RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 CETPP11597 493 aa28.5■■■□□ 2.15
CRNDE-209ENST00000560208 PPATQ06203 517 aa28.5■■■□□ 2.15
CRNDE-209ENST00000560208 SNAPC2Q13487 334 aa28.5■■■□□ 2.15
CRNDE-209ENST00000560208 CEP85Q6P2H3 762 aa28.5■■■□□ 2.15
CRNDE-209ENST00000560208 FBXO46Q6PJ61 603 aaPredicted RBP28.5■■■□□ 2.15
CRNDE-209ENST00000560208 FAM43AQ8N2R8 423 aa28.5■■■□□ 2.15
CRNDE-209ENST00000560208 NSUN4Q96CB9 384 aaKnown RBP28.5■■■□□ 2.15
CRNDE-209ENST00000560208 MLLT1Q03111 559 aaPredicted RBP28.49■■■□□ 2.15
CRNDE-209ENST00000560208 TAF1CQ15572 869 aaPredicted RBP28.49■■■□□ 2.15
CRNDE-209ENST00000560208 ZSCAN29Q8IWY8 852 aaPredicted RBP28.49■■■□□ 2.15
CRNDE-209ENST00000560208 DDX4Q9NQI0 724 aaKnown RBP28.49■■■□□ 2.15
CRNDE-209ENST00000560208 SNRKQ9NRH2 765 aa28.49■■■□□ 2.15
CRNDE-209ENST00000560208 ZBTB40Q9NUA8 1239 aa28.49■■■□□ 2.15
CRNDE-209ENST00000560208 LRP2BPQ9P2M1 347 aa28.49■■■□□ 2.15
CRNDE-209ENST00000560208 RHBDL3P58872 404 aa28.48■■■□□ 2.15
CRNDE-209ENST00000560208 PICALMQ13492 652 aa28.48■■■□□ 2.15
CRNDE-209ENST00000560208 SH3BP5LQ7L8J4 393 aa28.48■■■□□ 2.15
CRNDE-209ENST00000560208 ERO1AQ96HE7 468 aa28.48■■■□□ 2.15
CRNDE-209ENST00000560208 ZFYVE28Q9HCC9 887 aa28.48■■■□□ 2.15
CRNDE-209ENST00000560208 TRIM17Q9Y577 477 aa28.48■■■□□ 2.15
CRNDE-209ENST00000560208 SP3Q02447 781 aa28.47■■■□□ 2.15
CRNDE-209ENST00000560208 NOL9Q5SY16 702 aaKnown RBP28.47■■■□□ 2.15
CRNDE-209ENST00000560208 ATRNL1Q5VV63 1379 aa28.47■■■□□ 2.15
CRNDE-209ENST00000560208 DDTLA6NHG4 134 aaPredicted RBP28.46■■■□□ 2.15
CRNDE-209ENST00000560208 OTOP1Q7RTM1 612 aa28.46■■■□□ 2.15
CRNDE-209ENST00000560208 CD99L2Q8TCZ2 262 aa28.46■■■□□ 2.15
CRNDE-209ENST00000560208 MYO5AQ9Y4I1 1855 aaKnown RBP28.46■■■□□ 2.15
CRNDE-209ENST00000560208 SOX10P56693 466 aa28.45■■■□□ 2.14
CRNDE-209ENST00000560208 ZNF512BQ96KM6 892 aaPredicted RBP28.45■■■□□ 2.14
CRNDE-209ENST00000560208 SUPT16HQ9Y5B9 1047 aaKnown RBP28.45■■■□□ 2.14
CRNDE-209ENST00000560208 PHF20L1A8MW92 1017 aa28.44■■■□□ 2.14
CRNDE-209ENST00000560208 BTBD19C9JJ37 291 aa28.44■■■□□ 2.14
CRNDE-209ENST00000560208 MAP4K4O95819 1239 aaPredicted RBP28.44■■■□□ 2.14
CRNDE-209ENST00000560208 MAP3K10Q02779 954 aa28.44■■■□□ 2.14
CRNDE-209ENST00000560208 EAF2Q96CJ1 260 aaPredicted RBP28.44■■■□□ 2.14
CRNDE-209ENST00000560208 CRBNQ96SW2 442 aa28.44■■■□□ 2.14
CRNDE-209ENST00000560208 CCDC8Q9H0W5 538 aaPredicted RBP28.44■■■□□ 2.14
CRNDE-209ENST00000560208 ZCCHC17Q9NP64 241 aaKnown RBP28.44■■■□□ 2.14
CRNDE-209ENST00000560208 DBNLQ9UJU6 430 aaKnown RBP28.44■■■□□ 2.14
CRNDE-209ENST00000560208 NPM3O75607 178 aaKnown RBP28.43■■■□□ 2.14
CRNDE-209ENST00000560208 TLR7Q9NYK1 1049 aaKnown RBP28.43■■■□□ 2.14
CRNDE-209ENST00000560208 KCNH4Q9UQ05 1017 aa28.43■■■□□ 2.14
CRNDE-209ENST00000560208 EXOC6BQ9Y2D4 811 aa28.43■■■□□ 2.14
CRNDE-209ENST00000560208 HTTP42858 3142 aa28.43■■■□□ 2.14
CRNDE-209ENST00000560208 CYP2E1P05181 493 aaPredicted RBP28.42■■■□□ 2.14
CRNDE-209ENST00000560208 TNRC18O15417 2968 aaPredicted RBP28.41■■■□□ 2.14
CRNDE-209ENST00000560208 SLURP2P0DP57 97 aa28.41■■■□□ 2.14
CRNDE-209ENST00000560208 NAA16Q6N069 864 aaPredicted RBP28.41■■■□□ 2.14
CRNDE-209ENST00000560208 ERC1Q8IUD2 1116 aa28.41■■■□□ 2.14
CRNDE-209ENST00000560208 NOL10Q9BSC4 688 aaKnown RBP28.41■■■□□ 2.14
CRNDE-209ENST00000560208 EFCC1Q9HA90 598 aa28.41■■■□□ 2.14
CRNDE-209ENST00000560208 MAST2Q6P0Q8 1798 aa28.41■■■□□ 2.14
CRNDE-209ENST00000560208 ZAP70P43403 619 aa28.4■■■□□ 2.14
CRNDE-209ENST00000560208 RPAP2Q8IXW5 612 aaPredicted RBP28.4■■■□□ 2.14
CRNDE-209ENST00000560208 SCYL3Q8IZE3 742 aa28.4■■■□□ 2.14
CRNDE-209ENST00000560208 PICK1Q9NRD5 415 aa28.4■■■□□ 2.14
CRNDE-209ENST00000560208 TLR2O60603 784 aa28.39■■■□□ 2.14
CRNDE-209ENST00000560208 CAP1Q01518 475 aa28.39■■■□□ 2.14
CRNDE-209ENST00000560208 TEX11Q8IYF3 940 aa28.39■■■□□ 2.14
CRNDE-209ENST00000560208 HSP90AB4PQ58FF6 505 aa28.38■■■□□ 2.13
CRNDE-209ENST00000560208 ANKRD23Q86SG2 305 aa28.38■■■□□ 2.13
CRNDE-209ENST00000560208 SH3RF3Q8TEJ3 882 aaPredicted RBP28.38■■■□□ 2.13
CRNDE-209ENST00000560208 PTPN22Q9Y2R2 807 aa28.38■■■□□ 2.13
CRNDE-209ENST00000560208 DOCK1Q14185 1865 aa28.38■■■□□ 2.13
CRNDE-209ENST00000560208 CXCL11O14625 94 aa28.37■■■□□ 2.13
CRNDE-209ENST00000560208 TBC1D12O60347 775 aa28.37■■■□□ 2.13
CRNDE-209ENST00000560208 CTNND1O60716 968 aaKnown RBP28.37■■■□□ 2.13
CRNDE-209ENST00000560208 BAG3O95817 575 aa28.37■■■□□ 2.13
CRNDE-209ENST00000560208 PTPRAP18433 802 aa28.37■■■□□ 2.13
CRNDE-209ENST00000560208 ARHGEF6Q15052 776 aa28.37■■■□□ 2.13
CRNDE-209ENST00000560208 SIRT2Q8IXJ6 389 aa28.37■■■□□ 2.13
CRNDE-209ENST00000560208 OSBPL5Q9H0X9 879 aaPredicted RBP28.37■■■□□ 2.13
CRNDE-209ENST00000560208 PIH1D3Q9NQM4 214 aaKnown RBP28.37■■■□□ 2.13
CRNDE-209ENST00000560208 AATFQ9NY61 560 aaKnown RBP eCLIP28.37■■■□□ 2.13
CRNDE-209ENST00000560208 ZHX2Q9Y6X8 837 aa28.37■■■□□ 2.13
CRNDE-209ENST00000560208 HMMRO75330 724 aa28.36■■■□□ 2.13
CRNDE-209ENST00000560208 MOGSQ13724 837 aa28.36■■■□□ 2.13
CRNDE-209ENST00000560208 AACSQ86V21 672 aa28.36■■■□□ 2.13
CRNDE-209ENST00000560208 CDK5RAP2Q96SN8 1893 aa28.36■■■□□ 2.13
CRNDE-209ENST00000560208 COL2A1P02458 1487 aaPredicted RBP28.35■■■□□ 2.13
CRNDE-209ENST00000560208 CENPFP49454 3210 aa28.35■■■□□ 2.13
CRNDE-209ENST00000560208 PDHXO00330 501 aa28.35■■■□□ 2.13
CRNDE-209ENST00000560208 IGSF3O75054 1194 aa28.35■■■□□ 2.13
CRNDE-209ENST00000560208 PLCG2P16885 1265 aa28.35■■■□□ 2.13
CRNDE-209ENST00000560208 PPP4CP60510 307 aa28.35■■■□□ 2.13
CRNDE-209ENST00000560208 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.35■■■□□ 2.13
CRNDE-209ENST00000560208 PHIPQ8WWQ0 1821 aa28.34■■■□□ 2.13
CRNDE-209ENST00000560208 FAM196BA6NMK8 535 aa28.34■■■□□ 2.13
CRNDE-209ENST00000560208 ADGRA1Q86SQ6 560 aa28.34■■■□□ 2.13
CRNDE-209ENST00000560208 RHPN1Q8TCX5 695 aa28.34■■■□□ 2.13
CRNDE-209ENST00000560208 IL1RAPL2Q9NP60 686 aa28.34■■■□□ 2.13
CRNDE-209ENST00000560208 AFG3L2Q9Y4W6 797 aa28.33■■■□□ 2.13
CRNDE-209ENST00000560208 PTPRFP10586 1907 aa28.33■■■□□ 2.13
CRNDE-209ENST00000560208 APBB1O00213 710 aa28.32■■■□□ 2.12
CRNDE-209ENST00000560208 FOCADQ5VW36 1801 aa28.32■■■□□ 2.12
CRNDE-209ENST00000560208 IDH1O75874 414 aaKnown RBP28.31■■■□□ 2.12
CRNDE-209ENST00000560208 KIF22Q14807 665 aa28.31■■■□□ 2.12
CRNDE-209ENST00000560208 GPAT2Q6NUI2 795 aa28.31■■■□□ 2.12
CRNDE-209ENST00000560208 C17orf99Q6UX52 265 aa28.31■■■□□ 2.12
CRNDE-209ENST00000560208 TGFBRAP1Q8WUH2 860 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms