RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 OTUD5Q96G74 571 aa18.6■□□□□ 0.57
SNRPA1-210ENST00000560383 ZNF341Q9BYN7 854 aa18.6■□□□□ 0.57
SNRPA1-210ENST00000560383 CCDC8Q9H0W5 538 aaPredicted RBP18.6■□□□□ 0.57
SNRPA1-210ENST00000560383 RBBP6Q7Z6E9 1792 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-210ENST00000560383 BRCA2P51587 3418 aa18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 RFX7Q2KHR2 1363 aa18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 CCL15-CCL14A0A0B4J2E2 113 aa18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 RAB11FIP3O75154 756 aa18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 RRP1P56182 461 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 CCL15Q16663 113 aa18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 TBC1D9Q6ZT07 1266 aa18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 OTOP1Q7RTM1 612 aa18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 NSUN4Q96CB9 384 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 USP40Q9NVE5 1235 aa18.59■□□□□ 0.57
SNRPA1-210ENST00000560383 MROH7-TTC4A0A0A0MT08 1334 aa18.58■□□□□ 0.57
SNRPA1-210ENST00000560383 GPR75-ASB3A0A0A6YYF3 556 aa18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 SP3Q02447 781 aa18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 NFIAQ12857 509 aa18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 PPIL2Q13356 520 aa18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 ZKSCAN4Q969J2 545 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 IDI2Q9BXS1 227 aa18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 FAM198AQ9UFP1 575 aa18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 TRIM17Q9Y577 477 aa18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 PDE4DIPQ5VU43 2346 aa18.58■□□□□ 0.56
SNRPA1-210ENST00000560383 CYP2E1P05181 493 aaPredicted RBP18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 CETPP11597 493 aa18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 GSTO1P78417 241 aa18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 SNAPC2Q13487 334 aa18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 AACSQ86V21 672 aa18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 ZFYVE28Q9HCC9 887 aa18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 IL1RAPL2Q9NP60 686 aa18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 SNRKQ9NRH2 765 aa18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 ZNF112Q9UJU3 913 aa18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 MKI67P46013 3256 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-210ENST00000560383 ATRNL1Q5VV63 1379 aa18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 IRF6O14896 467 aa18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 WDHD1O75717 1129 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 MAP4K4O95819 1239 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 LDHCP07864 332 aa18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 PPATQ06203 517 aa18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 TAF1CQ15572 869 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 CLASRPQ8N2M8 674 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 CD99L2Q8TCZ2 262 aa18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 LRP2BPQ9P2M1 347 aa18.56■□□□□ 0.56
SNRPA1-210ENST00000560383 ENTPD3O75355 529 aa18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 NPM3O75607 178 aaKnown RBP18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 BTDP43251 543 aa18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 ZAP70P43403 619 aa18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 RHBDL3P58872 404 aa18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 TCP10Q12799 353 aa18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 NOL9Q5SY16 702 aaKnown RBP18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 FAM43AQ8N2R8 423 aa18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 RAI14Q9P0K7 980 aa18.55■□□□□ 0.56
SNRPA1-210ENST00000560383 ARHGEF6Q15052 776 aa18.54■□□□□ 0.56
SNRPA1-210ENST00000560383 MIGA2Q7L4E1 593 aa18.54■□□□□ 0.56
SNRPA1-210ENST00000560383 EFCC1Q9HA90 598 aa18.54■□□□□ 0.56
SNRPA1-210ENST00000560383 PTPN22Q9Y2R2 807 aa18.54■□□□□ 0.56
SNRPA1-210ENST00000560383 MAST2Q6P0Q8 1798 aa18.54■□□□□ 0.56
SNRPA1-210ENST00000560383 TLR2O60603 784 aa18.53■□□□□ 0.56
SNRPA1-210ENST00000560383 INPP5BP32019 993 aa18.53■□□□□ 0.56
SNRPA1-210ENST00000560383 RGS3P49796 1198 aa18.53■□□□□ 0.56
SNRPA1-210ENST00000560383 DOCK1Q14185 1865 aa18.53■□□□□ 0.56
SNRPA1-210ENST00000560383 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNRPA1-210ENST00000560383 PIH1D3Q9NQM4 214 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-210ENST00000560383 KCNH4Q9UQ05 1017 aa18.53■□□□□ 0.56
SNRPA1-210ENST00000560383 BTBD19C9JJ37 291 aa18.52■□□□□ 0.56
SNRPA1-210ENST00000560383 TMED8Q6PL24 325 aaPredicted RBP18.52■□□□□ 0.56
SNRPA1-210ENST00000560383 ZFPM1Q8IX07 1006 aa18.52■□□□□ 0.56
SNRPA1-210ENST00000560383 DCTPP1Q9H773 170 aa18.52■□□□□ 0.56
SNRPA1-210ENST00000560383 COL2A1P02458 1487 aaPredicted RBP18.52■□□□□ 0.55
SNRPA1-210ENST00000560383 APBB1O00213 710 aa18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 IFIT2P09913 472 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 HOXD11P31277 338 aaPredicted RBP18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 PPP4CP60510 307 aa18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 MAP3K10Q02779 954 aa18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 ARMC5Q96C12 935 aa18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 DDX4Q9NQI0 724 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 PCDHB15Q9Y5E8 787 aa18.51■□□□□ 0.55
SNRPA1-210ENST00000560383 CAP1Q01518 475 aa18.5■□□□□ 0.55
SNRPA1-210ENST00000560383 SH3BP5LQ7L8J4 393 aa18.5■□□□□ 0.55
SNRPA1-210ENST00000560383 ANKRD23Q86SG2 305 aa18.5■□□□□ 0.55
SNRPA1-210ENST00000560383 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
SNRPA1-210ENST00000560383 PTPRFP10586 1907 aa18.5■□□□□ 0.55
SNRPA1-210ENST00000560383 ADGRA1Q86SQ6 560 aa18.49■□□□□ 0.55
SNRPA1-210ENST00000560383 ANTXR1Q9H6X2 564 aa18.49■□□□□ 0.55
SNRPA1-210ENST00000560383 PHIPQ8WWQ0 1821 aa18.49■□□□□ 0.55
SNRPA1-210ENST00000560383 PHF20L1A8MW92 1017 aa18.48■□□□□ 0.55
SNRPA1-210ENST00000560383 BAG3O95817 575 aa18.48■□□□□ 0.55
SNRPA1-210ENST00000560383 GNRH1P01148 92 aa18.48■□□□□ 0.55
SNRPA1-210ENST00000560383 SCYL3Q8IZE3 742 aa18.48■□□□□ 0.55
SNRPA1-210ENST00000560383 NDUFB9Q9Y6M9 179 aa18.48■□□□□ 0.55
SNRPA1-210ENST00000560383 ZSWIM8A7E2V4 1837 aa18.48■□□□□ 0.55
SNRPA1-210ENST00000560383 DDTLA6NHG4 134 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 CXCL11O14625 94 aa18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 IDH1O75874 414 aaKnown RBP18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 PLCG2P16885 1265 aa18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 ATP5JP18859 108 aa18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 LACTBP83111 547 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms