RNA–Protein interactions for RNA: ENST00000559271.1

RPUSD2-202, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RPUSD2, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-202ENST00000559271 MB21D2Q8IYB1 491 aaPredicted RBP23.27■■□□□ 1.32
RPUSD2-202ENST00000559271 TGFBRAP1Q8WUH2 860 aa23.27■■□□□ 1.32
RPUSD2-202ENST00000559271 TMX3Q96JJ7 454 aa23.27■■□□□ 1.32
RPUSD2-202ENST00000559271 RNF41Q9H4P4 317 aaPredicted RBP23.27■■□□□ 1.32
RPUSD2-202ENST00000559271 CNNM2Q9H8M5 875 aa23.27■■□□□ 1.32
RPUSD2-202ENST00000559271 LIMCH1Q9UPQ0 1083 aa23.27■■□□□ 1.32
RPUSD2-202ENST00000559271 NEDD4P46934 1319 aa23.26■■□□□ 1.31
RPUSD2-202ENST00000559271 WDR19Q8NEZ3 1342 aa23.26■■□□□ 1.31
RPUSD2-202ENST00000559271 USP17L12C9JPN9 530 aa23.26■■□□□ 1.31
RPUSD2-202ENST00000559271 USP17L21D6R901 530 aa23.26■■□□□ 1.31
RPUSD2-202ENST00000559271 EXOSC10Q01780 885 aaKnown RBP23.26■■□□□ 1.31
RPUSD2-202ENST00000559271 MCM9Q9NXL9 1143 aa23.26■■□□□ 1.31
RPUSD2-202ENST00000559271 HSP90AA1P07900 732 aaKnown RBP23.25■■□□□ 1.31
RPUSD2-202ENST00000559271 MCM5P33992 734 aa23.25■■□□□ 1.31
RPUSD2-202ENST00000559271 CXCL9Q07325 125 aa23.25■■□□□ 1.31
RPUSD2-202ENST00000559271 TOB2Q14106 344 aaPredicted RBP23.25■■□□□ 1.31
RPUSD2-202ENST00000559271 CIAPIN1Q6FI81 312 aa23.25■■□□□ 1.31
RPUSD2-202ENST00000559271 APOBEC3HQ6NTF7 200 aaKnown RBP23.25■■□□□ 1.31
RPUSD2-202ENST00000559271 MFSD6Q6ZSS7 791 aa23.25■■□□□ 1.31
RPUSD2-202ENST00000559271 GMLQ99445 158 aa23.25■■□□□ 1.31
RPUSD2-202ENST00000559271 FLT1P17948 1338 aa23.24■■□□□ 1.31
RPUSD2-202ENST00000559271 MAPKAPK5Q8IW41 473 aa23.24■■□□□ 1.31
RPUSD2-202ENST00000559271 AMOTL1Q8IY63 956 aa23.24■■□□□ 1.31
RPUSD2-202ENST00000559271 AGBL3Q8NEM8 1001 aa23.24■■□□□ 1.31
RPUSD2-202ENST00000559271 KRT23Q9C075 422 aa23.24■■□□□ 1.31
RPUSD2-202ENST00000559271 CYP2D7A0A087X1C5 515 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 PCP11498 1178 aaKnown RBP23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 Q6ZUG5 572 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 SPRYD3Q8NCJ5 442 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 ZSCAN31Q96LW9 406 aaPredicted RBP23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 USP40Q9NVE5 1235 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 ECM29Q5VYK3 1845 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 PRC1O43663 620 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 SLC3A2P08195 630 aaKnown RBP23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 USP17L8P0C7I0 530 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 YY1P25490 414 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 PRELPP51888 382 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 RBM5P52756 815 aaKnown RBP eCLIP23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 FGD1P98174 961 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 TNIP1Q15025 636 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 CDC42EP5Q6NZY7 148 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 HDAC9Q9UKV0 1011 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 TACC3Q9Y6A5 838 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 ROBO3Q96MS0 1386 aa23.23■■□□□ 1.31
RPUSD2-202ENST00000559271 B4E1Z4 1266 aa23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 CYP2D6P10635 497 aa23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 ANTXR2P58335 489 aa23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 CUL4AQ13619 759 aa23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 ARHGAP27Q6ZUM4 889 aa23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 FBXL16Q8N461 479 aa23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 LRRC2Q9BYS8 371 aa23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 AGXT2Q9BYV1 514 aa23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 SH2B1Q9NRF2 756 aaPredicted RBP23.22■■□□□ 1.31
RPUSD2-202ENST00000559271 WDHD1O75717 1129 aaPredicted RBP23.21■■□□□ 1.31
RPUSD2-202ENST00000559271 CFAP100Q494V2 611 aa23.21■■□□□ 1.31
RPUSD2-202ENST00000559271 C12orf60Q5U649 245 aa23.21■■□□□ 1.31
RPUSD2-202ENST00000559271 ZBTB12Q9Y330 459 aaPredicted RBP23.21■■□□□ 1.31
RPUSD2-202ENST00000559271 FZD9O00144 591 aa23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 CHST3Q7LGC8 479 aa23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 OGFOD1Q8N543 542 aa23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 BRF1Q92994 677 aa23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 LARP6Q9BRS8 491 aaKnown RBP23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 SLKQ9H2G2 1235 aaPredicted RBP23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 INCENPQ9NQS7 918 aa23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 TOMM22Q9NS69 142 aa23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 TPCN1Q9ULQ1 816 aa23.2■■□□□ 1.3
RPUSD2-202ENST00000559271 SMIM22K7EJ46 135 aa23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 POLR3DP05423 398 aaPredicted RBP23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 FGRP09769 529 aa23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 CYB5R4Q7L1T6 521 aa23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 STK11IPQ8N1F8 1099 aa23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 SAP30BPQ9UHR5 308 aaKnown RBP23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 PCDHAC2Q9Y5I4 1007 aa23.19■■□□□ 1.3
RPUSD2-202ENST00000559271 KDM4AO75164 1064 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 LARGE1O95461 756 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 LMNB1P20700 586 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 RPS12P25398 132 aaKnown RBP23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 PICALMQ13492 652 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 RRP12Q5JTH9 1297 aaKnown RBP23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 ESR2Q92731 530 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 FOXD4L1Q9NU39 408 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 MYH1P12882 1939 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 ORC4O43929 436 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 EVX2Q03828 476 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 PDE4BQ07343 736 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 NKX2-3Q8TAU0 364 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 INTS4Q96HW7 963 aaKnown RBP23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 TMEM87BQ96K49 555 aa23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 DDX4Q9NQI0 724 aaKnown RBP23.18■■□□□ 1.3
RPUSD2-202ENST00000559271 MMP14P50281 582 aa23.17■■□□□ 1.3
RPUSD2-202ENST00000559271 ME3Q16798 604 aa23.17■■□□□ 1.3
RPUSD2-202ENST00000559271 SLC4A8Q2Y0W8 1093 aa23.17■■□□□ 1.3
RPUSD2-202ENST00000559271 DICER1Q9UPY3 1922 aaKnown RBP23.17■■□□□ 1.3
RPUSD2-202ENST00000559271 NT5C2P49902 561 aa23.16■■□□□ 1.3
RPUSD2-202ENST00000559271 MTA3Q9BTC8 594 aa23.16■■□□□ 1.3
RPUSD2-202ENST00000559271 IDI2Q9BXS1 227 aa23.16■■□□□ 1.3
RPUSD2-202ENST00000559271 OSBPL5Q9H0X9 879 aaPredicted RBP23.16■■□□□ 1.3
RPUSD2-202ENST00000559271 ZSWIM5Q9P217 1185 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms