RNA–Protein interactions for RNA: ENST00000560894.1

THBS1-208, Transcript of thrombospondin 1, humanhuman

TSL 2

Gene THBS1, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-208ENST00000560894 CDK12Q9NYV4 1490 aaPredicted RBP6.85□□□□□ -1.31
THBS1-208ENST00000560894 ZBTB42B2RXF5 422 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 PAGE1O75459 146 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 BMP4P12644 408 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 CPB1P15086 417 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 TFE3P19532 575 aaPredicted RBP6.85□□□□□ -1.31
THBS1-208ENST00000560894 SOX9P48436 509 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 ZNF157P51786 506 aaPredicted RBP6.85□□□□□ -1.31
THBS1-208ENST00000560894 CTBSQ01459 385 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 FAAP100Q0VG06 881 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 FAM35AQ86V20 835 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 GPR161Q8N6U8 529 aaKnown RBP6.85□□□□□ -1.31
THBS1-208ENST00000560894 BSNDQ8WZ55 320 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 MUC3BQ9H195 1237 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 MIR1-1HGQ9H1L0 117 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 CLEC4MQ9H2X3 399 aaPredicted RBP6.85□□□□□ -1.31
THBS1-208ENST00000560894 PIF1Q9H611 641 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 KCNQ5Q9NR82 932 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 R3HCC1Q9Y3T6 440 aaKnown RBP6.85□□□□□ -1.31
THBS1-208ENST00000560894 SYNMO15061 1565 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 A2ML1A8K2U0 1454 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 MED14O60244 1454 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 ZNF518AQ6AHZ1 1483 aa6.85□□□□□ -1.31
THBS1-208ENST00000560894 U2SURPO15042 1029 aaKnown RBP6.84□□□□□ -1.31
THBS1-208ENST00000560894 PTPRAP18433 802 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 PCDH1Q08174 1060 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 ZNF468Q5VIY5 522 aaPredicted RBP6.84□□□□□ -1.31
THBS1-208ENST00000560894 NBPF6Q5VWK0 638 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 PLD4Q96BZ4 506 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 ANAPC16Q96DE5 110 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 MRFAP1L1Q96HT8 127 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 NBPF4Q96M43 638 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 MLH3Q9UHC1 1453 aa6.84□□□□□ -1.31
THBS1-208ENST00000560894 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
THBS1-208ENST00000560894 GREM1O60565 184 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 SIN3BO75182 1162 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 NCLP19338 710 aaKnown RBP6.83□□□□□ -1.32
THBS1-208ENST00000560894 GARTP22102 1010 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 PCBP4P57723 403 aaKnown RBP6.83□□□□□ -1.32
THBS1-208ENST00000560894 SEZ6Q53EL9 994 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 ZNF385CQ66K41 422 aaPredicted RBP6.83□□□□□ -1.32
THBS1-208ENST00000560894 GPAT2Q6NUI2 795 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 ELMSAN1Q6PJG2 1045 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 ANKS3Q6ZW76 656 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 SV2AQ7L0J3 742 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 TRIM42Q8IWZ5 723 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 POP1Q99575 1024 aaKnown RBP6.83□□□□□ -1.32
THBS1-208ENST00000560894 SRRTQ9BXP5 876 aaKnown RBP6.83□□□□□ -1.32
THBS1-208ENST00000560894 CBX8Q9HC52 389 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 SLC6A14Q9UN76 642 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 CLTCQ00610 1675 aaKnown RBP6.83□□□□□ -1.32
THBS1-208ENST00000560894 ROBO1Q9Y6N7 1651 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 RGS12O14924 1447 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 LRP5O75197 1615 aa6.83□□□□□ -1.32
THBS1-208ENST00000560894 TLDC2A0PJX2 215 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 K7ELQ4 463 aaPredicted RBP6.82□□□□□ -1.32
THBS1-208ENST00000560894 BPNT1O95861 308 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 MCM4P33991 863 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 ETFBP38117 255 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 CRKP46108 304 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 XP32Q5T750 250 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 FBXW10Q5XX13 1052 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 KANK3Q6NY19 840 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 BNC2Q6ZN30 1099 aaPredicted RBP6.82□□□□□ -1.32
THBS1-208ENST00000560894 VWA5B2Q8N398 1253 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 NANOS1Q8WY41 292 aaKnown RBP6.82□□□□□ -1.32
THBS1-208ENST00000560894 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
THBS1-208ENST00000560894 LACRTQ9GZZ8 138 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 SMG9Q9H0W8 520 aaKnown RBP6.82□□□□□ -1.32
THBS1-208ENST00000560894 NPHP4O75161 1426 aaPredicted RBP6.82□□□□□ -1.32
THBS1-208ENST00000560894 GOLGB1Q14789 3259 aaKnown RBP6.82□□□□□ -1.32
THBS1-208ENST00000560894 ROBO2Q9HCK4 1378 aa6.82□□□□□ -1.32
THBS1-208ENST00000560894 DEPDC5O75140 1603 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 ANKRD62A6NC57 917 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 ARHGEF15O94989 841 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 B3GALT4O96024 378 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 F13A1P00488 732 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 CDK11BP21127 795 aaKnown RBP6.81□□□□□ -1.32
THBS1-208ENST00000560894 NME2P22392 152 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 RXRBP28702 533 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 CABP4P57796 275 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 SEPT6Q14141 434 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 LRRC14Q15048 493 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 CWF19L2Q2TBE0 894 aaKnown RBP6.81□□□□□ -1.32
THBS1-208ENST00000560894 ZNF772Q68DY9 489 aaPredicted RBP6.81□□□□□ -1.32
THBS1-208ENST00000560894 LLGL2Q6P1M3 1020 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 CCDC81Q6ZN84 652 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 SULF2Q8IWU5 870 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 DDX54Q8TDD1 881 aaKnown RBP6.81□□□□□ -1.32
THBS1-208ENST00000560894 HNRNPLLQ8WVV9 542 aaKnown RBP6.81□□□□□ -1.32
THBS1-208ENST00000560894 GATAD2BQ8WXI9 593 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 FERD3LQ96RJ6 166 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 CDK11AQ9UQ88 783 aaPredicted RBP6.81□□□□□ -1.32
THBS1-208ENST00000560894 PCDHB5Q9Y5E4 795 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 KIDINS220Q9ULH0 1771 aa6.81□□□□□ -1.32
THBS1-208ENST00000560894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.81□□□□□ -1.32
THBS1-208ENST00000560894 CDK13Q14004 1512 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms