RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 USP8P40818 1118 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 PDE4BQ07343 736 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 PNOCQ13519 176 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 CWF19L2Q2TBE0 894 aaKnown RBP18.3■□□□□ 0.52
PBX1-219ENST00000560641 SPATA20Q8TB22 786 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 NFAT5O94916 1531 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 C5P01031 1676 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 CCDC172P0C7W6 258 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 ADKP55263 362 aaKnown RBP18.3■□□□□ 0.52
PBX1-219ENST00000560641 MORC3Q14149 939 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 RAD9BQ6WBX8 426 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 SECISBP2LQ93073 1101 aaKnown RBP18.3■□□□□ 0.52
PBX1-219ENST00000560641 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
PBX1-219ENST00000560641 HOOK1Q9UJC3 728 aaKnown RBP18.3■□□□□ 0.52
PBX1-219ENST00000560641 MAP9Q49MG5 647 aa18.29■□□□□ 0.52
PBX1-219ENST00000560641 CCDC102BQ68D86 513 aa18.29■□□□□ 0.52
PBX1-219ENST00000560641 DDX58O95786 925 aaKnown RBP18.29■□□□□ 0.52
PBX1-219ENST00000560641 CNPY4Q8N129 248 aa18.29■□□□□ 0.52
PBX1-219ENST00000560641 STAG1Q8WVM7 1258 aa18.29■□□□□ 0.52
PBX1-219ENST00000560641 RUBCNQ92622 972 aa18.29■□□□□ 0.52
PBX1-219ENST00000560641 NAPGQ99747 312 aaPredicted RBP18.29■□□□□ 0.52
PBX1-219ENST00000560641 HPCAL4Q9UM19 191 aa18.29■□□□□ 0.52
PBX1-219ENST00000560641 CDC27P30260 824 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 TEX13AQ9BXU3 409 aaPredicted RBP18.28■□□□□ 0.52
PBX1-219ENST00000560641 PCDHA5Q9Y5H7 936 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 HSPD1P10809 573 aaKnown RBP18.28■□□□□ 0.52
PBX1-219ENST00000560641 FOSBP53539 338 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 DDR1Q08345 913 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 KARSQ15046 597 aaKnown RBP18.28■□□□□ 0.52
PBX1-219ENST00000560641 CXorf56Q9H5V9 222 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 SUGCTQ9HAC7 445 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 CEP83Q9Y592 693 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 KIF4BQ2VIQ3 1234 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 RPGRIP1Q96KN7 1286 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 DESI2Q9BSY9 194 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 GPR108Q9NPR9 543 aa18.28■□□□□ 0.52
PBX1-219ENST00000560641 PUF60Q9UHX1 559 aaKnown RBP18.28■□□□□ 0.52
PBX1-219ENST00000560641 TMEM2Q9UHN6 1383 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 A6NNZ2 444 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 EXOC5O00471 708 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 IGKV5-2P06315 115 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 TUBB8Q3ZCM7 444 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 CCDC102AQ96A19 550 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 MAN1B1Q9UKM7 699 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 CPDO75976 1380 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 SOWAHDA6NJG2 315 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 ERLIN2O94905 339 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
PBX1-219ENST00000560641 USP14P54578 494 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 GBP6Q6ZN66 633 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 ZNF662Q6ZS27 426 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 IRX2Q9BZI1 471 aaPredicted RBP18.27■□□□□ 0.52
PBX1-219ENST00000560641 NFE2L3Q9Y4A8 694 aa18.27■□□□□ 0.52
PBX1-219ENST00000560641 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.51
PBX1-219ENST00000560641 PTPN12Q05209 780 aaKnown RBP18.27■□□□□ 0.51
PBX1-219ENST00000560641 PAGR1Q9BTK6 254 aa18.27■□□□□ 0.51
PBX1-219ENST00000560641 DDX21Q9NR30 783 aaKnown RBP eCLIP18.27■□□□□ 0.51
PBX1-219ENST00000560641 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 ARFGEF2Q9Y6D5 1785 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 MFAP3LO75121 409 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 MTF1Q14872 753 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 COG1Q8WTW3 980 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.26■□□□□ 0.51
PBX1-219ENST00000560641 XAGE2Q96GT9 111 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 KCNQ3O43525 872 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 LONRF3Q496Y0 759 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 PRPF38AQ8NAV1 312 aaKnown RBP18.26■□□□□ 0.51
PBX1-219ENST00000560641 KAT2BQ92831 832 aa18.26■□□□□ 0.51
PBX1-219ENST00000560641 ZNF622Q969S3 477 aaKnown RBP eCLIP18.26■□□□□ 0.51
PBX1-219ENST00000560641 C21orf2O43822 256 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 PLCD1P51178 756 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 FMR1Q06787 632 aaKnown RBP eCLIP18.25■□□□□ 0.51
PBX1-219ENST00000560641 PROSER3Q2NL68 480 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 MB21D2Q8IYB1 491 aaPredicted RBP18.25■□□□□ 0.51
PBX1-219ENST00000560641 PDILTQ8N807 584 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 KCNH3Q9ULD8 1083 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 ARHGAP25P42331 645 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 ZNF569Q5MCW4 686 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 TRAPPC11Q7Z392 1133 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 CNGA4Q8IV77 575 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 MED15Q96RN5 788 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 LGR6Q9HBX8 967 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 TRDNQ13061 729 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 SPATS2Q86XZ4 545 aaKnown RBP18.25■□□□□ 0.51
PBX1-219ENST00000560641 SLC35F6Q8N357 371 aa18.25■□□□□ 0.51
PBX1-219ENST00000560641 ZNF579Q8NAF0 562 aaKnown RBP18.25■□□□□ 0.51
PBX1-219ENST00000560641 PDIA6Q15084 440 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 CDKAL1Q5VV42 579 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 MICALL1Q8N3F8 863 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 CCDC148Q8NFR7 591 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 CTAGE1Q96RT6 745 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 MYH7P12883 1935 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 HNRNPH1P31943 449 aaKnown RBP18.24■□□□□ 0.51
PBX1-219ENST00000560641 TEFQ10587 303 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 GCKRQ14397 625 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 KCNV1Q6PIU1 500 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms