RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 TRIM32Q13049 653 aa12.14□□□□□ -0.47
HERC1-210ENST00000560897 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
HERC1-210ENST00000560897 FAM151AQ8WW52 585 aa12.14□□□□□ -0.47
HERC1-210ENST00000560897 NCOR1O75376 2440 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 TCP10Q12799 353 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 GCKRQ14397 625 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 LDHAL6AQ6ZMR3 332 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 C1QTNF1Q9BXJ1 281 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 STK31Q9BXU1 1019 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 TTYH1Q9H313 450 aaPredicted RBP12.13□□□□□ -0.47
HERC1-210ENST00000560897 TRIM35Q9UPQ4 493 aa12.13□□□□□ -0.47
HERC1-210ENST00000560897 CYP2B6P20813 491 aa12.12□□□□□ -0.47
HERC1-210ENST00000560897 GCLCP48506 637 aaPredicted RBP12.12□□□□□ -0.47
HERC1-210ENST00000560897 SHHQ15465 462 aa12.12□□□□□ -0.47
HERC1-210ENST00000560897 CCDC57Q2TAC2 916 aa12.12□□□□□ -0.47
HERC1-210ENST00000560897 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
HERC1-210ENST00000560897 ADAMTS19Q8TE59 1207 aa12.12□□□□□ -0.47
HERC1-210ENST00000560897 ATXN2LQ8WWM7 1075 aaKnown RBP12.12□□□□□ -0.47
HERC1-210ENST00000560897 TRIB2Q92519 343 aa12.12□□□□□ -0.47
HERC1-210ENST00000560897 UHRF1Q96T88 793 aaPredicted RBP12.12□□□□□ -0.47
HERC1-210ENST00000560897 SENP6Q9GZR1 1112 aaPredicted RBP12.12□□□□□ -0.47
HERC1-210ENST00000560897 AGTPBP1Q9UPW5 1226 aa12.12□□□□□ -0.47
HERC1-210ENST00000560897 MAST2Q6P0Q8 1798 aa12.12□□□□□ -0.47
HERC1-210ENST00000560897 PTPRFP10586 1907 aa12.11□□□□□ -0.47
HERC1-210ENST00000560897 TRIM75PA6NK02 468 aa12.11□□□□□ -0.47
HERC1-210ENST00000560897 ZKSCAN1P17029 563 aaPredicted RBP12.11□□□□□ -0.47
HERC1-210ENST00000560897 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
HERC1-210ENST00000560897 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.47
HERC1-210ENST00000560897 GRIK5Q16478 980 aa12.11□□□□□ -0.47
HERC1-210ENST00000560897 CAVIN4Q5BKX8 364 aa12.11□□□□□ -0.47
HERC1-210ENST00000560897 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
HERC1-210ENST00000560897 FAM84BQ96KN1 310 aaPredicted RBP12.11□□□□□ -0.47
HERC1-210ENST00000560897 MRIQ9BWK5 157 aa12.11□□□□□ -0.47
HERC1-210ENST00000560897 THEGQ9P2T0 379 aa12.11□□□□□ -0.47
HERC1-210ENST00000560897 IQSEC3Q9UPP2 1182 aaPredicted RBP12.11□□□□□ -0.47
HERC1-210ENST00000560897 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
HERC1-210ENST00000560897 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
HERC1-210ENST00000560897 PTPRAP18433 802 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
HERC1-210ENST00000560897 GNAI1P63096 354 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 PDE3AQ14432 1141 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 HHIPL2Q6UWX4 724 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 USP38Q8NB14 1042 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 SOCS4Q8WXH5 440 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 PRDM5Q9NQX1 630 aaPredicted RBP12.1□□□□□ -0.47
HERC1-210ENST00000560897 IFT57Q9NWB7 429 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 SUGT1Q9Y2Z0 365 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 AFG3L2Q9Y4W6 797 aa12.1□□□□□ -0.47
HERC1-210ENST00000560897 ARIH1Q9Y4X5 557 aaPredicted RBP12.1□□□□□ -0.47
HERC1-210ENST00000560897 LTBP2Q14767 1821 aa12.09□□□□□ -0.47
HERC1-210ENST00000560897 DOCK2Q92608 1830 aa12.09□□□□□ -0.47
HERC1-210ENST00000560897 ZEB1P37275 1124 aaPredicted RBP12.09□□□□□ -0.47
HERC1-210ENST00000560897 CASP7P55210 303 aa12.09□□□□□ -0.47
HERC1-210ENST00000560897 C9orf50Q5SZB4 431 aa12.09□□□□□ -0.47
HERC1-210ENST00000560897 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
HERC1-210ENST00000560897 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
HERC1-210ENST00000560897 PPM1EQ8WY54 764 aa12.09□□□□□ -0.47
HERC1-210ENST00000560897 ZNF594Q96JF6 807 aaPredicted RBP12.09□□□□□ -0.47
HERC1-210ENST00000560897 GJD2Q9UKL4 321 aa12.09□□□□□ -0.47
HERC1-210ENST00000560897 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
HERC1-210ENST00000560897 RTP1P59025 263 aa12.08□□□□□ -0.48
HERC1-210ENST00000560897 MRPS5P82675 430 aaKnown RBP12.08□□□□□ -0.48
HERC1-210ENST00000560897 ASB2Q96Q27 587 aa12.08□□□□□ -0.48
HERC1-210ENST00000560897 GAS2L1Q99501 681 aaPredicted RBP12.08□□□□□ -0.48
HERC1-210ENST00000560897 ATP11BQ9Y2G3 1177 aa12.08□□□□□ -0.48
HERC1-210ENST00000560897 XRCC5P13010 732 aaKnown RBP12.07□□□□□ -0.48
HERC1-210ENST00000560897 CCND3P30281 292 aaPredicted RBP12.07□□□□□ -0.48
HERC1-210ENST00000560897 CACNB2Q08289 660 aaPredicted RBP12.07□□□□□ -0.48
HERC1-210ENST00000560897 WDR43Q15061 677 aaKnown RBP eCLIP12.07□□□□□ -0.48
HERC1-210ENST00000560897 TREML2Q5T2D2 321 aa12.07□□□□□ -0.48
HERC1-210ENST00000560897 LMBR1LQ6UX01 489 aa12.07□□□□□ -0.48
HERC1-210ENST00000560897 ZSCAN29Q8IWY8 852 aaPredicted RBP12.07□□□□□ -0.48
HERC1-210ENST00000560897 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
HERC1-210ENST00000560897 PROCA1Q8NCQ7 364 aaPredicted RBP12.07□□□□□ -0.48
HERC1-210ENST00000560897 RNPC3Q96LT9 517 aaKnown RBP12.07□□□□□ -0.48
HERC1-210ENST00000560897 CWC22Q9HCG8 908 aaKnown RBP12.07□□□□□ -0.48
HERC1-210ENST00000560897 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
HERC1-210ENST00000560897 ZNF853P0CG23 659 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 RGS2P41220 211 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 NFIAQ12857 509 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 GRIN2CQ14957 1233 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 LHX8Q68G74 356 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 BADQ92934 168 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 PLXNB2O15031 1838 aa12.06□□□□□ -0.48
HERC1-210ENST00000560897 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
HERC1-210ENST00000560897 MSCO60682 206 aa12.05□□□□□ -0.48
HERC1-210ENST00000560897 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
HERC1-210ENST00000560897 FOXO4P98177 505 aa12.05□□□□□ -0.48
HERC1-210ENST00000560897 FKBP5Q13451 457 aaPredicted RBP12.05□□□□□ -0.48
HERC1-210ENST00000560897 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
HERC1-210ENST00000560897 FBXO33Q7Z6M2 555 aa12.05□□□□□ -0.48
HERC1-210ENST00000560897 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
HERC1-210ENST00000560897 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms