RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 SLC4A4Q9Y6R1 1079 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 TNRC6CQ9HCJ0 1690 aaKnown RBP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 UBR3Q6ZT12 1888 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 MAGEB6P1A0A0J9YX57 407 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 CCDC196A0A1B0GTZ2 297 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 ERICH2A1L162 156 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 IFIT3O14879 490 aaKnown RBP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 KCNQ2O43526 872 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 CYP7A1P22680 504 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 U2AF2P26368 475 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 CEBPZQ03701 1054 aaKnown RBP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 TRIM29Q14134 588 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 SLC39A14Q15043 492 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 FAM98CQ17RN3 349 aaKnown RBP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 ANO1Q5XXA6 986 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 KRT40Q6A162 431 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 NFXL1Q6ZNB6 911 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 PLA2G4DQ86XP0 818 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 LCORLQ8N3X6 602 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 TIGD1Q96MW7 591 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 BRIP1Q9BX63 1249 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 ANKRD2Q9GZV1 360 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 SLC12A7Q9Y666 1083 aa9.39□□□□□ -0.91
SMAD3-212ENST00000559937 COL1A1P02452 1464 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-212ENST00000559937 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 CDK5RAP2Q96SN8 1893 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 FAM237AA0A1B0GTK4 181 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 AP5Z1O43299 807 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 PPP6R2O75170 966 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 CMA1P23946 247 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 CDC27P30260 824 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 ZNF75DP51815 510 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 CTDSPL2Q05D32 466 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 PPARAQ07869 468 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 WTAPQ15007 396 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 IQCB1Q15051 598 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 FBXO33Q7Z6M2 555 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 CEP57L1Q8IYX8 460 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 BPIFA3Q9BQP9 254 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 FTOQ9C0B1 505 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMAD3-212ENST00000559937 NAT10Q9H0A0 1025 aaKnown RBP9.38□□□□□ -0.91
SMAD3-212ENST00000559937 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-212ENST00000559937 SPTLC3Q9NUV7 552 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 ZSWIM5Q9P217 1185 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 MINPP1Q9UNW1 487 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 CLIC4Q9Y696 253 aa9.38□□□□□ -0.91
SMAD3-212ENST00000559937 MORC2Q9Y6X9 1032 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-212ENST00000559937 KIF28PB7ZC32 967 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 GOLGA6L19H0YKK7 550 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 SNAP23O00161 211 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 CUTAO60888 179 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 FGRP09769 529 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 RPS8P62241 208 aaKnown RBP9.37□□□□□ -0.91
SMAD3-212ENST00000559937 RTN1Q16799 776 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 AXDND1Q5T1B0 1012 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-212ENST00000559937 TBC1D9BQ66K14 1250 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 LUZP1Q86V48 1076 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 MICU3Q86XE3 530 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 VPS37DQ86XT2 251 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 ELOA2Q8IYF1 753 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-212ENST00000559937 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 ESR2Q92731 530 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 MRFAP1L1Q96HT8 127 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 NLRP3Q96P20 1036 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 RIOK1Q9BRS2 568 aaKnown RBP9.37□□□□□ -0.91
SMAD3-212ENST00000559937 NOL10Q9BSC4 688 aaKnown RBP9.37□□□□□ -0.91
SMAD3-212ENST00000559937 DNAJC25Q9H1X3 360 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.37□□□□□ -0.91
SMAD3-212ENST00000559937 TACC3Q9Y6A5 838 aa9.37□□□□□ -0.91
SMAD3-212ENST00000559937 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 PRKAB2O43741 272 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 RANBP6O60518 1105 aaKnown RBP9.36□□□□□ -0.91
SMAD3-212ENST00000559937 ZPR1O75312 459 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 DEXIO95424 95 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 GTF2E1P29083 439 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-212ENST00000559937 GYG1P46976 350 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 GNL2Q13823 731 aaKnown RBP9.36□□□□□ -0.91
SMAD3-212ENST00000559937 DHX8Q14562 1220 aaKnown RBP9.36□□□□□ -0.91
SMAD3-212ENST00000559937 PTPAQ15257 358 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 SAFBQ15424 915 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMAD3-212ENST00000559937 SEC23AQ15436 765 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 OTUD7BQ6GQQ9 843 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 TPTE2Q6XPS3 522 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 DEFB132Q7Z7B7 95 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 ZNF654Q8IZM8 581 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 FAM84BQ96KN1 310 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-212ENST00000559937 SETDB2Q96T68 719 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 RNF26Q9BY78 433 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-212ENST00000559937 TRIM5Q9C035 493 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 SENP2Q9HC62 589 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 RAI14Q9P0K7 980 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
SMAD3-212ENST00000559937 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
SMAD3-212ENST00000559937 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms