RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 KCNJ14Q9UNX9 436 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
LRRC28-216ENST00000559819 COL14A1Q05707 1796 aaKnown RBP11.63□□□□□ -0.55
LRRC28-216ENST00000559819 ECM29Q5VYK3 1845 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 ADAMTS2O95450 1211 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 SKILP12757 684 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 SYKP43405 635 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 SPECC1Q5M775 1068 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 AKNAD1Q5T1N1 836 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 ADGRA1Q86SQ6 560 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 XPO4Q9C0E2 1151 aaKnown RBP11.62□□□□□ -0.55
LRRC28-216ENST00000559819 IFNKQ9P0W0 207 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 NTSR2O95665 410 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
LRRC28-216ENST00000559819 CHRNDQ07001 517 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 SSRP1Q08945 709 aaKnown RBP11.62□□□□□ -0.55
LRRC28-216ENST00000559819 PNOCQ13519 176 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 NCAPHQ15003 741 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 MFSD6Q6ZSS7 791 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 TRMT1Q9NXH9 659 aaKnown RBP11.62□□□□□ -0.55
LRRC28-216ENST00000559819 ARAP2Q8WZ64 1704 aa11.62□□□□□ -0.55
LRRC28-216ENST00000559819 COL16A1Q07092 1604 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-216ENST00000559819 TRIM29Q14134 588 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 CCDC152Q4G0S7 254 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 SDR42E1Q8WUS8 393 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 LRP2BPQ9P2M1 347 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 HPSEQ9Y251 543 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 BTBD18B2RXH4 712 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 FMNL1O95466 1100 aaPredicted RBP11.61□□□□□ -0.55
LRRC28-216ENST00000559819 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.551e-8■■■■■ 33
LRRC28-216ENST00000559819 LIFRP42702 1097 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 SIK1P57059 783 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 TMC6Q7Z403 805 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 AK7Q96M32 723 aa11.61□□□□□ -0.55
LRRC28-216ENST00000559819 PPP6R2O75170 966 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 LMOD1P29536 600 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-216ENST00000559819 RBM6P78332 1123 aaKnown RBP11.6□□□□□ -0.55
LRRC28-216ENST00000559819 GRIN1Q05586 938 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 DDB1Q16531 1140 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 SMIM5Q71RC9 77 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 MARCH10Q8NA82 808 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-216ENST00000559819 BPIFA3Q9BQP9 254 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 ABCF2Q9UG63 623 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 FOXN1O15353 648 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 ATP1A3P13637 1013 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 CYP7A1P22680 504 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 GYG1P46976 350 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 NAA30Q147X3 362 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-216ENST00000559819 WTAPQ15007 396 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 PTPN21Q16825 1174 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 LONRF3Q496Y0 759 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 RESP18Q5W5W9 173 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 MTERF4Q7Z6M4 381 aaKnown RBP11.6□□□□□ -0.55
LRRC28-216ENST00000559819 NUP133Q8WUM0 1156 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 STAG1Q8WVM7 1258 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 KRT23Q9C075 422 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 PLCH1Q4KWH8 1693 aa11.6□□□□□ -0.55
LRRC28-216ENST00000559819 DOCK2Q92608 1830 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 SMTNL1A8MU46 457 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 RTN1Q16799 776 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 CNNM2Q9H8M5 875 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 CTIFO43310 598 aaKnown RBP11.59□□□□□ -0.55
LRRC28-216ENST00000559819 NEMFO60524 1076 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 IFNAR1P17181 557 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 TOB1P50616 345 aaPredicted RBP11.59□□□□□ -0.55
LRRC28-216ENST00000559819 KCNQ4P56696 695 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 NR5A1Q13285 461 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 PARP10Q53GL7 1025 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 CEP135Q66GS9 1140 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 METTL16Q86W50 562 aaKnown RBP11.59□□□□□ -0.55
LRRC28-216ENST00000559819 DIS3L2Q8IYB7 885 aaKnown RBP11.59□□□□□ -0.55
LRRC28-216ENST00000559819 NACAP1Q9BZK3 213 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 HSD3B7Q9H2F3 369 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 PNPLA7Q6ZV29 1317 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 STK36Q9NRP7 1315 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 CYP2D7A0A087X1C5 515 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 ATP2B1P20020 1258 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 PPARAQ07869 468 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 ARMCX5Q6P1M9 558 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 FOXP4Q8IVH2 680 aaPredicted RBP11.59□□□□□ -0.55
LRRC28-216ENST00000559819 NOSTRINQ8IVI9 506 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 JMYQ8N9B5 988 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 DPF2Q92785 391 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 RAI14Q9P0K7 980 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 TUBE1Q9UJT0 475 aa11.59□□□□□ -0.55
LRRC28-216ENST00000559819 KCNQ2O43526 872 aa11.58□□□□□ -0.56
LRRC28-216ENST00000559819 CUTAO60888 179 aa11.58□□□□□ -0.56
LRRC28-216ENST00000559819 MMP1P03956 469 aa11.58□□□□□ -0.56
LRRC28-216ENST00000559819 DYNLL1P63167 89 aaKnown RBP11.58□□□□□ -0.56
LRRC28-216ENST00000559819 FANCCQ00597 558 aa11.58□□□□□ -0.56
LRRC28-216ENST00000559819 ERFEQ4G0M1 354 aa11.58□□□□□ -0.56
LRRC28-216ENST00000559819 TIGD1Q96MW7 591 aa11.58□□□□□ -0.56
LRRC28-216ENST00000559819 OSBPL5Q9H0X9 879 aaPredicted RBP11.58□□□□□ -0.56
LRRC28-216ENST00000559819 SPATA31A1Q5TZJ5 1347 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms