RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 COA7Q96BR5 231 aa15.16■□□□□ 0.02
SMAD3-206ENST00000558739 HOOK2Q96ED9 719 aa15.16■□□□□ 0.02
SMAD3-206ENST00000558739 SEMA6BQ9H3T3 888 aa15.16■□□□□ 0.02
SMAD3-206ENST00000558739 HMX1Q9NP08 348 aaPredicted RBP15.16■□□□□ 0.02
SMAD3-206ENST00000558739 ZHX2Q9Y6X8 837 aa15.16■□□□□ 0.02
SMAD3-206ENST00000558739 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
SMAD3-206ENST00000558739 TNFRSF10AO00220 468 aa15.15■□□□□ 0.02
SMAD3-206ENST00000558739 CXCL11O14625 94 aa15.15■□□□□ 0.02
SMAD3-206ENST00000558739 HDLBPQ00341 1268 aaKnown RBP15.15■□□□□ 0.02
SMAD3-206ENST00000558739 TREML2Q5T2D2 321 aa15.15■□□□□ 0.02
SMAD3-206ENST00000558739 LDHAL6AQ6ZMR3 332 aa15.15■□□□□ 0.02
SMAD3-206ENST00000558739 ZFPM1Q8IX07 1006 aa15.15■□□□□ 0.02
SMAD3-206ENST00000558739 PUS3Q9BZE2 481 aaKnown RBP15.15■□□□□ 0.02
SMAD3-206ENST00000558739 CNNM1Q9NRU3 951 aa15.15■□□□□ 0.02
SMAD3-206ENST00000558739 TMEM265A0A087WTH1 108 aa15.14■□□□□ 0.01
SMAD3-206ENST00000558739 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
SMAD3-206ENST00000558739 C9orf50Q5SZB4 431 aa15.14■□□□□ 0.01
SMAD3-206ENST00000558739 LMBR1LQ6UX01 489 aa15.14■□□□□ 0.01
SMAD3-206ENST00000558739 GJD2Q9UKL4 321 aa15.14■□□□□ 0.01
SMAD3-206ENST00000558739 TRIM75PA6NK02 468 aa15.13■□□□□ 0.01
SMAD3-206ENST00000558739 PHF20L1A8MW92 1017 aa15.13■□□□□ 0.01
SMAD3-206ENST00000558739 FOSL2P15408 326 aa15.13■□□□□ 0.01
SMAD3-206ENST00000558739 PTPRAP18433 802 aa15.13■□□□□ 0.01
SMAD3-206ENST00000558739 FAM151AQ8WW52 585 aa15.13■□□□□ 0.01
SMAD3-206ENST00000558739 FAM122AQ96E09 287 aa15.13■□□□□ 0.01
SMAD3-206ENST00000558739 AFG3L2Q9Y4W6 797 aa15.13■□□□□ 0.01
SMAD3-206ENST00000558739 LOC285556D6RIA3 1793 aa15.13■□□□□ 0.01
SMAD3-206ENST00000558739 MYH13Q9UKX3 1938 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 PEX10O60683 326 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 GNAI1P63096 354 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 UBE4AQ14139 1066 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 FAM110CQ1W6H9 321 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 MAP3K21Q5TCX8 1036 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 FASTKD5Q7L8L6 764 aaKnown RBP15.12■□□□□ 0.01
SMAD3-206ENST00000558739 FBXO33Q7Z6M2 555 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 SYMPKQ92797 1274 aaKnown RBP15.12■□□□□ 0.01
SMAD3-206ENST00000558739 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
SMAD3-206ENST00000558739 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
SMAD3-206ENST00000558739 HOXD11P31277 338 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-206ENST00000558739 SHHQ15465 462 aa15.11■□□□□ 0.01
SMAD3-206ENST00000558739 DIXDC1Q155Q3 683 aa15.11■□□□□ 0.01
SMAD3-206ENST00000558739 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
SMAD3-206ENST00000558739 TJAP1Q5JTD0 557 aa15.11■□□□□ 0.01
SMAD3-206ENST00000558739 CDC42EP5Q6NZY7 148 aa15.11■□□□□ 0.01
SMAD3-206ENST00000558739 SCYL3Q8IZE3 742 aa15.11■□□□□ 0.01
SMAD3-206ENST00000558739 ADAMTS8Q9UP79 889 aa15.11■□□□□ 0.01
SMAD3-206ENST00000558739 SLC45A1Q9Y2W3 748 aa15.11■□□□□ 0.01
SMAD3-206ENST00000558739 CCND3P30281 292 aaPredicted RBP15.1■□□□□ 0.01
SMAD3-206ENST00000558739 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
SMAD3-206ENST00000558739 LINS1Q8NG48 757 aa15.1■□□□□ 0.01
SMAD3-206ENST00000558739 DNAAF4Q8WXU2 420 aa15.1■□□□□ 0.01
SMAD3-206ENST00000558739 DAGLAQ9Y4D2 1042 aa15.1■□□□□ 0.01
SMAD3-206ENST00000558739 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 CYP2B6P20813 491 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 FLIIQ13045 1269 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 LHX8Q68G74 356 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 HHIPL2Q6UWX4 724 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 VPS37DQ86XT2 251 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 TBC1D22AQ8WUA7 517 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 LBHD1Q9BQE6 289 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-206ENST00000558739 STK31Q9BXU1 1019 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 PICK1Q9NRD5 415 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 AGTPBP1Q9UPW5 1226 aa15.09■□□□□ 0.01
SMAD3-206ENST00000558739 FRAT2O75474 233 aaPredicted RBP15.08■□□□□ 0
SMAD3-206ENST00000558739 ATN1P54259 1190 aaPredicted RBP15.08■□□□□ 0
SMAD3-206ENST00000558739 MAP3K12Q12852 859 aa15.08■□□□□ 0
SMAD3-206ENST00000558739 FKBP5Q13451 457 aaPredicted RBP15.08■□□□□ 0
SMAD3-206ENST00000558739 SH3BP5LQ7L8J4 393 aa15.08■□□□□ 0
SMAD3-206ENST00000558739 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
SMAD3-206ENST00000558739 F6X3S4 739 aa15.07■□□□□ 0
SMAD3-206ENST00000558739 APAF1O14727 1248 aa15.07■□□□□ 0
SMAD3-206ENST00000558739 CACNB2Q08289 660 aaPredicted RBP15.07■□□□□ 0
SMAD3-206ENST00000558739 CCL14Q16627 93 aa15.07■□□□□ 0
SMAD3-206ENST00000558739 TRANK1O15050 2925 aa15.07■□□□□ 0
SMAD3-206ENST00000558739 WDR43Q15061 677 aaKnown RBP eCLIP15.06■□□□□ 0
SMAD3-206ENST00000558739 MRIQ9BWK5 157 aa15.06■□□□□ 0
SMAD3-206ENST00000558739 MAST3O60307 1309 aa15.06■□□□□ 0
SMAD3-206ENST00000558739 ATAD5Q96QE3 1844 aa15.06■□□□□ 0
SMAD3-206ENST00000558739 WDFY4Q6ZS81 3184 aa15.05■□□□□ -0
SMAD3-206ENST00000558739 GRIN2CQ14957 1233 aa15.05■□□□□ -0
SMAD3-206ENST00000558739 LRRC24Q50LG9 513 aa15.05■□□□□ -0
SMAD3-206ENST00000558739 SENP6Q9GZR1 1112 aaPredicted RBP15.05■□□□□ -0
SMAD3-206ENST00000558739 RFX7Q2KHR2 1363 aa15.05■□□□□ -0
SMAD3-206ENST00000558739 RLFQ13129 1914 aa15.05■□□□□ -0
SMAD3-206ENST00000558739 CACNA1AO00555 2505 aa15.05■□□□□ -0
SMAD3-206ENST00000558739 FAM196BA6NMK8 535 aa15.04■□□□□ -0
SMAD3-206ENST00000558739 PRDX5P30044 214 aa15.04■□□□□ -0
SMAD3-206ENST00000558739 VGLL2Q8N8G2 317 aa15.04■□□□□ -0
SMAD3-206ENST00000558739 ASCC2Q9H1I8 757 aaPredicted RBP15.04■□□□□ -0
SMAD3-206ENST00000558739 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
SMAD3-206ENST00000558739 RGS3P49796 1198 aa15.03■□□□□ -0
SMAD3-206ENST00000558739 HMGCS2P54868 508 aa15.03■□□□□ -0
SMAD3-206ENST00000558739 SMAD3P84022 425 aaKnown RBP15.03■□□□□ -0
SMAD3-206ENST00000558739 TWISTNBQ3B726 338 aaPredicted RBP15.03■□□□□ -0
SMAD3-206ENST00000558739 BEND3Q5T5X7 828 aa15.03■□□□□ -0
SMAD3-206ENST00000558739 ADAMTS19Q8TE59 1207 aa15.03■□□□□ -0
SMAD3-206ENST00000558739 KAZALD1Q96I82 304 aa15.03■□□□□ -0
SMAD3-206ENST00000558739 TXNRD2Q9NNW7 524 aa15.03■□□□□ -0
SMAD3-206ENST00000558739 USP40Q9NVE5 1235 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms