RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 LRP2BPQ9P2M1 347 aa19.01■□□□□ 0.63
CSHL1-208ENST00000558609 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
CSHL1-208ENST00000558609 IGSF3O75054 1194 aa19■□□□□ 0.63
CSHL1-208ENST00000558609 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
CSHL1-208ENST00000558609 OTUD5Q96G74 571 aa19■□□□□ 0.63
CSHL1-208ENST00000558609 CCDC8Q9H0W5 538 aaPredicted RBP19■□□□□ 0.63
CSHL1-208ENST00000558609 TLR7Q9NYK1 1049 aaKnown RBP19■□□□□ 0.63
CSHL1-208ENST00000558609 PDE4DIPQ5VU43 2346 aa19■□□□□ 0.63
CSHL1-208ENST00000558609 AK9Q5TCS8 1911 aa19■□□□□ 0.63
CSHL1-208ENST00000558609 INPP5BP32019 993 aa18.99■□□□□ 0.63
CSHL1-208ENST00000558609 SIRT2Q8IXJ6 389 aa18.99■□□□□ 0.63
CSHL1-208ENST00000558609 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.99■□□□□ 0.63
CSHL1-208ENST00000558609 BRI3BPQ8WY22 251 aa18.99■□□□□ 0.63
CSHL1-208ENST00000558609 DDX4Q9NQI0 724 aaKnown RBP18.99■□□□□ 0.63
CSHL1-208ENST00000558609 ATRNL1Q5VV63 1379 aa18.98■□□□□ 0.63
CSHL1-208ENST00000558609 FKTNO75072 461 aa18.98■□□□□ 0.63
CSHL1-208ENST00000558609 HMMRO75330 724 aa18.98■□□□□ 0.63
CSHL1-208ENST00000558609 CYP2E1P05181 493 aaPredicted RBP18.98■□□□□ 0.63
CSHL1-208ENST00000558609 MAP3K10Q02779 954 aa18.98■□□□□ 0.63
CSHL1-208ENST00000558609 PPIL2Q13356 520 aa18.98■□□□□ 0.63
CSHL1-208ENST00000558609 SH3BP5LQ7L8J4 393 aa18.98■□□□□ 0.63
CSHL1-208ENST00000558609 CCL15-CCL14A0A0B4J2E2 113 aa18.97■□□□□ 0.63
CSHL1-208ENST00000558609 ZAP70P43403 619 aa18.97■□□□□ 0.63
CSHL1-208ENST00000558609 PPATQ06203 517 aa18.97■□□□□ 0.63
CSHL1-208ENST00000558609 PKN2Q16513 984 aaKnown RBP18.97■□□□□ 0.63
CSHL1-208ENST00000558609 CCL15Q16663 113 aa18.97■□□□□ 0.63
CSHL1-208ENST00000558609 NOL9Q5SY16 702 aaKnown RBP18.97■□□□□ 0.63
CSHL1-208ENST00000558609 RHPN1Q8TCX5 695 aa18.97■□□□□ 0.63
CSHL1-208ENST00000558609 HPS5Q9UPZ3 1129 aa18.97■□□□□ 0.63
CSHL1-208ENST00000558609 DDTLA6NHG4 134 aaPredicted RBP18.96■□□□□ 0.63
CSHL1-208ENST00000558609 PHF20L1A8MW92 1017 aa18.96■□□□□ 0.63
CSHL1-208ENST00000558609 IRF6O14896 467 aa18.96■□□□□ 0.63
CSHL1-208ENST00000558609 CETPP11597 493 aa18.96■□□□□ 0.63
CSHL1-208ENST00000558609 CRHR2Q13324 411 aa18.96■□□□□ 0.63
CSHL1-208ENST00000558609 PICALMQ13492 652 aa18.96■□□□□ 0.63
CSHL1-208ENST00000558609 C20orf194Q5TEA3 1177 aa18.96■□□□□ 0.63
CSHL1-208ENST00000558609 NAA16Q6N069 864 aaPredicted RBP18.96■□□□□ 0.63
CSHL1-208ENST00000558609 AACSQ86V21 672 aa18.96■□□□□ 0.63
CSHL1-208ENST00000558609 ZSCAN29Q8IWY8 852 aaPredicted RBP18.96■□□□□ 0.63
CSHL1-208ENST00000558609 SNAPC2Q13487 334 aa18.95■□□□□ 0.62
CSHL1-208ENST00000558609 PRPF38BQ5VTL8 546 aaKnown RBP18.95■□□□□ 0.62
CSHL1-208ENST00000558609 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
CSHL1-208ENST00000558609 PIH1D3Q9NQM4 214 aaKnown RBP18.95■□□□□ 0.62
CSHL1-208ENST00000558609 BAG3O95817 575 aa18.94■□□□□ 0.62
CSHL1-208ENST00000558609 PPP4CP60510 307 aa18.94■□□□□ 0.62
CSHL1-208ENST00000558609 FAM43AQ8N2R8 423 aa18.94■□□□□ 0.62
CSHL1-208ENST00000558609 NOL10Q9BSC4 688 aaKnown RBP18.94■□□□□ 0.62
CSHL1-208ENST00000558609 IL1RAPL2Q9NP60 686 aa18.94■□□□□ 0.62
CSHL1-208ENST00000558609 ZCCHC17Q9NP64 241 aaKnown RBP18.94■□□□□ 0.62
CSHL1-208ENST00000558609 DOCK2Q92608 1830 aa18.94■□□□□ 0.62
CSHL1-208ENST00000558609 COL2A1P02458 1487 aaPredicted RBP18.93■□□□□ 0.62
CSHL1-208ENST00000558609 TBC1D12O60347 775 aa18.93■□□□□ 0.62
CSHL1-208ENST00000558609 RAB11FIP3O75154 756 aa18.93■□□□□ 0.62
CSHL1-208ENST00000558609 TEX11Q8IYF3 940 aa18.93■□□□□ 0.62
CSHL1-208ENST00000558609 CLASRPQ8N2M8 674 aaKnown RBP18.93■□□□□ 0.62
CSHL1-208ENST00000558609 SH3RF3Q8TEJ3 882 aaPredicted RBP18.93■□□□□ 0.62
CSHL1-208ENST00000558609 KCNH4Q9UQ05 1017 aa18.93■□□□□ 0.62
CSHL1-208ENST00000558609 MAST2Q6P0Q8 1798 aa18.92■□□□□ 0.62
CSHL1-208ENST00000558609 PLCG2P16885 1265 aa18.92■□□□□ 0.62
CSHL1-208ENST00000558609 TAF1CQ15572 869 aaPredicted RBP18.92■□□□□ 0.62
CSHL1-208ENST00000558609 ADGRA1Q86SQ6 560 aa18.92■□□□□ 0.62
CSHL1-208ENST00000558609 SCYL3Q8IZE3 742 aa18.92■□□□□ 0.62
CSHL1-208ENST00000558609 OSBPL5Q9H0X9 879 aaPredicted RBP18.92■□□□□ 0.62
CSHL1-208ENST00000558609 ZFYVE28Q9HCC9 887 aa18.92■□□□□ 0.62
CSHL1-208ENST00000558609 AATFQ9NY61 560 aaKnown RBP eCLIP18.92■□□□□ 0.62
CSHL1-208ENST00000558609 MYO5AQ9Y4I1 1855 aaKnown RBP18.91■□□□□ 0.62
CSHL1-208ENST00000558609 BTBD19C9JJ37 291 aa18.91■□□□□ 0.62
CSHL1-208ENST00000558609 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
CSHL1-208ENST00000558609 TMED8Q6PL24 325 aaPredicted RBP18.91■□□□□ 0.62
CSHL1-208ENST00000558609 ERO1AQ96HE7 468 aa18.91■□□□□ 0.62
CSHL1-208ENST00000558609 APBB1O00213 710 aa18.9■□□□□ 0.62
CSHL1-208ENST00000558609 CXCL11O14625 94 aa18.9■□□□□ 0.62
CSHL1-208ENST00000558609 SLURP2P0DP57 97 aa18.9■□□□□ 0.62
CSHL1-208ENST00000558609 SP3Q02447 781 aa18.9■□□□□ 0.62
CSHL1-208ENST00000558609 FBXO46Q6PJ61 603 aaPredicted RBP18.9■□□□□ 0.62
CSHL1-208ENST00000558609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.9■□□□□ 0.62
CSHL1-208ENST00000558609 PICK1Q9NRD5 415 aa18.9■□□□□ 0.62
CSHL1-208ENST00000558609 IDH1O75874 414 aaKnown RBP18.89■□□□□ 0.61
CSHL1-208ENST00000558609 PTPRAP18433 802 aa18.89■□□□□ 0.61
CSHL1-208ENST00000558609 CYP7A1P22680 504 aa18.89■□□□□ 0.61
CSHL1-208ENST00000558609 DHX36Q9H2U1 1008 aaKnown RBP18.89■□□□□ 0.61
CSHL1-208ENST00000558609 ANTXR1Q9H6X2 564 aa18.89■□□□□ 0.61
CSHL1-208ENST00000558609 NDUFB9Q9Y6M9 179 aa18.89■□□□□ 0.61
CSHL1-208ENST00000558609 IFIT2P09913 472 aaKnown RBP18.88■□□□□ 0.61
CSHL1-208ENST00000558609 MAP3K12Q12852 859 aa18.88■□□□□ 0.61
CSHL1-208ENST00000558609 MOGSQ13724 837 aa18.88■□□□□ 0.61
CSHL1-208ENST00000558609 ANKRD23Q86SG2 305 aa18.88■□□□□ 0.61
CSHL1-208ENST00000558609 TGFBRAP1Q8WUH2 860 aa18.88■□□□□ 0.61
CSHL1-208ENST00000558609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.88■□□□□ 0.61
CSHL1-208ENST00000558609 ZHX2Q9Y6X8 837 aa18.88■□□□□ 0.61
CSHL1-208ENST00000558609 TLR2O60603 784 aa18.87■□□□□ 0.61
CSHL1-208ENST00000558609 TTF1Q15361 905 aaPredicted RBP18.87■□□□□ 0.61
CSHL1-208ENST00000558609 OTOP1Q7RTM1 612 aa18.87■□□□□ 0.61
CSHL1-208ENST00000558609 CERS3Q8IU89 383 aa18.87■□□□□ 0.61
CSHL1-208ENST00000558609 MAGEB6Q8N7X4 407 aa18.87■□□□□ 0.61
CSHL1-208ENST00000558609 CD99L2Q8TCZ2 262 aa18.87■□□□□ 0.61
CSHL1-208ENST00000558609 PI4KBQ9UBF8 816 aa18.87■□□□□ 0.61
CSHL1-208ENST00000558609 HERC5Q9UII4 1024 aaKnown RBP18.87■□□□□ 0.61
CSHL1-208ENST00000558609 AFG3L2Q9Y4W6 797 aa18.87■□□□□ 0.61
CSHL1-208ENST00000558609 TRIM17Q9Y577 477 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms