RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 FAM184AQ8NB25 1140 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 SLC16A10Q8TF71 515 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 ESR2Q92731 530 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 EYA3Q99504 573 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 NAP1L2Q9ULW6 460 aaPredicted RBP15.14■□□□□ 0.01
SNX1-211ENST00000560829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX1-211ENST00000560829 DDX49Q9Y6V7 483 aaKnown RBP15.14■□□□□ 0.01
SNX1-211ENST00000560829 GAKO14976 1311 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 GPR75-ASB3A0A0A6YYF3 556 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 IFIT3O14879 490 aaKnown RBP15.14■□□□□ 0.01
SNX1-211ENST00000560829 RCAN1P53805 252 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 SART3Q15020 963 aaKnown RBP15.14■□□□□ 0.01
SNX1-211ENST00000560829 DIXDC1Q155Q3 683 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 RGS22Q8NE09 1264 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 DDX11Q96FC9 970 aa15.14■□□□□ 0.01
SNX1-211ENST00000560829 C10orf71Q711Q0 1435 aa15.13■□□□□ 0.01
SNX1-211ENST00000560829 ORC4O43929 436 aa15.13■□□□□ 0.01
SNX1-211ENST00000560829 FDPSP14324 419 aaKnown RBP15.13■□□□□ 0.01
SNX1-211ENST00000560829 TMTC2Q8N394 836 aa15.13■□□□□ 0.01
SNX1-211ENST00000560829 C7orf43Q8WVR3 580 aa15.13■□□□□ 0.01
SNX1-211ENST00000560829 NOL10Q9BSC4 688 aaKnown RBP15.13■□□□□ 0.01
SNX1-211ENST00000560829 RIMBP2O15034 1052 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 MBD3O95983 291 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 METAP2P50579 478 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNX1-211ENST00000560829 RRP12Q5JTH9 1297 aaKnown RBP15.12■□□□□ 0.01
SNX1-211ENST00000560829 SENP2Q9HC62 589 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 SNED1Q8TER0 1413 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 CYP2D7A0A087X1C5 515 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 ZBTB43O43298 467 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 GTF2IP78347 998 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 CC2D2BQ6DHV5 1058 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 SH3RF3Q8TEJ3 882 aaPredicted RBP15.12■□□□□ 0.01
SNX1-211ENST00000560829 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
SNX1-211ENST00000560829 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
SNX1-211ENST00000560829 ROBO3Q96MS0 1386 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 CCDC88AQ3V6T2 1871 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 ERICH2A1L162 156 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 SLC3A2P08195 630 aaKnown RBP15.11■□□□□ 0.01
SNX1-211ENST00000560829 PLCG2P16885 1265 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 CHRNA5P30532 468 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 RESTQ13127 1097 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 WTAPQ15007 396 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 SEC23AQ15436 765 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 NFXL1Q6ZNB6 911 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 PODNQ7Z5L7 613 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 GPT2Q8TD30 523 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 PDGFDQ9GZP0 370 aaPredicted RBP15.11■□□□□ 0.01
SNX1-211ENST00000560829 CNPY2Q9Y2B0 182 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 SLC12A7Q9Y666 1083 aa15.11■□□□□ 0.01
SNX1-211ENST00000560829 CCDC69A6NI79 296 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 H3BQV1 296 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 CPLX1O14810 134 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 CDKL5O76039 1030 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 BTDP43251 543 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 USP5P45974 858 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 DNM1Q05193 864 aaKnown RBP15.1■□□□□ 0.01
SNX1-211ENST00000560829 CSPP1Q1MSJ5 1256 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 FOXD4L6Q3SYB3 417 aaPredicted RBP15.1■□□□□ 0.01
SNX1-211ENST00000560829 IFFO2Q5TF58 517 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 C12orf60Q5U649 245 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 FOXD4L3Q6VB84 417 aaPredicted RBP15.1■□□□□ 0.01
SNX1-211ENST00000560829 USP48Q86UV5 1035 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 UBAC1Q9BSL1 405 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 GZF1Q9H116 711 aaPredicted RBP15.1■□□□□ 0.01
SNX1-211ENST00000560829 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
SNX1-211ENST00000560829 CPLX2Q6PUV4 134 aaKnown RBP15.1■□□□□ 0.01
SNX1-211ENST00000560829 FAM217BQ9NTX9 383 aaPredicted RBP15.1■□□□□ 0.01
SNX1-211ENST00000560829 GOLGA8AA7E2F4 631 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
SNX1-211ENST00000560829 RHBDL3P58872 404 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 FKBP1AP62942 108 aaKnown RBP15.09■□□□□ 0.01
SNX1-211ENST00000560829 KRT85P78386 507 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 PDE4BQ07343 736 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 NTRK3Q16288 839 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 GRIPAP1Q4V328 841 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 SYNE3Q6ZMZ3 975 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 FERMT3Q86UX7 667 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 MICU3Q86XE3 530 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 CERS5Q8N5B7 392 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 ZSCAN10Q96SZ4 725 aaPredicted RBP15.09■□□□□ 0.01
SNX1-211ENST00000560829 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 TNKSO95271 1327 aa15.09■□□□□ 0.01
SNX1-211ENST00000560829 USP17L8P0C7I0 530 aa15.08■□□□□ 0.01
SNX1-211ENST00000560829 CYP2D6P10635 497 aa15.08■□□□□ 0.01
SNX1-211ENST00000560829 CDC27P30260 824 aa15.08■□□□□ 0.01
SNX1-211ENST00000560829 DOK7Q18PE1 504 aa15.08■□□□□ 0.01
SNX1-211ENST00000560829 IQCA1Q86XH1 822 aa15.08■□□□□ 0.01
SNX1-211ENST00000560829 STK11IPQ8N1F8 1099 aa15.08■□□□□ 0.01
SNX1-211ENST00000560829 ZKSCAN3Q9BRR0 538 aa15.08■□□□□ 0.01
SNX1-211ENST00000560829 ORC3Q9UBD5 711 aaPredicted RBP15.08■□□□□ 0.01
SNX1-211ENST00000560829 ISY1Q9ULR0 285 aaKnown RBP15.08■□□□□ 0.01
SNX1-211ENST00000560829 DAGLAQ9Y4D2 1042 aa15.08■□□□□ 0.01
SNX1-211ENST00000560829 ELP1O95163 1332 aa15.08■□□□□ 0
SNX1-211ENST00000560829 STK36Q9NRP7 1315 aa15.08■□□□□ 0
SNX1-211ENST00000560829 EVX2Q03828 476 aa15.08■□□□□ 0
SNX1-211ENST00000560829 PPP2R5BQ15173 497 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms