RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 CCL15Q16663 113 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 ANKRD20A12PQ8NF67 263 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 PCMTD1Q96MG8 357 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-212ENST00000560801 NEK1Q96PY6 1258 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 MED1Q15648 1581 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-212ENST00000560801 M0QZ92 97 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 ALDH1A1P00352 501 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 EPS15P42566 896 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 NMIQ13287 307 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-212ENST00000560801 RTN1Q16799 776 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 USP50Q70EL3 339 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-212ENST00000560801 SPICE1Q8N0Z3 855 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 KBTBD3Q8NAB2 608 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 DEFB129Q9H1M3 183 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 HMG20BQ9P0W2 317 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 TNNQ9UQP3 1299 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 GLTPD2A6NH11 291 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 RAD50Q92878 1312 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 ZEB2O60315 1214 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 IGKV5-2P06315 115 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 SPP2Q13103 211 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 RGS17Q9UGC6 210 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-212ENST00000560801 PALD1Q9ULE6 856 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 USP17L5A8MUK1 530 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 DRC7Q8IY82 874 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 ZSCAN31Q96LW9 406 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-212ENST00000560801 PARK7Q99497 189 aaKnown RBP11.17□□□□□ -0.62
TRPM1-212ENST00000560801 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-212ENST00000560801 DCTPP1Q9H773 170 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 HELLSQ9NRZ9 838 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 SDR42E1Q8WUS8 393 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
TRPM1-212ENST00000560801 CCDC171Q6TFL3 1326 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 POLR1AO95602 1720 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-212ENST00000560801 TRPA1O75762 1119 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 CFBP00751 764 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 ZNF853P0CG23 659 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 CETPP11597 493 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 CALML3P27482 149 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 RABEP1Q15276 862 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 USH1GQ495M9 461 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 MFSD14CQ5VZR4 134 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 SLC26A6Q9BXS9 759 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 UPF3BQ9BZI7 483 aaKnown RBP11.16□□□□□ -0.62
TRPM1-212ENST00000560801 ADGRB2O60241 1585 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 TOMM70O94826 608 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 CCT2P78371 535 aaKnown RBP11.16□□□□□ -0.62
TRPM1-212ENST00000560801 SPOUT1Q5T280 376 aaKnown RBP11.16□□□□□ -0.62
TRPM1-212ENST00000560801 OLFM4Q6UX06 510 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 ZNF396Q96N95 335 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-212ENST00000560801 LBHD1Q9BQE6 289 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-212ENST00000560801 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 KANSL2Q9H9L4 492 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 PKD2L1Q9P0L9 805 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 IBTKQ9P2D0 1353 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-212ENST00000560801 KLF18A0A0U1RQI7 1052 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-212ENST00000560801 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 AZI2Q9H6S1 392 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 NMRK2Q9NPI5 230 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 ATP8A2Q9NTI2 1148 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
TRPM1-212ENST00000560801 TMEM88BA6NKF7 163 aa11.15□□□□□ -0.62
TRPM1-212ENST00000560801 PDE4CQ08493 712 aa11.15□□□□□ -0.62
TRPM1-212ENST00000560801 SLFN13Q68D06 897 aa11.15□□□□□ -0.62
TRPM1-212ENST00000560801 PDE4DQ08499 809 aa11.15□□□□□ -0.62
TRPM1-212ENST00000560801 CEBPZQ03701 1054 aaKnown RBP11.15□□□□□ -0.62
TRPM1-212ENST00000560801 SLIT2O94813 1529 aa11.15□□□□□ -0.62
TRPM1-212ENST00000560801 POTEB2H3BUK9 544 aa11.15□□□□□ -0.63
TRPM1-212ENST00000560801 MAP2K1Q02750 393 aaPredicted RBP11.15□□□□□ -0.63
TRPM1-212ENST00000560801 NOGQ13253 232 aa11.15□□□□□ -0.63
TRPM1-212ENST00000560801 MLXIPQ9HAP2 919 aa11.15□□□□□ -0.63
TRPM1-212ENST00000560801 SUGT1Q9Y2Z0 365 aa11.15□□□□□ -0.63
TRPM1-212ENST00000560801 TMEM232C9JQI7 657 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 PRC1O43663 620 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 ATP5JP18859 108 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 PRDX5P30044 214 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 MECOMQ03112 1051 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 VPS33BQ9H267 617 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 ADD3Q9UEY8 706 aaKnown RBP11.14□□□□□ -0.63
TRPM1-212ENST00000560801 SCAF8Q9UPN6 1271 aaKnown RBP11.14□□□□□ -0.63
TRPM1-212ENST00000560801 RLBP1P12271 317 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 DHX8Q14562 1220 aaKnown RBP11.14□□□□□ -0.63
TRPM1-212ENST00000560801 TSR1Q2NL82 804 aaKnown RBP11.14□□□□□ -0.63
TRPM1-212ENST00000560801 FAM47AQ5JRC9 791 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 ERMNQ8TAM6 284 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 HOXC10Q9NYD6 342 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 ZBTB21Q9ULJ3 1066 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 PPLO60437 1756 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 USP17L10C9JJH3 530 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 SDSP20132 328 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 PDE4AP27815 886 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 GNA11P29992 359 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 LARP1BQ659C4 914 aaKnown RBP11.14□□□□□ -0.63
TRPM1-212ENST00000560801 EAF2Q96CJ1 260 aaPredicted RBP11.14□□□□□ -0.63
TRPM1-212ENST00000560801 C8orf76Q96K31 380 aa11.14□□□□□ -0.63
TRPM1-212ENST00000560801 ZBTB40Q9NUA8 1239 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms