RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, human

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIF1-208	ENST00000560444	STYK1	Q6J9G0	422 aa		27.87	■■■□□ 2.05
PIF1-208	ENST00000560444	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.87	■■■□□ 2.05
PIF1-208	ENST00000560444	CNPY2	Q9Y2B0	182 aa		27.87	■■■□□ 2.05
PIF1-208	ENST00000560444	FAM205A	Q6ZU69	1335 aa		27.87	■■■□□ 2.05
PIF1-208	ENST00000560444	ERICH2	A1L162	156 aa		27.86	■■■□□ 2.05
PIF1-208	ENST00000560444	CPLX1	O14810	134 aa		27.86	■■■□□ 2.05
PIF1-208	ENST00000560444	APOA5	Q6Q788	366 aa		27.86	■■■□□ 2.05
PIF1-208	ENST00000560444	NOL10	Q9BSC4	688 aa	Known RBP	27.86	■■■□□ 2.05
PIF1-208	ENST00000560444	TOMM22	Q9NS69	142 aa		27.86	■■■□□ 2.05
PIF1-208	ENST00000560444	ARPP21	Q9UBL0	812 aa	Predicted RBP	27.86	■■■□□ 2.05
PIF1-208	ENST00000560444	LTBP1	Q14766	1721 aa		27.86	■■■□□ 2.05
PIF1-208	ENST00000560444	CCDC88A	Q3V6T2	1871 aa		27.86	■■■□□ 2.05
PIF1-208	ENST00000560444	KIAA1551	Q9HCM1	1747 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	NT5C2	P49902	561 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	RRP12	Q5JTH9	1297 aa	Known RBP	27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	NFXL1	Q6ZNB6	911 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	SLF2	Q8IX21	1173 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	USP17L12	C9JPN9	530 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	USP17L21	D6R901	530 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444		H0YIN7	160 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	CDKL5	O76039	1030 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	SLC3A2	P08195	630 aa	Known RBP	27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	METAP2	P50579	478 aa	Known RBP eCLIP	27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	DNM1	Q05193	864 aa	Known RBP	27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	L1TD1	Q5T7N2	865 aa	Known RBP	27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	CPLX2	Q6PUV4	134 aa	Known RBP	27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	SYNE3	Q6ZMZ3	975 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	C2CD5	Q86YS7	1000 aa		27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.85	■■■□□ 2.05
PIF1-208	ENST00000560444	FSD2	A1L4K1	749 aa		27.84	■■■□□ 2.05
PIF1-208	ENST00000560444	GOLGA6L3	A6NEY3	463 aa		27.84	■■■□□ 2.05
PIF1-208	ENST00000560444	CCDC69	A6NI79	296 aa		27.84	■■■□□ 2.05
PIF1-208	ENST00000560444	ZBTB43	O43298	467 aa		27.84	■■■□□ 2.05
PIF1-208	ENST00000560444	RCAN1	P53805	252 aa		27.84	■■■□□ 2.05
PIF1-208	ENST00000560444	KRT85	P78386	507 aa		27.84	■■■□□ 2.05
PIF1-208	ENST00000560444	DPP8	Q6V1X1	898 aa	Predicted RBP	27.84	■■■□□ 2.05
PIF1-208	ENST00000560444	SLC12A7	Q9Y666	1083 aa		27.84	■■■□□ 2.05
PIF1-208	ENST00000560444	FDPS	P14324	419 aa	Known RBP	27.83	■■■□□ 2.05
PIF1-208	ENST00000560444	SLC16A10	Q8TF71	515 aa		27.83	■■■□□ 2.05
PIF1-208	ENST00000560444	FAM163A	Q96GL9	167 aa	Predicted RBP	27.83	■■■□□ 2.05
PIF1-208	ENST00000560444	SUGT1	Q9Y2Z0	365 aa		27.83	■■■□□ 2.05
PIF1-208	ENST00000560444	WTAP	Q15007	396 aa		27.82	■■■□□ 2.04
PIF1-208	ENST00000560444	ZNF622	Q969S3	477 aa	Known RBP eCLIP	27.82	■■■□□ 2.04
PIF1-208	ENST00000560444	GDPD2	Q9HCC8	539 aa		27.82	■■■□□ 2.04
PIF1-208	ENST00000560444	MROH7-TTC4	A0A0A0MT08	1334 aa		27.82	■■■□□ 2.04
PIF1-208	ENST00000560444	UBE2H	P62256	183 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	REST	Q13127	1097 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	R3HDM1	Q15032	1099 aa	Known RBP	27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	CAVIN1	Q6NZI2	390 aa	Known RBP	27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	FERMT3	Q86UX7	667 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	EYA3	Q99504	573 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	UBAC1	Q9BSL1	405 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	NID2	Q14112	1375 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	ORC4	O43929	436 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	GRIK5	Q16478	980 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	MFSD14B	Q5SR56	506 aa		27.81	■■■□□ 2.04
PIF1-208	ENST00000560444	SCAND2P	Q9GZW5	306 aa	Predicted RBP	27.8	■■■□□ 2.04
PIF1-208	ENST00000560444	SENP2	Q9HC62	589 aa		27.8	■■■□□ 2.04
PIF1-208	ENST00000560444	ORC3	Q9UBD5	711 aa	Predicted RBP	27.8	■■■□□ 2.04
PIF1-208	ENST00000560444	MKRN1	Q9UHC7	482 aa	Known RBP	27.8	■■■□□ 2.04
PIF1-208	ENST00000560444	CHD4	Q14839	1912 aa		27.8	■■■□□ 2.04
PIF1-208	ENST00000560444	GPR75-ASB3	A0A0A6YYF3	556 aa		27.79	■■■□□ 2.04
PIF1-208	ENST00000560444	PLCG2	P16885	1265 aa		27.79	■■■□□ 2.04
PIF1-208	ENST00000560444	ILDR2	Q71H61	639 aa		27.79	■■■□□ 2.04
PIF1-208	ENST00000560444	CNKSR1	Q969H4	720 aa		27.79	■■■□□ 2.04
PIF1-208	ENST00000560444	SYAP1	Q96A49	352 aa	Predicted RBP	27.79	■■■□□ 2.04
PIF1-208	ENST00000560444	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.79	■■■□□ 2.04
PIF1-208	ENST00000560444	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
PIF1-208	ENST00000560444	ELP1	O95163	1332 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	GOLGA8A	A7E2F4	631 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	RIMBP2	O15034	1052 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	USP5	P45974	858 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	ZNF445	P59923	1031 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	DIXDC1	Q155Q3	683 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	CYP2D7	A0A087X1C5	515 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	FIBP	O43427	364 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	GADD45B	O75293	160 aa	Predicted RBP	27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	ZBTB7A	O95365	584 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	PDE4B	Q07343	736 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	PPP2R5B	Q15173	497 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	ATL3	Q6DD88	541 aa		27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	27.78	■■■□□ 2.04
PIF1-208	ENST00000560444	ADD1	P35611	737 aa	Known RBP	27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	SEC23A	Q15436	765 aa		27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	ZSCAN23	Q3MJ62	389 aa		27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	MICU3	Q86XE3	530 aa		27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	IQCA1	Q86XH1	822 aa		27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	AMOTL1	Q8IY63	956 aa		27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	STK11IP	Q8N1F8	1099 aa		27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	MCM9	Q9NXL9	1143 aa		27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	COL11A2	P13942	1736 aa	Predicted RBP	27.77	■■■□□ 2.04
PIF1-208	ENST00000560444	CCDC196	A0A1B0GTZ2	297 aa		27.76	■■■□□ 2.03
PIF1-208	ENST00000560444	GTF2I	P78347	998 aa		27.76	■■■□□ 2.03
PIF1-208	ENST00000560444	C8orf76	Q96K31	380 aa		27.76	■■■□□ 2.03
PIF1-208	ENST00000560444	CFAP45	Q9UL16	551 aa		27.76	■■■□□ 2.03
PIF1-208	ENST00000560444	GAK	O14976	1311 aa		27.75	■■■□□ 2.03
PIF1-208	ENST00000560444	CDC27	P30260	824 aa		27.75	■■■□□ 2.03
PIF1-208	ENST00000560444	C12orf60	Q5U649	245 aa		27.75	■■■□□ 2.03
PIF1-208	ENST00000560444	RAB11FIP4	Q86YS3	637 aa		27.75	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms