RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 DDX4Q9NQI0 724 aaKnown RBP15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 SAGE1Q9NXZ1 904 aa15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 MYO5AQ9Y4I1 1855 aaKnown RBP15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 MAST2Q6P0Q8 1798 aa15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 GOLIM4O00461 696 aa15.78■□□□□ 0.12
CTDSPL2-209ENST00000560620 MAP4K4O95819 1239 aaPredicted RBP15.78■□□□□ 0.12
CTDSPL2-209ENST00000560620 PLCG2P16885 1265 aa15.78■□□□□ 0.12
CTDSPL2-209ENST00000560620 RHBDL3P58872 404 aa15.78■□□□□ 0.12
CTDSPL2-209ENST00000560620 MAGEB6Q8N7X4 407 aa15.78■□□□□ 0.12
CTDSPL2-209ENST00000560620 SH3RF3Q8TEJ3 882 aaPredicted RBP15.78■□□□□ 0.12
CTDSPL2-209ENST00000560620 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
CTDSPL2-209ENST00000560620 PCDHB15Q9Y5E8 787 aa15.78■□□□□ 0.12
CTDSPL2-209ENST00000560620 TBC1D8O95759 1140 aa15.77■□□□□ 0.12
CTDSPL2-209ENST00000560620 TM4SF4P48230 202 aa15.77■□□□□ 0.12
CTDSPL2-209ENST00000560620 INHBEP58166 350 aa15.77■□□□□ 0.12
CTDSPL2-209ENST00000560620 MIGA1Q8NAN2 632 aa15.77■□□□□ 0.12
CTDSPL2-209ENST00000560620 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
CTDSPL2-209ENST00000560620 BOLA2Q9H3K6 86 aa15.77■□□□□ 0.12
CTDSPL2-209ENST00000560620 DCTPP1Q9H773 170 aa15.77■□□□□ 0.12
CTDSPL2-209ENST00000560620 DOCK2Q92608 1830 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 DDTLA6NHG4 134 aaPredicted RBP15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 IGSF3O75054 1194 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 INPP5BP32019 993 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 GJA5P36382 358 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 OTUD7BQ6GQQ9 843 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 ADGRA1Q86SQ6 560 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 TGFBRAP1Q8WUH2 860 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 GPATCH3Q96I76 525 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 SNCAIPQ9Y6H5 919 aa15.76■□□□□ 0.11
CTDSPL2-209ENST00000560620 ALDH1A1P00352 501 aa15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 SLC9C2Q5TAH2 1124 aa15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 SH3BP5LQ7L8J4 393 aa15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 IFNL1Q8IU54 200 aa15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 OSBPL5Q9H0X9 879 aaPredicted RBP15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 PAG1Q9NWQ8 432 aa15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 CASP8AP2Q9UKL3 1982 aa15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
CTDSPL2-209ENST00000560620 SPDYE5A6NIY4 337 aa15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 ATP5JP18859 108 aa15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 USP5P45974 858 aa15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 GTF2A2P52657 109 aa15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 DYNLL1P63167 89 aaKnown RBP15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 MAPKAPK5Q8IW41 473 aa15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 EDC3Q96F86 508 aaKnown RBP15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
CTDSPL2-209ENST00000560620 CCL15-CCL14A0A0B4J2E2 113 aa15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 NPM3O75607 178 aaKnown RBP15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 CAPN15O75808 1086 aa15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 PPP4CP60510 307 aa15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 CCL15Q16663 113 aa15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 IFFO2Q5TF58 517 aa15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 CERS3Q8IU89 383 aa15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 PICK1Q9NRD5 415 aa15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 ECHDC1Q9NTX5 307 aa15.73■□□□□ 0.11
CTDSPL2-209ENST00000560620 FAM196BA6NMK8 535 aa15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 IRF6O14896 467 aa15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 SNAPC2Q13487 334 aa15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 HAUS7Q99871 368 aa15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 SAP30BPQ9UHR5 308 aaKnown RBP15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 ZNF112Q9UJU3 913 aa15.72■□□□□ 0.11
CTDSPL2-209ENST00000560620 FLT1P17948 1338 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 MAGEB6P1A0A0J9YX57 407 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 SLURP2P0DP57 97 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 CETPP11597 493 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 PDE6AP16499 860 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 PPATQ06203 517 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 PPIL2Q13356 520 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 TMED8Q6PL24 325 aaPredicted RBP15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 SCYL3Q8IZE3 742 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 CRACR2BQ8N4Y2 399 aaPredicted RBP15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 DHX36Q9H2U1 1008 aaKnown RBP15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 PALD1Q9ULE6 856 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 ATRNL1Q5VV63 1379 aa15.71■□□□□ 0.11
CTDSPL2-209ENST00000560620 ZNF532Q9HCE3 1301 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 PHF20L1A8MW92 1017 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 HLA-DOAP06340 250 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 DGKZQ13574 1117 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 NOL9Q5SY16 702 aaKnown RBP15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 ANKRD45Q5TZF3 282 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 TSHZ3Q63HK5 1081 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 BRI3BPQ8WY22 251 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 MS4A4AQ96JQ5 239 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 PI4KBQ9UBF8 816 aa15.7■□□□□ 0.1
CTDSPL2-209ENST00000560620 CTNND1O60716 968 aaKnown RBP15.69■□□□□ 0.1
CTDSPL2-209ENST00000560620 AAMPQ13685 434 aa15.69■□□□□ 0.1
CTDSPL2-209ENST00000560620 EXOC6Q8TAG9 804 aa15.69■□□□□ 0.1
CTDSPL2-209ENST00000560620 ZNF296Q8WUU4 475 aaPredicted RBP15.69■□□□□ 0.1
CTDSPL2-209ENST00000560620 PTPN18Q99952 460 aa15.69■□□□□ 0.1
CTDSPL2-209ENST00000560620 HERC5Q9UII4 1024 aaKnown RBP15.69■□□□□ 0.1
CTDSPL2-209ENST00000560620 ZHX2Q9Y6X8 837 aa15.69■□□□□ 0.1
CTDSPL2-209ENST00000560620 COL2A1P02458 1487 aaPredicted RBP15.69■□□□□ 0.1
CTDSPL2-209ENST00000560620 CDK5RAP2Q96SN8 1893 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 TESPA1A2RU30 521 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms