RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 TSC1Q92574 1164 aa20.41■□□□□ 0.86
TRPM1-211ENST00000560658 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.41■□□□□ 0.86
TRPM1-211ENST00000560658 OGFRQ9NZT2 677 aa20.41■□□□□ 0.86
TRPM1-211ENST00000560658 IFNKQ9P0W0 207 aa20.41■□□□□ 0.86
TRPM1-211ENST00000560658 HLFQ16534 295 aa20.4■□□□□ 0.86
TRPM1-211ENST00000560658 SPATA5Q8NB90 893 aa20.4■□□□□ 0.86
TRPM1-211ENST00000560658 CCDC34Q96HJ3 373 aa20.4■□□□□ 0.86
TRPM1-211ENST00000560658 CEP131Q9UPN4 1083 aa20.4■□□□□ 0.86
TRPM1-211ENST00000560658 WDHD1O75717 1129 aaPredicted RBP20.39■□□□□ 0.86
TRPM1-211ENST00000560658 FANCCQ00597 558 aa20.39■□□□□ 0.86
TRPM1-211ENST00000560658 RILPL1Q5EBL4 403 aa20.39■□□□□ 0.86
TRPM1-211ENST00000560658 AKNAD1Q5T1N1 836 aa20.39■□□□□ 0.86
TRPM1-211ENST00000560658 KANK3Q6NY19 840 aa20.39■□□□□ 0.86
TRPM1-211ENST00000560658 PI16Q6UXB8 463 aa20.39■□□□□ 0.86
TRPM1-211ENST00000560658 IFNL3Q8IZI9 196 aa20.39■□□□□ 0.86
TRPM1-211ENST00000560658 KRI1Q8N9T8 703 aaKnown RBP20.39■□□□□ 0.86
TRPM1-211ENST00000560658 ZNF579Q8NAF0 562 aaKnown RBP20.39■□□□□ 0.86
TRPM1-211ENST00000560658 STAG1Q8WVM7 1258 aa20.39■□□□□ 0.86
TRPM1-211ENST00000560658 FOXP1Q9H334 677 aaPredicted RBP20.39■□□□□ 0.86
TRPM1-211ENST00000560658 NHSL1Q5SYE7 1610 aa20.39■□□□□ 0.85
TRPM1-211ENST00000560658 B4E1Z4 1266 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 TMED8Q6PL24 325 aaPredicted RBP20.38■□□□□ 0.85
TRPM1-211ENST00000560658 TMC6Q7Z403 805 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 TRIML1Q8N9V2 468 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 CCDC85AQ96PX6 553 aaPredicted RBP20.38■□□□□ 0.85
TRPM1-211ENST00000560658 DOCK2Q92608 1830 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 PLCH1Q4KWH8 1693 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 MROH7-TTC4A0A0A0MT08 1334 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 ERICH2A1L162 156 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 IFIT3O14879 490 aaKnown RBP20.38■□□□□ 0.85
TRPM1-211ENST00000560658 SLU7O95391 586 aaKnown RBP20.38■□□□□ 0.85
TRPM1-211ENST00000560658 GPTP24298 496 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 PHKA1P46020 1223 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 PARP10Q53GL7 1025 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 SHC4Q6S5L8 630 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 KRBA2Q6ZNG9 492 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 MFSD6Q6ZSS7 791 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 NOSTRINQ8IVI9 506 aa20.38■□□□□ 0.85
TRPM1-211ENST00000560658 ZNF397Q8NF99 534 aaPredicted RBP20.38■□□□□ 0.85
TRPM1-211ENST00000560658 CDC27P30260 824 aa20.37■□□□□ 0.85
TRPM1-211ENST00000560658 MICU3Q86XE3 530 aa20.37■□□□□ 0.85
TRPM1-211ENST00000560658 ITGB4P16144 1822 aa20.36■□□□□ 0.85
TRPM1-211ENST00000560658 UBN2Q6ZU65 1347 aa20.36■□□□□ 0.85
TRPM1-211ENST00000560658 PPFIA3O75145 1194 aa20.36■□□□□ 0.85
TRPM1-211ENST00000560658 DEXIO95424 95 aa20.36■□□□□ 0.85
TRPM1-211ENST00000560658 ARID5BQ14865 1188 aa20.36■□□□□ 0.85
TRPM1-211ENST00000560658 DZIP3Q86Y13 1208 aaKnown RBP20.36■□□□□ 0.85
TRPM1-211ENST00000560658 L2HGDHQ9H9P8 463 aa20.36■□□□□ 0.85
TRPM1-211ENST00000560658 KCNH3Q9ULD8 1083 aa20.36■□□□□ 0.85
TRPM1-211ENST00000560658 WWC3Q9ULE0 1092 aa20.36■□□□□ 0.85
TRPM1-211ENST00000560658 GOLGA6L9A6NEM1 432 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 MMP1P03956 469 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 MARCKSP29966 332 aaPredicted RBP20.35■□□□□ 0.85
TRPM1-211ENST00000560658 MLKLQ8NB16 471 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 CNNM3Q8NE01 707 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 ZNF592Q92610 1267 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 SRRTQ9BXP5 876 aaKnown RBP20.35■□□□□ 0.85
TRPM1-211ENST00000560658 FAM217BQ9NTX9 383 aaPredicted RBP20.35■□□□□ 0.85
TRPM1-211ENST00000560658 COL14A1Q05707 1796 aaKnown RBP20.35■□□□□ 0.85
TRPM1-211ENST00000560658 MBD4O95243 580 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 PCP11498 1178 aaKnown RBP20.35■□□□□ 0.85
TRPM1-211ENST00000560658 DMTNQ08495 405 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 RTN1Q16799 776 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 ARMCX5Q6P1M9 558 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 MPHOSPH8Q99549 860 aa20.35■□□□□ 0.85
TRPM1-211ENST00000560658 CDCA7Q9BWT1 371 aaPredicted RBP20.35■□□□□ 0.85
TRPM1-211ENST00000560658 PHLPP2Q6ZVD8 1323 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 USP27XA6NNY8 438 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 RANBP6O60518 1105 aaKnown RBP20.34■□□□□ 0.85
TRPM1-211ENST00000560658 BMP15O95972 392 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 XBP1P17861 261 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 PTPREP23469 700 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 UBASH3AP57075 661 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 WTAPQ15007 396 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 NT5DC1Q5TFE4 455 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 E4F1Q66K89 784 aaPredicted RBP20.34■□□□□ 0.85
TRPM1-211ENST00000560658 MAGEB6Q8N7X4 407 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 PPP1R13BQ96KQ4 1090 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 SLC26A6Q9BXS9 759 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 ZSWIM5Q9P217 1185 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 ZBTB1Q9Y2K1 713 aa20.34■□□□□ 0.85
TRPM1-211ENST00000560658 NUP98P52948 1817 aa20.33■□□□□ 0.85
TRPM1-211ENST00000560658 BIN1O00499 593 aa20.33■□□□□ 0.84
TRPM1-211ENST00000560658 ZSCAN12O43309 604 aa20.33■□□□□ 0.84
TRPM1-211ENST00000560658 SERPINC1P01008 464 aa20.33■□□□□ 0.84
TRPM1-211ENST00000560658 CCDC152Q4G0S7 254 aa20.33■□□□□ 0.84
TRPM1-211ENST00000560658 VSTM4Q8IW00 320 aa20.33■□□□□ 0.84
TRPM1-211ENST00000560658 ERCC4Q92889 916 aaPredicted RBP20.33■□□□□ 0.84
TRPM1-211ENST00000560658 PHKBQ93100 1093 aa20.33■□□□□ 0.84
TRPM1-211ENST00000560658 CDC5LQ99459 802 aaKnown RBP20.33■□□□□ 0.84
TRPM1-211ENST00000560658 EPB41L4AQ9HCS5 686 aaPredicted RBP20.33■□□□□ 0.84
TRPM1-211ENST00000560658 ANAPC4Q9UJX5 808 aa20.33■□□□□ 0.84
TRPM1-211ENST00000560658 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.33■□□□□ 0.84
TRPM1-211ENST00000560658 GSG1L2A8MUP6 293 aa20.32■□□□□ 0.84
TRPM1-211ENST00000560658 FAM193AP78312 1265 aa20.32■□□□□ 0.84
TRPM1-211ENST00000560658 RAB11FIP4Q86YS3 637 aa20.32■□□□□ 0.84
TRPM1-211ENST00000560658 UTP14AQ9BVJ6 771 aaKnown RBP20.32■□□□□ 0.84
TRPM1-211ENST00000560658 TMX1Q9H3N1 280 aa20.32■□□□□ 0.84
TRPM1-211ENST00000560658 GJB4Q9NTQ9 266 aa20.32■□□□□ 0.84
TRPM1-211ENST00000560658 DDX41Q9UJV9 622 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms