RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 NFIAQ12857 509 aa18.83■□□□□ 0.61
CDC42BPB-204ENST00000559043 ZNF526Q8TF50 670 aaPredicted RBP18.83■□□□□ 0.61
CDC42BPB-204ENST00000559043 DDX4Q9NQI0 724 aaKnown RBP18.83■□□□□ 0.61
CDC42BPB-204ENST00000559043 HACL1Q9UJ83 578 aa18.83■□□□□ 0.61
CDC42BPB-204ENST00000559043 BAG4O95429 457 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 CUL4AQ13619 759 aa18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 TMX3Q96JJ7 454 aa18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 LSG1Q9H089 658 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 RRAGCQ9HB90 399 aa18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 ADARB2Q9NS39 739 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 ZNF70Q9UC06 446 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 MKRN1Q9UHC7 482 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 SLC4A4Q9Y6R1 1079 aa18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 WDR90Q96KV7 1748 aa18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 LMOD1P29536 600 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 ZFPM1Q8IX07 1006 aa18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 TGFBRAP1Q8WUH2 860 aa18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 TAF1DQ9H5J8 278 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 EPB41L4AQ9HCS5 686 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 BRPF3Q9ULD4 1205 aa18.82■□□□□ 0.6
CDC42BPB-204ENST00000559043 SMIM22K7EJ46 135 aa18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 EPHX2P34913 555 aa18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 TEX11Q8IYF3 940 aa18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 NOL10Q9BSC4 688 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 GZF1Q9H116 711 aaPredicted RBP18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 NMRK2Q9NPI5 230 aa18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 FAM198AQ9UFP1 575 aa18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 CDK5RAP2Q96SN8 1893 aa18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 PATL2C9JE40 543 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 EVX2Q03828 476 aa18.81■□□□□ 0.6
CDC42BPB-204ENST00000559043 GOLGA6L22H0YM25 854 aa18.8■□□□□ 0.6
CDC42BPB-204ENST00000559043 MAPKAPK5Q8IW41 473 aa18.8■□□□□ 0.6
CDC42BPB-204ENST00000559043 GOLGA6L3A6NEY3 463 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 FGAP02671 866 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 POTEIP0CG38 1075 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 POTEJP0CG39 1038 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 IFNL3Q8IZI9 196 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 MAP4K1Q92918 833 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 INTS4Q96HW7 963 aaKnown RBP18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 CRNKL1Q9BZJ0 848 aaKnown RBP18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 DCP1AQ9NPI6 582 aaPredicted RBP18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 SCN4AP35499 1836 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 PLCG2P16885 1265 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 PKP1Q13835 747 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 IDI2Q9BXS1 227 aa18.79■□□□□ 0.6
CDC42BPB-204ENST00000559043 ECM29Q5VYK3 1845 aa18.78■□□□□ 0.6
CDC42BPB-204ENST00000559043 TCP10L2B9ZVM9 353 aa18.78■□□□□ 0.6
CDC42BPB-204ENST00000559043 APPP05067 770 aa18.78■□□□□ 0.6
CDC42BPB-204ENST00000559043 TCP10Q12799 353 aa18.78■□□□□ 0.6
CDC42BPB-204ENST00000559043 PICALMQ13492 652 aa18.78■□□□□ 0.6
CDC42BPB-204ENST00000559043 ISY1Q9ULR0 285 aaKnown RBP18.78■□□□□ 0.6
CDC42BPB-204ENST00000559043 ZDHHC9Q9Y397 364 aa18.78■□□□□ 0.6
CDC42BPB-204ENST00000559043 POLR2AP24928 1970 aaKnown RBP18.78■□□□□ 0.6
CDC42BPB-204ENST00000559043 GNAT2P19087 354 aa18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 USP5P45974 858 aa18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 ANGEL2Q5VTE6 544 aaKnown RBP18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 KIAA1211Q6ZU35 1233 aa18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 DSCC1Q9BVC3 393 aa18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 VEZTQ9HBM0 779 aa18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 SNX14Q9Y5W7 946 aa18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 FLT1P17948 1338 aa18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 CNTNAP1P78357 1384 aa18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 BAZ2AQ9UIF9 1905 aaKnown RBP18.77■□□□□ 0.6
CDC42BPB-204ENST00000559043 CYP2D7A0A087X1C5 515 aa18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 IQCA1LA6NCM1 817 aa18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 VEGFAP15692 232 aaPredicted RBP18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 DLK2Q6UY11 383 aa18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 USP50Q70EL3 339 aaPredicted RBP18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 SH3BP5LQ7L8J4 393 aa18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 CDAN1Q8IWY9 1227 aa18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 ATP8A2Q9NTI2 1148 aa18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 SAP30BPQ9UHR5 308 aaKnown RBP18.77■□□□□ 0.59
CDC42BPB-204ENST00000559043 SLURP2P0DP57 97 aa18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 CYP2D6P10635 497 aa18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 ALX1Q15699 326 aa18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 SLC4A8Q2Y0W8 1093 aa18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 CERS3Q8IU89 383 aa18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 UPF3BQ9BZI7 483 aaKnown RBP18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 GGA3Q9NZ52 723 aa18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
CDC42BPB-204ENST00000559043 USP17L12C9JPN9 530 aa18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 USP17L21D6R901 530 aa18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 MYO1BO43795 1136 aa18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 EAPPQ56P03 285 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 PGAP2Q9UHJ9 254 aa18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 RBM8AQ9Y5S9 174 aaKnown RBP18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 FOCADQ5VW36 1801 aa18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 DDTLA6NHG4 134 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 NECTIN1Q15223 517 aa18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 KCNB2Q92953 911 aa18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 OSBPL5Q9H0X9 879 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-204ENST00000559043 PLCD1P51178 756 aa18.74■□□□□ 0.59
CDC42BPB-204ENST00000559043 KLHL40Q2TBA0 621 aa18.74■□□□□ 0.59
CDC42BPB-204ENST00000559043 FKBP1CQ5VVH2 108 aa18.74■□□□□ 0.59
CDC42BPB-204ENST00000559043 TTC14Q96N46 770 aa18.74■□□□□ 0.59
CDC42BPB-204ENST00000559043 TMEM39BQ9GZU3 492 aa18.74■□□□□ 0.59
CDC42BPB-204ENST00000559043 NBPF3Q9H094 633 aa18.74■□□□□ 0.59
CDC42BPB-204ENST00000559043 MCM9Q9NXL9 1143 aa18.74■□□□□ 0.59
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