RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 MAST2Q6P0Q8 1798 aa20.93■□□□□ 0.94
SNX1-208ENST00000559844 FKBP1AP62942 108 aaKnown RBP20.93■□□□□ 0.94
SNX1-208ENST00000559844 GRIK5Q16478 980 aa20.93■□□□□ 0.94
SNX1-208ENST00000559844 CHAMP1Q96JM3 812 aa20.93■□□□□ 0.94
SNX1-208ENST00000559844 LDHBP07195 334 aaKnown RBP20.92■□□□□ 0.94
SNX1-208ENST00000559844 CAVIN1Q6NZI2 390 aaKnown RBP20.92■□□□□ 0.94
SNX1-208ENST00000559844 GPC2Q8N158 579 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 RAI14Q9P0K7 980 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 WDR19Q8NEZ3 1342 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 MYO3BQ8WXR4 1341 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 MYH2Q9UKX2 1941 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 VPS37CA5D8V6 355 aaPredicted RBP20.92■□□□□ 0.94
SNX1-208ENST00000559844 F8W031 263 aaPredicted RBP20.92■□□□□ 0.94
SNX1-208ENST00000559844 ZNF445P59923 1031 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 SPTY2D1Q68D10 685 aaPredicted RBP20.92■□□□□ 0.94
SNX1-208ENST00000559844 KIAA0825Q8IV33 1275 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 NCOA7Q8NI08 942 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 AIDAQ96BJ3 306 aa20.92■□□□□ 0.94
SNX1-208ENST00000559844 ZNF274Q96GC6 653 aaPredicted RBP20.92■□□□□ 0.94
SNX1-208ENST00000559844 LRRC2Q9BYS8 371 aa20.91■□□□□ 0.94
SNX1-208ENST00000559844 GRPEL1Q9HAV7 217 aa20.91■□□□□ 0.94
SNX1-208ENST00000559844 ZMYM6O95789 1325 aa20.91■□□□□ 0.94
SNX1-208ENST00000559844 DDNO94850 711 aaPredicted RBP20.9■□□□□ 0.94
SNX1-208ENST00000559844 MCM5P33992 734 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 ALX1Q15699 326 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 DPY19L2Q6NUT2 758 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 RALYLQ86SE5 291 aaKnown RBP20.9■□□□□ 0.94
SNX1-208ENST00000559844 MAGEB6Q8N7X4 407 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 AGBL3Q8NEM8 1001 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 HAND2P61296 217 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 USP48Q86UV5 1035 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 DZIP1Q86YF9 867 aaKnown RBP20.9■□□□□ 0.94
SNX1-208ENST00000559844 STRBPQ96SI9 672 aaKnown RBP20.9■□□□□ 0.94
SNX1-208ENST00000559844 TTF2Q9UNY4 1162 aaKnown RBP20.9■□□□□ 0.94
SNX1-208ENST00000559844 SUGT1Q9Y2Z0 365 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 KIF3AQ9Y496 699 aa20.9■□□□□ 0.94
SNX1-208ENST00000559844 GMPSP49915 693 aaPredicted RBP20.89■□□□□ 0.93
SNX1-208ENST00000559844 EVCP57679 992 aa20.89■□□□□ 0.93
SNX1-208ENST00000559844 APOBRQ0VD83 1088 aa20.89■□□□□ 0.93
SNX1-208ENST00000559844 SCRN1Q12765 414 aa20.89■□□□□ 0.93
SNX1-208ENST00000559844 ZSCAN23Q3MJ62 389 aa20.89■□□□□ 0.93
SNX1-208ENST00000559844 MB21D2Q8IYB1 491 aaPredicted RBP20.89■□□□□ 0.93
SNX1-208ENST00000559844 SMARCC2Q8TAQ2 1214 aa20.89■□□□□ 0.93
SNX1-208ENST00000559844 SYAP1Q96A49 352 aaPredicted RBP20.89■□□□□ 0.93
SNX1-208ENST00000559844 GMLQ99445 158 aa20.89■□□□□ 0.93
SNX1-208ENST00000559844 ADAMTSL1Q8N6G6 1762 aa20.89■□□□□ 0.93
SNX1-208ENST00000559844 APPP05067 770 aa20.88■□□□□ 0.93
SNX1-208ENST00000559844 XRCC6P12956 609 aaKnown RBP eCLIP20.88■□□□□ 0.93
SNX1-208ENST00000559844 GNAT2P19087 354 aa20.88■□□□□ 0.93
SNX1-208ENST00000559844 RPS12P25398 132 aaKnown RBP20.88■□□□□ 0.93
SNX1-208ENST00000559844 HMGN5P82970 282 aaKnown RBP20.88■□□□□ 0.93
SNX1-208ENST00000559844 TRDNQ13061 729 aa20.88■□□□□ 0.93
SNX1-208ENST00000559844 FOXD4L6Q3SYB3 417 aaPredicted RBP20.88■□□□□ 0.93
SNX1-208ENST00000559844 FOXD4L3Q6VB84 417 aaPredicted RBP20.88■□□□□ 0.93
SNX1-208ENST00000559844 CNPY2Q9Y2B0 182 aa20.88■□□□□ 0.93
SNX1-208ENST00000559844 PATL2C9JE40 543 aaKnown RBP20.88■□□□□ 0.93
SNX1-208ENST00000559844 MECOMQ03112 1051 aa20.88■□□□□ 0.93
SNX1-208ENST00000559844 SCNN1DP51172 638 aa20.87■□□□□ 0.93
SNX1-208ENST00000559844 FAM184AQ8NB25 1140 aa20.87■□□□□ 0.93
SNX1-208ENST00000559844 NSUN4Q96CB9 384 aaKnown RBP20.87■□□□□ 0.93
SNX1-208ENST00000559844 GLTPD2A6NH11 291 aa20.86■□□□□ 0.93
SNX1-208ENST00000559844 PRC1O43663 620 aa20.86■□□□□ 0.93
SNX1-208ENST00000559844 MBD4O95243 580 aa20.86■□□□□ 0.93
SNX1-208ENST00000559844 USP17L8P0C7I0 530 aa20.86■□□□□ 0.93
SNX1-208ENST00000559844 DIXDC1Q155Q3 683 aa20.86■□□□□ 0.93
SNX1-208ENST00000559844 ZNF384Q8TF68 577 aa20.86■□□□□ 0.93
SNX1-208ENST00000559844 PDIA3P30101 505 aaKnown RBP20.86■□□□□ 0.93
SNX1-208ENST00000559844 GAS2L3Q86XJ1 694 aa20.86■□□□□ 0.93
SNX1-208ENST00000559844 OGFOD1Q8N543 542 aa20.86■□□□□ 0.93
SNX1-208ENST00000559844 SHTN1A0MZ66 631 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 JAK2O60674 1132 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 UBE2HP62256 183 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 NAA16Q6N069 864 aaPredicted RBP20.85■□□□□ 0.93
SNX1-208ENST00000559844 CDC37L1Q7L3B6 337 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 DPF2Q92785 391 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 GDPD2Q9HCC8 539 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 CHST3Q7LGC8 479 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 MICALL2Q8IY33 904 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 NSUN7Q8NE18 718 aaKnown RBP20.85■□□□□ 0.93
SNX1-208ENST00000559844 NACAP1Q9BZK3 213 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 HDAC9Q9UKV0 1011 aa20.85■□□□□ 0.93
SNX1-208ENST00000559844 KRT85P78386 507 aa20.84■□□□□ 0.93
SNX1-208ENST00000559844 DNM1Q05193 864 aaKnown RBP20.84■□□□□ 0.93
SNX1-208ENST00000559844 IFNL3Q8IZI9 196 aa20.84■□□□□ 0.93
SNX1-208ENST00000559844 NAPBQ9H115 298 aa20.84■□□□□ 0.93
SNX1-208ENST00000559844 GPRC5DQ9NZD1 345 aa20.84■□□□□ 0.93
SNX1-208ENST00000559844 TMEM63CQ9P1W3 806 aa20.84■□□□□ 0.93
SNX1-208ENST00000559844 RBM27Q9P2N5 1060 aaKnown RBP20.84■□□□□ 0.93
SNX1-208ENST00000559844 CNOT7Q9UIV1 285 aaKnown RBP20.84■□□□□ 0.93
SNX1-208ENST00000559844 IGSF3O75054 1194 aa20.83■□□□□ 0.93
SNX1-208ENST00000559844 CYP7A1P22680 504 aa20.83■□□□□ 0.93
SNX1-208ENST00000559844 GSTO1P78417 241 aa20.83■□□□□ 0.93
SNX1-208ENST00000559844 TEKT1Q969V4 418 aa20.83■□□□□ 0.93
SNX1-208ENST00000559844 ARMT1Q9H993 441 aa20.83■□□□□ 0.93
SNX1-208ENST00000559844 NAP1L2Q9ULW6 460 aaPredicted RBP20.83■□□□□ 0.93
SNX1-208ENST00000559844 SCN4AP35499 1836 aa20.83■□□□□ 0.93
SNX1-208ENST00000559844 PTPDC1A2A3K4 754 aa20.83■□□□□ 0.92
SNX1-208ENST00000559844 H3BQV1 296 aa20.83■□□□□ 0.92
SNX1-208ENST00000559844 DHX16O60231 1041 aaKnown RBP20.83■□□□□ 0.92
SNX1-208ENST00000559844 DTNBO60941 627 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 214.2 ms