RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 IDH1O75874 414 aaKnown RBP10.31□□□□□ -0.76
TPM1-213ENST00000558400 ZBTB48P10074 688 aaPredicted RBP10.31□□□□□ -0.76
TPM1-213ENST00000558400 TCP10Q12799 353 aa10.31□□□□□ -0.76
TPM1-213ENST00000558400 RASAL3Q86YV0 1011 aa10.31□□□□□ -0.76
TPM1-213ENST00000558400 CSRNP1Q96S65 589 aa10.31□□□□□ -0.76
TPM1-213ENST00000558400 FAM198AQ9UFP1 575 aa10.31□□□□□ -0.76
TPM1-213ENST00000558400 SUPT16HQ9Y5B9 1047 aaKnown RBP10.31□□□□□ -0.76
TPM1-213ENST00000558400 CSADQ9Y600 493 aa10.31□□□□□ -0.76
TPM1-213ENST00000558400 RPAP1Q9BWH6 1393 aaPredicted RBP10.3□□□□□ -0.76
TPM1-213ENST00000558400 PAPPA2Q9BXP8 1791 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 WDHD1O75717 1129 aaPredicted RBP10.3□□□□□ -0.76
TPM1-213ENST00000558400 TM4SF4P48230 202 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 RGS3P49796 1198 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 RHBDL3P58872 404 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 SREBF2Q12772 1141 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 NFIAQ12857 509 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 HDAC1Q13547 482 aaPredicted RBP10.3□□□□□ -0.76
TPM1-213ENST00000558400 SPRYD7Q5W111 196 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 ZSCAN29Q8IWY8 852 aaPredicted RBP10.3□□□□□ -0.76
TPM1-213ENST00000558400 ZNF384Q8TF68 577 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 ZNF341Q9BYN7 854 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 BCL11AQ9H165 835 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 DHX36Q9H2U1 1008 aaKnown RBP10.3□□□□□ -0.76
TPM1-213ENST00000558400 RWDD1Q9H446 243 aaPredicted RBP10.3□□□□□ -0.76
TPM1-213ENST00000558400 SAGE1Q9NXZ1 904 aa10.3□□□□□ -0.76
TPM1-213ENST00000558400 MANSC4A6NHS7 340 aaPredicted RBP10.29□□□□□ -0.76
TPM1-213ENST00000558400 ALDH1A1P00352 501 aa10.29□□□□□ -0.76
TPM1-213ENST00000558400 CYP7A1P22680 504 aa10.29□□□□□ -0.76
TPM1-213ENST00000558400 MAP3K10Q02779 954 aa10.29□□□□□ -0.76
TPM1-213ENST00000558400 OTUD7BQ6GQQ9 843 aa10.29□□□□□ -0.76
TPM1-213ENST00000558400 TEX11Q8IYF3 940 aa10.29□□□□□ -0.76
TPM1-213ENST00000558400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.29□□□□□ -0.76
TPM1-213ENST00000558400 HAUS7Q99871 368 aa10.29□□□□□ -0.76
TPM1-213ENST00000558400 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.29□□□□□ -0.76
TPM1-213ENST00000558400 BOLA2Q9H3K6 86 aa10.29□□□□□ -0.76
TPM1-213ENST00000558400 PIH1D3Q9NQM4 214 aaKnown RBP10.29□□□□□ -0.76
TPM1-213ENST00000558400 ECHDC1Q9NTX5 307 aa10.29□□□□□ -0.76
TPM1-213ENST00000558400 ARAP2Q8WZ64 1704 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 ERC2O15083 957 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 SMARCA5O60264 1052 aaPredicted RBP10.28□□□□□ -0.76
TPM1-213ENST00000558400 TBC1D12O60347 775 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 LRRFIP1Q32MZ4 808 aaKnown RBP10.28□□□□□ -0.76
TPM1-213ENST00000558400 SLC9C2Q5TAH2 1124 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 ZSCAN25Q6NSZ9 544 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.28□□□□□ -0.76
TPM1-213ENST00000558400 MIGA2Q7L4E1 593 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 ERO1BQ86YB8 467 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 FOXP4Q8IVH2 680 aaPredicted RBP10.28□□□□□ -0.76
TPM1-213ENST00000558400 MAGEB6Q8N7X4 407 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 WNK4Q96J92 1243 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 WRNIP1Q96S55 665 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 ZIC5Q96T25 663 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 DNAJC2Q99543 621 aaKnown RBP10.28□□□□□ -0.76
TPM1-213ENST00000558400 ANTXR1Q9H6X2 564 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 PAG1Q9NWQ8 432 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 AATFQ9NY61 560 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM1-213ENST00000558400 PI4KBQ9UBF8 816 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 ZNF112Q9UJU3 913 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 FZD1Q9UP38 647 aa10.28□□□□□ -0.76
TPM1-213ENST00000558400 GOLIM4O00461 696 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 PICALMQ13492 652 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 ANKRD45Q5TZF3 282 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 CDAN1Q8IWY9 1227 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 ZFPM1Q8IX07 1006 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 CLMNQ96JQ2 1002 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 RNF186Q9NXI6 227 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 TTC41PQ6P2S7 1318 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 MYH13Q9UKX3 1938 aa10.27□□□□□ -0.77
TPM1-213ENST00000558400 ECM29Q5VYK3 1845 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 DDTLA6NHG4 134 aaPredicted RBP10.26□□□□□ -0.77
TPM1-213ENST00000558400 CTNND1O60716 968 aaKnown RBP10.26□□□□□ -0.77
TPM1-213ENST00000558400 TRPA1O75762 1119 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 GLRX3O76003 335 aaKnown RBP10.26□□□□□ -0.77
TPM1-213ENST00000558400 GTF2A2P52657 109 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 PPATQ06203 517 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 VGLL4Q14135 290 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
TPM1-213ENST00000558400 TGFBRAP1Q8WUH2 860 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 OPTNQ96CV9 577 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 OSBPL5Q9H0X9 879 aaPredicted RBP10.26□□□□□ -0.77
TPM1-213ENST00000558400 ELP3Q9H9T3 547 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 DDX4Q9NQI0 724 aaKnown RBP10.26□□□□□ -0.77
TPM1-213ENST00000558400 HERC5Q9UII4 1024 aaKnown RBP10.26□□□□□ -0.77
TPM1-213ENST00000558400 ATRNL1Q5VV63 1379 aa10.26□□□□□ -0.77
TPM1-213ENST00000558400 MAGEB6P1A0A0J9YX57 407 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 TESPA1A2RU30 521 aaPredicted RBP10.25□□□□□ -0.77
TPM1-213ENST00000558400 SPDYE5A6NIY4 337 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 PDE6AP16499 860 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 USP5P45974 858 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.77
TPM1-213ENST00000558400 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
TPM1-213ENST00000558400 UBE3CQ15386 1083 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 NOM1Q5C9Z4 860 aaKnown RBP10.25□□□□□ -0.77
TPM1-213ENST00000558400 HABP4Q5JVS0 413 aaKnown RBP10.25□□□□□ -0.77
TPM1-213ENST00000558400 NOL9Q5SY16 702 aaKnown RBP10.25□□□□□ -0.77
TPM1-213ENST00000558400 SH3BP5LQ7L8J4 393 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 TTC6Q86TZ1 520 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 EXOC6Q8TAG9 804 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 ZKSCAN4Q969J2 545 aaPredicted RBP10.25□□□□□ -0.77
TPM1-213ENST00000558400 CFHR5Q9BXR6 569 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms