RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 MAP3K9P80192 1104 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 KIF23Q02241 960 aaPredicted RBP10.36□□□□□ -0.75
USP3-217ENST00000560070 NUCB1Q02818 461 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 SMC5Q8IY18 1101 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 ARMT1Q9H993 441 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 ELP3Q9H9T3 547 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 FAM196BA6NMK8 535 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 HAX1O00165 279 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 PRKAB2O43741 272 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 ENTPD3O75355 529 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 GLRX3O76003 335 aaKnown RBP10.35□□□□□ -0.75
USP3-217ENST00000560070 PDE1AP54750 535 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 LDLRAD1Q5T700 205 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 PI4K2BQ8TCG2 481 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 ZKSCAN4Q969J2 545 aaPredicted RBP10.35□□□□□ -0.75
USP3-217ENST00000560070 WRNIP1Q96S55 665 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 CSRNP1Q96S65 589 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.35□□□□□ -0.751e-6■■■■□ 21.2
USP3-217ENST00000560070 PALD1Q9ULE6 856 aa10.35□□□□□ -0.75
USP3-217ENST00000560070 ADAMTSL1Q8N6G6 1762 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 TCRBV5S4A2TA0A5A2 114 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 FAM155AB1AL88 458 aaPredicted RBP10.34□□□□□ -0.75
USP3-217ENST00000560070 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 NEFLP07196 543 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 HSPA1AP0DMV8 641 aaKnown RBP10.34□□□□□ -0.75
USP3-217ENST00000560070 HSPA1BP0DMV9 641 aaKnown RBP10.34□□□□□ -0.75
USP3-217ENST00000560070 PLCG2P16885 1265 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 INPP5BP32019 993 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 ADD2P35612 726 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 DCAF15Q66K64 600 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 ZSCAN25Q6NSZ9 544 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 RASAL3Q86YV0 1011 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 ANKRD13AQ8IZ07 590 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 LCORLQ8N3X6 602 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 JMYQ8N9B5 988 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 RILPL2Q969X0 211 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 HOOK2Q96ED9 719 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 HHIPL1Q96JK4 782 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 ZNF341Q9BYN7 854 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 OSBPL5Q9H0X9 879 aaPredicted RBP10.34□□□□□ -0.75
USP3-217ENST00000560070 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.34□□□□□ -0.75
USP3-217ENST00000560070 STAP2Q9UGK3 403 aa10.34□□□□□ -0.75
USP3-217ENST00000560070 TTC41PQ6P2S7 1318 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 RNF113AO15541 343 aaKnown RBP10.33□□□□□ -0.76
USP3-217ENST00000560070 MBD4O95243 580 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 SLC10A3P09131 477 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 NOGQ13253 232 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 VGLL4Q14135 290 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 MAP3K11Q16584 847 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.33□□□□□ -0.76
USP3-217ENST00000560070 PLEKHM2Q8IWE5 1019 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 KBTBD3Q8NAB2 608 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 SDR42E1Q8WUS8 393 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 RIOK1Q9BRS2 568 aaKnown RBP10.33□□□□□ -0.76
USP3-217ENST00000560070 FSD1Q9BTV5 496 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 CRNKL1Q9BZJ0 848 aaKnown RBP10.33□□□□□ -0.76
USP3-217ENST00000560070 PUS7LQ9H0K6 701 aaKnown RBP10.33□□□□□ -0.76
USP3-217ENST00000560070 TSKSQ9UJT2 592 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 CSADQ9Y600 493 aa10.33□□□□□ -0.76
USP3-217ENST00000560070 POLR3DP05423 398 aaPredicted RBP10.32□□□□□ -0.76
USP3-217ENST00000560070 PDE4AP27815 886 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 GJA5P36382 358 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 MAP2K2P36507 400 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 MAP2K1Q02750 393 aaPredicted RBP10.32□□□□□ -0.76
USP3-217ENST00000560070 SPRYD7Q5W111 196 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 SKAP1Q86WV1 359 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP3-217ENST00000560070 OSBP2Q969R2 916 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 AIDAQ96BJ3 306 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 OPTNQ96CV9 577 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 OTUD5Q96G74 571 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 SEC62Q99442 399 aaKnown RBP10.32□□□□□ -0.76
USP3-217ENST00000560070 BEGAINQ9BUH8 593 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 TRIM34Q9BYJ4 488 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 SLC4A4Q9Y6R1 1079 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 FLT1P17948 1338 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 SALL3Q9BXA9 1300 aa10.32□□□□□ -0.76
USP3-217ENST00000560070 SSC5DA1L4H1 1573 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 FOXN1O15353 648 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 IGSF3O75054 1194 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 TRPA1O75762 1119 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 CYP2D6P10635 497 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 EVX2Q03828 476 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 UBE3CQ15386 1083 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 CCDC84Q86UT8 332 aaPredicted RBP10.31□□□□□ -0.76
USP3-217ENST00000560070 STK11IPQ8N1F8 1099 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 CRACR2BQ8N4Y2 399 aaPredicted RBP10.31□□□□□ -0.76
USP3-217ENST00000560070 WNK4Q96J92 1243 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 WBP1LQ9NX94 342 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
USP3-217ENST00000560070 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.31□□□□□ -0.76
USP3-217ENST00000560070 A0A1B0GUL6 1792 aa10.3□□□□□ -0.76
USP3-217ENST00000560070 PHF20L1A8MW92 1017 aa10.3□□□□□ -0.76
USP3-217ENST00000560070 M0R2C6 588 aa10.3□□□□□ -0.76
USP3-217ENST00000560070 APPP05067 770 aa10.3□□□□□ -0.76
USP3-217ENST00000560070 HLA-DOAP06340 250 aa10.3□□□□□ -0.76
USP3-217ENST00000560070 PLCD1P51178 756 aa10.3□□□□□ -0.76
USP3-217ENST00000560070 RRP1BQ14684 758 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms