RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RAB11FIP3O75154 756 aa14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 SREBF2Q12772 1141 aa14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 DCAF15Q66K64 600 aa14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 NAA16Q6N069 864 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 CLASRPQ8N2M8 674 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 SH3RF3Q8TEJ3 882 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 OTUD5Q96G74 571 aa14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 ZNF341Q9BYN7 854 aa14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 CSADQ9Y600 493 aa14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 SMARCA5O60264 1052 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 CAPN15O75808 1086 aa14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 IDH1O75874 414 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 IFNL1Q8IU54 200 aa14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 HOOK2Q96ED9 719 aa14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 MS4A4AQ96JQ5 239 aa14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 PTPN18Q99952 460 aa14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 AATFQ9NY61 560 aaKnown RBP eCLIP14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 ZNF112Q9UJU3 913 aa14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 PCDHB15Q9Y5E8 787 aa14.23□□□□□ -0.13
RABGGTA-216ENST00000560243 SPDYE5A6NIY4 337 aa14.22□□□□□ -0.13
RABGGTA-216ENST00000560243 IFIT2P09913 472 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-216ENST00000560243 TEX11Q8IYF3 940 aa14.22□□□□□ -0.13
RABGGTA-216ENST00000560243 CRBNQ96SW2 442 aa14.22□□□□□ -0.13
RABGGTA-216ENST00000560243 PHF20L1A8MW92 1017 aa14.21□□□□□ -0.13
RABGGTA-216ENST00000560243 CYP7A1P22680 504 aa14.21□□□□□ -0.13
RABGGTA-216ENST00000560243 DYNLL1P63167 89 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-216ENST00000560243 MAGEB6Q8N7X4 407 aa14.21□□□□□ -0.13
RABGGTA-216ENST00000560243 BRI3BPQ8WY22 251 aa14.21□□□□□ -0.13
RABGGTA-216ENST00000560243 EDC3Q96F86 508 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-216ENST00000560243 TESPA1A2RU30 521 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 FAM196BA6NMK8 535 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 IRF6O14896 467 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 INHBEP58166 350 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 PPP4CP60510 307 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 MAP3K10Q02779 954 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 ERO1BQ86YB8 467 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 MIGA1Q8NAN2 632 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 ZNF296Q8WUU4 475 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 DNAJC2Q99543 621 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 LRRCC1Q9C099 1032 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 OSBPL5Q9H0X9 879 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 DCTPP1Q9H773 170 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 FOCADQ5VW36 1801 aa14.2□□□□□ -0.14
RABGGTA-216ENST00000560243 CCL15-CCL14A0A0B4J2E2 113 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 GPR25O00155 361 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 GOLIM4O00461 696 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 BAG3O95817 575 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 MAP4K4O95819 1239 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 CCL15Q16663 113 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 MAPKAPK5Q8IW41 473 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 TGFBRAP1Q8WUH2 860 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 NOL10Q9BSC4 688 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 CFHR5Q9BXR6 569 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 BOLA2Q9H3K6 86 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 SIPA1L1O43166 1804 aa14.19□□□□□ -0.14
RABGGTA-216ENST00000560243 GTF2A2P52657 109 aa14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 MAP3K12Q12852 859 aa14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 PPIL2Q13356 520 aa14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 DGKZQ13574 1117 aa14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 NOL9Q5SY16 702 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 FAM43AQ8N2R8 423 aa14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 ABHD8Q96I13 439 aa14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 MCOLN1Q9GZU1 580 aa14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 COL2A1P02458 1487 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-216ENST00000560243 FLT1P17948 1338 aa14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 ALDH1A1P00352 501 aa14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 PLCG2P16885 1265 aa14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 ATP5JP18859 108 aa14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 PPATQ06203 517 aa14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 CRHR2Q13324 411 aa14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 SLFNL1Q499Z3 407 aa14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 SAP30BPQ9UHR5 308 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-216ENST00000560243 DOCK1Q14185 1865 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 IGSF3O75054 1194 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 CHGBP05060 677 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 PDE6AP16499 860 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 SNAPC2Q13487 334 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 TTF1Q15361 905 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 SLC4A8Q2Y0W8 1093 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 SLC9C2Q5TAH2 1124 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 SCYL3Q8IZE3 742 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 HAUS7Q99871 368 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 PAG1Q9NWQ8 432 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 PALD1Q9ULE6 856 aa14.16□□□□□ -0.14
RABGGTA-216ENST00000560243 PHIPQ8WWQ0 1821 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 TCRBV5S4A2TA0A5A2 114 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 BTBD19C9JJ37 291 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 TBC1D12O60347 775 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 CETPP11597 493 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 PTPRAP18433 802 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 MOGSQ13724 837 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms