL2A1P02458 1487 aaPredicted RBP15.52■□□□□ 0.07
CHRNA3-208ENST00000561128 CCL15-CCL14A0A0B4J2E2 113 aa15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 SMARCA5O60264 1052 aaPredicted RBP15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 CHGBP05060 677 aa15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 MOGSQ13724 837 aa15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 CCL15Q16663 113 aa15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 SHROOM1Q2M3G4 852 aaPredicted RBP15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 SLFNL1Q499Z3 407 aa15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 DCAF15Q66K64 600 aa15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 NAA16Q6N069 864 aaPredicted RBP15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 ERC1Q8IUD2 1116 aa15.51■□□□□ 0.07
CHRNA3-208ENST00000561128 RRP1P56182 461 aaKnown RBP15.5■□□□□ 0.07
CHRNA3-208ENST00000561128 NOL9Q5SY16 702 aaKnown RBP15.5■□□□□ 0.07
CHRNA3-208ENST00000561128 ERO1BQ86YB8 467 aa15.5■□□□□ 0.07
CHRNA3-208ENST00000561128 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
CHRNA3-208ENST00000561128 TEX11Q8IYF3 940 aa15.5■□□□□ 0.07
CHRNA3-208ENST00000561128 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.5■□□□□ 0.07
CHRNA3-208ENST00000561128 KIF1BPQ96EK5 621 aa15.5■□□□□ 0.07
CHRNA3-208ENST00000561128 OSBPL5Q9H0X9 879 aaPredicted RBP15.5■□□□□ 0.07
CHRNA3-208ENST00000561128 BTBD19C9JJ37 291 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 IDH1O75874 414 aaKnown RBP15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 GSTO1P78417 241 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 JAG1P78504 1218 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 MAP3K10Q02779 954 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 PPIL2Q13356 520 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 SLC4A8Q2Y0W8 1093 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 SLF2Q8IX21 1173 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 MIGA1Q8NAN2 632 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 DNAJC18Q9H819 358 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 PCDHB15Q9Y5E8 787 aa15.49■□□□□ 0.07
CHRNA3-208ENST00000561128 NAV1Q8NEY1 1877 aa15.48■□□□□ 0.07
CHRNA3-208ENST00000561128 FLT1P17948 1338 aa15.48■□□□□ 0.07
CHRNA3-208ENST00000561128 CYP7A1P22680 504 aa15.48■□□□□ 0.07
CHRNA3-208ENST00000561128 EVX2Q03828 476 aa15.48■□□□□ 0.07
CHRNA3-208ENST00000561128 CTU1Q7Z7A3 348 aaKnown RBP15.48■□□□□ 0.07
CHRNA3-208ENST00000561128 MAPKAPK5Q8IW41 473 aa15.48■□□□□ 0.07
CHRNA3-208ENST00000561128 MAGEB6Q8N7X4 407 aa15.48■□□□□ 0.07
CHRNA3-208ENST00000561128 HMMRO75330 724 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 LDHCP07864 332 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 GTF2A2P52657 109 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 HSP90AB4PQ58FF6 505 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 CD99L2Q8TCZ2 262 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 TGFBRAP1Q8WUH2 860 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 HOOK2Q96ED9 719 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 CRBNQ96SW2 442 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 SAP30BPQ9UHR5 308 aaKnown RBP15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 KCNH4Q9UQ05 1017 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 LOC285556D6RIA3 1793 aa15.47■□□□□ 0.07
CHRNA3-208ENST00000561128 ADGRA2Q96PE1 1338 aa15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 CCDC85CA6NKD9 419 aa15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 FKTNO75072 461 aa15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 INHBEP58166 350 aa15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 PPP4CP60510 307 aa15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 SCYL3Q8IZE3 742 aa15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 CLASRPQ8N2M8 674 aaKnown RBP15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 DNAJC2Q99543 621 aaKnown RBP15.46■□□□□ 0.07
CHRNA3-208ENST00000561128 MYH1P12882 1939 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 GOLIM4O00461 696 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 RAB11FIP3O75154 756 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 ALDH1A1P00352 501 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 PTPRAP18433 802 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 PPATQ06203 517 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 SNAPC2Q13487 334 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 TAF1CQ15572 869 aaPredicted RBP15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 GPAT2Q6NUI2 795 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 PALD1Q9ULE6 856 aa15.45■□□□□ 0.06
CHRNA3-208ENST00000561128 TCRBV5S4A2TA0A5A2 114 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms