RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 MAGEA10P43363 369 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-207ENST00000558500 UBE4AQ14139 1066 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 APOBEC3HQ6NTF7 200 aaKnown RBP8.59□□□□□ -1.03
LRRC28-207ENST00000558500 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 DNAAF4Q8WXU2 420 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 ZNF594Q96JF6 807 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-207ENST00000558500 ZDHHC15Q96MV8 337 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 MRIQ9BWK5 157 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 CNNM1Q9NRU3 951 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 ZNF112Q9UJU3 913 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 SPEF2Q9C093 1822 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 RPTORQ8N122 1335 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 MYBBP1AQ9BQG0 1328 aaKnown RBP8.58□□□□□ -1.04
LRRC28-207ENST00000558500 APAF1O14727 1248 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
LRRC28-207ENST00000558500 SYN1P17600 705 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 FLIIQ13045 1269 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 CCDC57Q2TAC2 916 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 TAF7LQ5H9L4 462 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 NOL9Q5SY16 702 aaKnown RBP8.58□□□□□ -1.04
LRRC28-207ENST00000558500 LMBR1LQ6UX01 489 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 TBC1D22AQ8WUA7 517 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 DCBLD2Q96PD2 775 aa8.58□□□□□ -1.04
LRRC28-207ENST00000558500 UBE2OQ9C0C9 1292 aaKnown RBP8.58□□□□□ -1.04
LRRC28-207ENST00000558500 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.58□□□□□ -1.04
LRRC28-207ENST00000558500 SPTBN5Q9NRC6 3674 aaKnown RBP8.57□□□□□ -1.04
LRRC28-207ENST00000558500 UNC80Q8N2C7 3258 aa8.57□□□□□ -1.04
LRRC28-207ENST00000558500 CHAF1AQ13111 956 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-207ENST00000558500 EPHA10Q5JZY3 1008 aa8.57□□□□□ -1.04
LRRC28-207ENST00000558500 FBXO33Q7Z6M2 555 aa8.57□□□□□ -1.04
LRRC28-207ENST00000558500 FAM151AQ8WW52 585 aa8.57□□□□□ -1.04
LRRC28-207ENST00000558500 GUCD1Q96NT3 240 aa8.57□□□□□ -1.04
LRRC28-207ENST00000558500 NBPF3Q9H094 633 aa8.57□□□□□ -1.04
LRRC28-207ENST00000558500 PRDM6Q9NQX0 595 aa8.57□□□□□ -1.04
LRRC28-207ENST00000558500 IQSEC3Q9UPP2 1182 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-207ENST00000558500 ARAP2Q8WZ64 1704 aa8.57□□□□□ -1.04
LRRC28-207ENST00000558500 A0A0G2JLL6 359 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-207ENST00000558500 POTEB2H3BUK9 544 aa8.56□□□□□ -1.04
LRRC28-207ENST00000558500 GTPBP6O43824 516 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-207ENST00000558500 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-207ENST00000558500 FAM109BQ6ICB4 259 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-207ENST00000558500 HHIPL2Q6UWX4 724 aa8.56□□□□□ -1.04
LRRC28-207ENST00000558500 FASTKD5Q7L8L6 764 aaKnown RBP8.56□□□□□ -1.04
LRRC28-207ENST00000558500 PRRT2Q7Z6L0 340 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-207ENST00000558500 VPS37DQ86XT2 251 aa8.56□□□□□ -1.04
LRRC28-207ENST00000558500 TSR2Q969E8 191 aaKnown RBP8.56□□□□□ -1.04
LRRC28-207ENST00000558500 COA7Q96BR5 231 aa8.56□□□□□ -1.04
LRRC28-207ENST00000558500 PUS3Q9BZE2 481 aaKnown RBP8.56□□□□□ -1.04
LRRC28-207ENST00000558500 C11orf49Q9H6J7 331 aa8.56□□□□□ -1.04
LRRC28-207ENST00000558500 SLC45A1Q9Y2W3 748 aa8.56□□□□□ -1.04
LRRC28-207ENST00000558500 MAST3O60307 1309 aa8.55□□□□□ -1.04
LRRC28-207ENST00000558500 MYH3P11055 1940 aa8.55□□□□□ -1.04
LRRC28-207ENST00000558500 FRAT2O75474 233 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-207ENST00000558500 HMGCRP04035 888 aa8.55□□□□□ -1.04
LRRC28-207ENST00000558500 TWISTNBQ3B726 338 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-207ENST00000558500 ZNF467Q7Z7K2 595 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-207ENST00000558500 SMCR8Q8TEV9 937 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-207ENST00000558500 SUGT1Q9Y2Z0 365 aa8.55□□□□□ -1.04
LRRC28-207ENST00000558500 ZHX2Q9Y6X8 837 aa8.55□□□□□ -1.04
LRRC28-207ENST00000558500 PTPRAP18433 802 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 NFIAQ12857 509 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 NBR1Q14596 966 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 CAVIN4Q5BKX8 364 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 BEND3Q5T5X7 828 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 GADL1Q6ZQY3 521 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 HMX1Q9NP08 348 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-207ENST00000558500 OGDHLQ9ULD0 1010 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 AFG3L2Q9Y4W6 797 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 VCANP13611 3396 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 PFASO15067 1338 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 MROH5Q6ZUA9 1318 aa8.54□□□□□ -1.04
LRRC28-207ENST00000558500 PHF20L1A8MW92 1017 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 GRM8O00222 908 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 TCP10Q12799 353 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 TRIM32Q13049 653 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 FAM110CQ1W6H9 321 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 CDC42EP5Q6NZY7 148 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 SCYL3Q8IZE3 742 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 ANKRD13CQ8N6S4 541 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 FAM161BQ96MY7 647 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 PICK1Q9NRD5 415 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 FAM198AQ9UFP1 575 aa8.53□□□□□ -1.04
LRRC28-207ENST00000558500 ATRNL1Q5VV63 1379 aa8.52□□□□□ -1.05
LRRC28-207ENST00000558500 F6X3S4 739 aa8.52□□□□□ -1.05
LRRC28-207ENST00000558500 COL6A1P12109 1028 aa8.52□□□□□ -1.05
LRRC28-207ENST00000558500 TIE1P35590 1138 aa8.52□□□□□ -1.05
LRRC28-207ENST00000558500 MDM2Q00987 491 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-207ENST00000558500 ZFPM1Q8IX07 1006 aa8.52□□□□□ -1.05
LRRC28-207ENST00000558500 GJD2Q9UKL4 321 aa8.52□□□□□ -1.05
LRRC28-207ENST00000558500 AGTPBP1Q9UPW5 1226 aa8.52□□□□□ -1.05
LRRC28-207ENST00000558500 DAGLAQ9Y4D2 1042 aa8.52□□□□□ -1.05
LRRC28-207ENST00000558500 COL2A1P02458 1487 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-207ENST00000558500 TRIM75PA6NK02 468 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 DIXDC1Q155Q3 683 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 METTL24Q5JXM2 366 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 MAP3K21Q5TCX8 1036 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 ZNF697Q5TEC3 545 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 VGLL2Q8N8G2 317 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 MAFAQ8NHW3 353 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms