RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 HAUS4Q9H6D7 363 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 COMMD10Q9Y6G5 202 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 GNAQP50148 359 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 PLCB3Q01970 1234 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 RNASELQ05823 741 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 MTX1Q13505 466 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 CCDC14Q49A88 953 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 ZNF444Q8N0Y2 327 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 SYNRGQ9UMZ2 1314 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 HMGB1P1B2RPK0 211 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 CUTAO60888 179 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 MAGEA1P43355 309 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 E2F5Q15329 346 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 RILPL1Q5EBL4 403 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 SMC1BQ8NDV3 1235 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 FBXO41Q8TF61 875 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 MBIPQ9NS73 344 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 IRX5P78411 483 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 ARID5AQ03989 594 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 LRMPQ12912 555 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 MRPL50Q8N5N7 158 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 NOC4LQ9BVI4 516 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 NOP53Q9NZM5 478 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 NFE2L3Q9Y4A8 694 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 STX10O60499 249 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 SYNCQ9H7C4 482 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 KCNH3Q9ULD8 1083 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 HYOU1Q9Y4L1 999 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 SHANK2Q9UPX8 1470 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 WDR62O43379 1518 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 ERCC5P28715 1186 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 CCT6AP40227 531 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 CCDC92Q53HC0 331 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-201ENST00000558282 RNF8O76064 485 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 PNMA6AP0CW24 399 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 HSPA1LP34931 641 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 ATP1A2P50993 1020 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 SEPT2Q15019 361 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 TAF11Q15544 211 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 TDRD7Q8NHU6 1098 aaKnown RBP13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 AOX1Q06278 1338 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 EIF3CLB5ME19 914 aaKnown RBP13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 CLCN6P51797 869 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 RPS6KA1Q15418 735 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 EIF3CQ99613 913 aaKnown RBP13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 ABCF2Q9UG63 623 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 DTNBP1Q96EV8 351 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 MEIS3Q99687 375 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 POLE2P56282 527 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 PRR16Q569H4 304 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 HAUS1Q96CS2 278 aa13.1□□□□□ -0.31
CSPG4P12-201ENST00000558282 CALM1P0DP23 149 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 CALM2P0DP24 149 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 CALM3P0DP25 149 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 HAND2P61296 217 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 P3H4Q92791 437 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 ZNF202O95125 648 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 CCDC152Q4G0S7 254 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 VPS16Q9H269 839 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 SLC5A1P13866 664 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 PDE4BQ07343 736 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 NBPF10Q6P3W6 841 aaKnown RBP13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 CCDC84Q86UT8 332 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 SLF1Q9BQI6 1058 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 KAT14Q9H8E8 782 aa13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 MORC2Q9Y6X9 1032 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P12-201ENST00000558282 KLHDC4Q8TBB5 520 aa13.08□□□□□ -0.31
CSPG4P12-201ENST00000558282 MAIP1Q8WWC4 291 aa13.08□□□□□ -0.31
CSPG4P12-201ENST00000558282 LRRC2Q9BYS8 371 aa13.08□□□□□ -0.31
CSPG4P12-201ENST00000558282 RPL13P26373 211 aaKnown RBP13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 PAK1Q13153 545 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 CEP85Q6P2H3 762 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 PSMD1Q99460 953 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 CENPKQ9BS16 269 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 YY1AP1Q9H869 796 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 MCM7P33993 719 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 KRT2P35908 639 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 NMIQ13287 307 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 CAVIN4Q5BKX8 364 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 KLHL7Q8IXQ5 586 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 GPT2Q8TD30 523 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 EEF2P13639 858 aaKnown RBP13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 RPS6KB1P23443 525 aa13.08□□□□□ -0.32
CSPG4P12-201ENST00000558282 EPHB4P54760 987 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms