RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 MSL1Q68DK7 614 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 C10orf71Q711Q0 1435 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 GCC1Q96CN9 775 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 CRAMP1Q96RY5 1269 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 UNC93B1Q9H1C4 597 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 GREM2Q9H772 168 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 RIPOR2Q9Y4F9 1068 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 OIP5O43482 229 aa6.79□□□□□ -1.32
ZEB1-220ENST00000560909 RAB11FIP3O75154 756 aa6.79□□□□□ -1.32
ZEB1-220ENST00000560909 ZBTB7AO95365 584 aa6.79□□□□□ -1.32
ZEB1-220ENST00000560909 PDE6BP35913 854 aa6.79□□□□□ -1.32
ZEB1-220ENST00000560909 ST5P78524 1137 aa6.79□□□□□ -1.32
ZEB1-220ENST00000560909 IFIT5Q13325 482 aaKnown RBP6.79□□□□□ -1.32
ZEB1-220ENST00000560909 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
ZEB1-220ENST00000560909 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
ZEB1-220ENST00000560909 CENPQQ7L2Z9 268 aaPredicted RBP6.79□□□□□ -1.32
ZEB1-220ENST00000560909 ATG9AQ7Z3C6 839 aa6.79□□□□□ -1.32
ZEB1-220ENST00000560909 SUV39H2Q9H5I1 410 aa6.79□□□□□ -1.32
ZEB1-220ENST00000560909 CD2APQ9Y5K6 639 aa6.79□□□□□ -1.32
ZEB1-220ENST00000560909 ANKRD18BA2A2Z9 1011 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 FAM177BA6PVY3 158 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 EYA2O00167 538 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 TULP1O00294 542 aaPredicted RBP6.78□□□□□ -1.32
ZEB1-220ENST00000560909 BBOX1O75936 387 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 SASH1O94885 1247 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 NPR1P16066 1061 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 KCNA3P22001 575 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 GTF2E1P29083 439 aaPredicted RBP6.78□□□□□ -1.32
ZEB1-220ENST00000560909 TGFB2P61812 414 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 RPS8P62241 208 aaKnown RBP6.78□□□□□ -1.32
ZEB1-220ENST00000560909 GRAPQ13588 217 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 LRP8Q14114 963 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 CCDC57Q2TAC2 916 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 HSP90AB4PQ58FF6 505 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 STYK1Q6J9G0 422 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 TMC4Q7Z404 712 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 VGLL2Q8N8G2 317 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 GRAPLQ8TC17 118 aaPredicted RBP6.78□□□□□ -1.32
ZEB1-220ENST00000560909 C7orf43Q8WVR3 580 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 CCDC136Q96JN2 1154 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 SPON1Q9HCB6 807 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 GPR108Q9NPR9 543 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 SEC31BQ9NQW1 1179 aa6.78□□□□□ -1.32
ZEB1-220ENST00000560909 BSDC1Q9NW68 430 aaPredicted RBP6.78□□□□□ -1.32
ZEB1-220ENST00000560909 CUEDC1Q9NWM3 386 aaPredicted RBP6.78□□□□□ -1.32
ZEB1-220ENST00000560909 LRP5O75197 1615 aa6.77□□□□□ -1.33
ZEB1-220ENST00000560909 DDX60Q8IY21 1712 aaKnown RBP6.77□□□□□ -1.33
ZEB1-220ENST00000560909 POLD1P28340 1107 aa6.77□□□□□ -1.33
ZEB1-220ENST00000560909 IL15P40933 162 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-220ENST00000560909 NUCB1Q02818 461 aa6.77□□□□□ -1.33
ZEB1-220ENST00000560909 B4GALNT3Q6L9W6 998 aa6.77□□□□□ -1.33
ZEB1-220ENST00000560909 ERC1Q8IUD2 1116 aa6.77□□□□□ -1.33
ZEB1-220ENST00000560909 CELF1Q92879 486 aaKnown RBP6.77□□□□□ -1.33
ZEB1-220ENST00000560909 MASTLQ96GX5 879 aa6.77□□□□□ -1.33
ZEB1-220ENST00000560909 CDC5LQ99459 802 aaKnown RBP6.77□□□□□ -1.33
ZEB1-220ENST00000560909 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
ZEB1-220ENST00000560909 PA2G4Q9UQ80 394 aaKnown RBP6.77□□□□□ -1.33
ZEB1-220ENST00000560909 AFDNP55196 1824 aaKnown RBP6.77□□□□□ -1.33
ZEB1-220ENST00000560909 LAMB2P55268 1798 aa6.77□□□□□ -1.33
ZEB1-220ENST00000560909 H0YIN7 160 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 SURF6O75683 361 aaKnown RBP6.76□□□□□ -1.33
ZEB1-220ENST00000560909 CCNYL3P0C7X3 344 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 FGFR2P21802 821 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 G3BP1Q13283 466 aaKnown RBP eCLIP6.76□□□□□ -1.33
ZEB1-220ENST00000560909 LRRC24Q50LG9 513 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 DDX46Q7L014 1031 aaKnown RBP6.76□□□□□ -1.33
ZEB1-220ENST00000560909 ANKRD18AQ8IVF6 992 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 KLHDC4Q8TBB5 520 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 RHPN1Q8TCX5 695 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 NLRP7Q8WX94 980 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 KIF1BPQ96EK5 621 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 RBM17Q96I25 401 aaKnown RBP6.76□□□□□ -1.33
ZEB1-220ENST00000560909 ZNF594Q96JF6 807 aaPredicted RBP6.76□□□□□ -1.33
ZEB1-220ENST00000560909 PUS3Q9BZE2 481 aaKnown RBP6.76□□□□□ -1.33
ZEB1-220ENST00000560909 PODXL2Q9NZ53 605 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 MINPP1Q9UNW1 487 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.76□□□□□ -1.33
ZEB1-220ENST00000560909 SNED1Q8TER0 1413 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 MROH5Q6ZUA9 1318 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 SALL3Q9BXA9 1300 aa6.76□□□□□ -1.33
ZEB1-220ENST00000560909 TNRC6CQ9HCJ0 1690 aaKnown RBP6.75□□□□□ -1.33
ZEB1-220ENST00000560909 GPR25O00155 361 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 ALDH1B1P30837 517 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 IGHMBP2P38935 993 aaKnown RBP6.75□□□□□ -1.33
ZEB1-220ENST00000560909 RBM26Q5T8P6 1007 aaKnown RBP6.75□□□□□ -1.33
ZEB1-220ENST00000560909 LDHAL6AQ6ZMR3 332 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 C15orf52Q6ZUT6 534 aaKnown RBP6.75□□□□□ -1.33
ZEB1-220ENST00000560909 C2CD5Q86YS7 1000 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 SP8Q8IXZ3 490 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 RPGRQ92834 1020 aaKnown RBP6.75□□□□□ -1.33
ZEB1-220ENST00000560909 HLA-CQ95604 372 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 CNKSR1Q969H4 720 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 OSBPL3Q9H4L5 887 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 STAP2Q9UGK3 403 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 EXOC6BQ9Y2D4 811 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 ATP6V0A2Q9Y487 856 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 KIF13BQ9NQT8 1826 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 ANKRD31Q8N7Z5 1873 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 IRS2Q9Y4H2 1338 aa6.75□□□□□ -1.33
ZEB1-220ENST00000560909 COL4A1P02462 1669 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms