RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 DDTLA6NHG4 134 aaPredicted RBP19.76■□□□□ 0.75
SCFD1-224ENST00000557713 ECM2O94769 699 aaPredicted RBP19.76■□□□□ 0.75
SCFD1-224ENST00000557713 MYCP01106 439 aaPredicted RBP19.76■□□□□ 0.75
SCFD1-224ENST00000557713 HABP4Q5JVS0 413 aaKnown RBP19.76■□□□□ 0.75
SCFD1-224ENST00000557713 SPTY2D1Q68D10 685 aaPredicted RBP19.76■□□□□ 0.75
SCFD1-224ENST00000557713 DZIP1Q86YF9 867 aaKnown RBP19.76■□□□□ 0.75
SCFD1-224ENST00000557713 SCYL3Q8IZE3 742 aa19.76■□□□□ 0.75
SCFD1-224ENST00000557713 DDX4Q9NQI0 724 aaKnown RBP19.76■□□□□ 0.75
SCFD1-224ENST00000557713 ZHX2Q9Y6X8 837 aa19.76■□□□□ 0.75
SCFD1-224ENST00000557713 MYH2Q9UKX2 1941 aa19.76■□□□□ 0.75
SCFD1-224ENST00000557713 CCER2I3L3R5 266 aa19.75■□□□□ 0.75
SCFD1-224ENST00000557713 BCRP11274 1271 aa19.75■□□□□ 0.75
SCFD1-224ENST00000557713 PTPRAP18433 802 aa19.75■□□□□ 0.75
SCFD1-224ENST00000557713 OSBPP22059 807 aa19.75■□□□□ 0.75
SCFD1-224ENST00000557713 BTDP43251 543 aa19.75■□□□□ 0.75
SCFD1-224ENST00000557713 MVPQ14764 893 aaKnown RBP19.75■□□□□ 0.75
SCFD1-224ENST00000557713 ZNF384Q8TF68 577 aa19.75■□□□□ 0.75
SCFD1-224ENST00000557713 AFG3L2Q9Y4W6 797 aa19.75■□□□□ 0.75
SCFD1-224ENST00000557713 GPR75-ASB3A0A0A6YYF3 556 aa19.74■□□□□ 0.75
SCFD1-224ENST00000557713 A0A0G2JLL6 359 aaPredicted RBP19.74■□□□□ 0.75
SCFD1-224ENST00000557713 FMNL1O95466 1100 aaPredicted RBP19.74■□□□□ 0.75
SCFD1-224ENST00000557713 SLURP2P0DP57 97 aa19.74■□□□□ 0.75
SCFD1-224ENST00000557713 CYP2C8P10632 490 aa19.74■□□□□ 0.75
SCFD1-224ENST00000557713 HOXD10P28358 340 aa19.74■□□□□ 0.75
SCFD1-224ENST00000557713 MECOMQ03112 1051 aa19.74■□□□□ 0.75
SCFD1-224ENST00000557713 PRRT2Q7Z6L0 340 aaPredicted RBP19.74■□□□□ 0.75
SCFD1-224ENST00000557713 ZSCAN29Q8IWY8 852 aaPredicted RBP19.74■□□□□ 0.75
SCFD1-224ENST00000557713 PARK7Q99497 189 aaKnown RBP19.74■□□□□ 0.75
SCFD1-224ENST00000557713 PICK1Q9NRD5 415 aa19.74■□□□□ 0.75
SCFD1-224ENST00000557713 DOCK2Q92608 1830 aa19.74■□□□□ 0.75
SCFD1-224ENST00000557713 MROH7-TTC4A0A0A0MT08 1334 aa19.74■□□□□ 0.75
SCFD1-224ENST00000557713 CTNND1O60716 968 aaKnown RBP19.73■□□□□ 0.75
SCFD1-224ENST00000557713 RHBDL3P58872 404 aa19.73■□□□□ 0.75
SCFD1-224ENST00000557713 MTFR1Q15390 333 aa19.73■□□□□ 0.75
SCFD1-224ENST00000557713 ERICH6Q7L0X2 663 aa19.73■□□□□ 0.75
SCFD1-224ENST00000557713 FASTKD5Q7L8L6 764 aaKnown RBP19.73■□□□□ 0.75
SCFD1-224ENST00000557713 NEUROD6Q96NK8 337 aa19.73■□□□□ 0.75
SCFD1-224ENST00000557713 HMG20BQ9P0W2 317 aa19.73■□□□□ 0.75
SCFD1-224ENST00000557713 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
SCFD1-224ENST00000557713 PICALMQ13492 652 aa19.72■□□□□ 0.75
SCFD1-224ENST00000557713 TNNQ9UQP3 1299 aa19.72■□□□□ 0.75
SCFD1-224ENST00000557713 IPO8O15397 1037 aaKnown RBP19.71■□□□□ 0.75
SCFD1-224ENST00000557713 TBC1D12O60347 775 aa19.71■□□□□ 0.75
SCFD1-224ENST00000557713 TRIM27P14373 513 aa19.71■□□□□ 0.75
SCFD1-224ENST00000557713 GRK4P32298 578 aa19.71■□□□□ 0.75
SCFD1-224ENST00000557713 SPATA5Q8NB90 893 aa19.71■□□□□ 0.75
SCFD1-224ENST00000557713 RAET1EQ8TD07 263 aa19.71■□□□□ 0.75
SCFD1-224ENST00000557713 SLC45A1Q9Y2W3 748 aa19.71■□□□□ 0.75
SCFD1-224ENST00000557713 MYPNQ86TC9 1320 aa19.71■□□□□ 0.75
SCFD1-224ENST00000557713 GNAI2P04899 355 aa19.7■□□□□ 0.74
SCFD1-224ENST00000557713 PI16Q6UXB8 463 aa19.7■□□□□ 0.74
SCFD1-224ENST00000557713 GADL1Q6ZQY3 521 aa19.7■□□□□ 0.74
SCFD1-224ENST00000557713 TBC1D9Q6ZT07 1266 aa19.7■□□□□ 0.74
SCFD1-224ENST00000557713 NSUN4Q96CB9 384 aaKnown RBP19.7■□□□□ 0.74
SCFD1-224ENST00000557713 SHISA4Q96DD7 197 aa19.7■□□□□ 0.74
SCFD1-224ENST00000557713 PNMA6EA0A0J9YXQ4 647 aa19.69■□□□□ 0.74
SCFD1-224ENST00000557713 BCAR3O75815 825 aa19.69■□□□□ 0.74
SCFD1-224ENST00000557713 MAP4K4O95819 1239 aaPredicted RBP19.69■□□□□ 0.74
SCFD1-224ENST00000557713 LDHCP07864 332 aa19.69■□□□□ 0.74
SCFD1-224ENST00000557713 ARID4AP29374 1257 aaPredicted RBP19.69■□□□□ 0.74
SCFD1-224ENST00000557713 FCGRTP55899 365 aa19.69■□□□□ 0.74
SCFD1-224ENST00000557713 PRKCZQ05513 592 aa19.69■□□□□ 0.74
SCFD1-224ENST00000557713 ATF7IPQ6VMQ6 1270 aa19.69■□□□□ 0.74
SCFD1-224ENST00000557713 GSTO1P78417 241 aa19.68■□□□□ 0.74
SCFD1-224ENST00000557713 G3BP1Q13283 466 aaKnown RBP eCLIP19.68■□□□□ 0.74
SCFD1-224ENST00000557713 GORABQ5T7V8 394 aa19.68■□□□□ 0.74
SCFD1-224ENST00000557713 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.68■□□□□ 0.74
SCFD1-224ENST00000557713 GABRQQ9UN88 632 aa19.68■□□□□ 0.74
SCFD1-224ENST00000557713 PHIPQ8WWQ0 1821 aa19.67■□□□□ 0.74
SCFD1-224ENST00000557713 GJB1P08034 283 aa19.67■□□□□ 0.74
SCFD1-224ENST00000557713 CCL5P13501 91 aa19.67■□□□□ 0.74
SCFD1-224ENST00000557713 CCDC84Q86UT8 332 aaPredicted RBP19.67■□□□□ 0.74
SCFD1-224ENST00000557713 NKX2-3Q8TAU0 364 aa19.67■□□□□ 0.74
SCFD1-224ENST00000557713 FRAT1Q92837 279 aaPredicted RBP19.67■□□□□ 0.74
SCFD1-224ENST00000557713 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.67■□□□□ 0.745e-6■■■□□ 17
SCFD1-224ENST00000557713 DOCK1Q14185 1865 aa19.67■□□□□ 0.74
SCFD1-224ENST00000557713 TRIM75PA6NK02 468 aa19.66■□□□□ 0.74
SCFD1-224ENST00000557713 MCAMP43121 646 aa19.66■□□□□ 0.74
SCFD1-224ENST00000557713 GJA8P48165 433 aa19.66■□□□□ 0.74
SCFD1-224ENST00000557713 RAI14Q9P0K7 980 aa19.66■□□□□ 0.74
SCFD1-224ENST00000557713 COLQQ9Y215 455 aaPredicted RBP19.66■□□□□ 0.74
SCFD1-224ENST00000557713 COL2A1P02458 1487 aaPredicted RBP19.66■□□□□ 0.74
SCFD1-224ENST00000557713 FAM196BA6NMK8 535 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 H0YGN5 161 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 UQCRFS1P1P0C7P4 283 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 UBXN2AP68543 259 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 UBE2Q1Q7Z7E8 422 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 SLAIN1Q8ND83 568 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 CLUAP1Q96AJ1 413 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 RNF208Q9H0X6 261 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 OSBPL5Q9H0X9 879 aaPredicted RBP19.65■□□□□ 0.74
SCFD1-224ENST00000557713 BIN2Q9UBW5 565 aaPredicted RBP19.65■□□□□ 0.74
SCFD1-224ENST00000557713 AGTPBP1Q9UPW5 1226 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 MGAMO43451 1857 aa19.65■□□□□ 0.74
SCFD1-224ENST00000557713 PTPRFP10586 1907 aa19.64■□□□□ 0.74
SCFD1-224ENST00000557713 FLT3LGP49771 235 aa19.64■□□□□ 0.73
SCFD1-224ENST00000557713 RRP1BQ14684 758 aaKnown RBP19.64■□□□□ 0.73
SCFD1-224ENST00000557713 TREML2Q5T2D2 321 aa19.64■□□□□ 0.73
SCFD1-224ENST00000557713 GPR108Q9NPR9 543 aa19.64■□□□□ 0.73
SCFD1-224ENST00000557713 ADCY3O60266 1144 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms