RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 USP26Q9BXU7 913 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 GINM1Q9NU53 330 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 KCNK4Q9NYG8 393 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 SYNGAP1Q96PV0 1343 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 TLR3O15455 904 aaKnown RBP6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 ZNF862O60290 1169 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 CTSBP07858 339 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 FGRP09769 529 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 SLFN14P0C7P3 912 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 NASPP49321 788 aaPredicted RBP6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 ZNF165P49910 485 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 PDE3AQ14432 1141 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 DUOXA2Q1HG44 320 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 SEZ6Q53EL9 994 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 EXOSC6Q5RKV6 272 aaKnown RBP6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 IGF2-ASQ6U949 168 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 REC114Q7Z4M0 266 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 FBXO27Q8NI29 283 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 ACSBG1Q96GR2 724 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 STRIP2Q9ULQ0 834 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 PCDHA4Q9UN74 947 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 SNCAIPQ9Y6H5 919 aa6.78□□□□□ -1.32
EFCAB11-213ENST00000557685 MEGF11A6BM72 1044 aa6.77□□□□□ -1.33
EFCAB11-213ENST00000557685 LIG1P18858 919 aa6.77□□□□□ -1.33
EFCAB11-213ENST00000557685 GTF2F1P35269 517 aaKnown RBP eCLIP6.77□□□□□ -1.33
EFCAB11-213ENST00000557685 RBL2Q08999 1139 aa6.77□□□□□ -1.33
EFCAB11-213ENST00000557685 KIF4BQ2VIQ3 1234 aa6.77□□□□□ -1.33
EFCAB11-213ENST00000557685 ZMYM1Q5SVZ6 1142 aa6.77□□□□□ -1.33
EFCAB11-213ENST00000557685 WDR89Q96FK6 387 aaPredicted RBP6.77□□□□□ -1.33
EFCAB11-213ENST00000557685 GFRA2O00451 464 aa6.76□□□□□ -1.33
EFCAB11-213ENST00000557685 DLGAP3O95886 979 aa6.76□□□□□ -1.33
EFCAB11-213ENST00000557685 ELNP15502 786 aa6.76□□□□□ -1.33
EFCAB11-213ENST00000557685 MCM4P33991 863 aa6.76□□□□□ -1.33
EFCAB11-213ENST00000557685 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.76□□□□□ -1.33
EFCAB11-213ENST00000557685 HDXQ7Z353 690 aa6.76□□□□□ -1.33
EFCAB11-213ENST00000557685 RAD18Q9NS91 495 aa6.76□□□□□ -1.33
EFCAB11-213ENST00000557685 TACC3Q9Y6A5 838 aa6.76□□□□□ -1.33
EFCAB11-213ENST00000557685 AOC2O75106 756 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 SPATA31C1P0DKV0 1188 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 ITGB7P26010 798 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 INPP5AQ14642 412 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 ZC3H12AQ5D1E8 599 aaKnown RBP6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 PRRT3Q5FWE3 981 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 SOGA3Q5TF21 947 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 DHX38Q92620 1227 aaKnown RBP6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 WDR18Q9BV38 432 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 HIRIP3Q9BW71 556 aaPredicted RBP6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 TMPRSS13Q9BYE2 586 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 MRPL18Q9H0U6 180 aaKnown RBP6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 EHMT1Q9H9B1 1298 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 BRMS1Q9HCU9 246 aa6.75□□□□□ -1.33
EFCAB11-213ENST00000557685 STK10O94804 968 aaKnown RBP6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 ATE1O95260 518 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 SELPP16109 830 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 CYFIP1Q7L576 1253 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 TMEM130Q8N3G9 435 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 UBASH3BQ8TF42 649 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 CPLX3Q8WVH0 158 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 ELMO3Q96BJ8 720 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 RUSC1Q9BVN2 902 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 SRRTQ9BXP5 876 aaKnown RBP6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 PRR36Q9H6K5 1346 aa6.74□□□□□ -1.33
EFCAB11-213ENST00000557685 SCO2A0A1W2PP80 73 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 WISP1O95388 367 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 IMPDH2P12268 514 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 CDK8P49336 464 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 WIPI1Q5MNZ9 446 aaPredicted RBP6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 NUTM2GQ5VZR2 741 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 LRFN4Q6PJG9 635 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 KIAA1211Q6ZU35 1233 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 SMG8Q8ND04 991 aaKnown RBP6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 PLPPR2Q96GM1 343 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 RNF208Q9H0X6 261 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 CYP4F12Q9HCS2 524 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 POLR3KQ9Y2Y1 108 aaPredicted RBP6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 PCDHGC5Q9Y5F6 944 aa6.73□□□□□ -1.33
EFCAB11-213ENST00000557685 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 APBA3O96018 575 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 ERVK-24P63145 666 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 ID3Q02535 119 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 CLCQ05315 142 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 RING1Q06587 406 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 GK5Q6ZS86 529 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 ACAD11Q709F0 780 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 C12orf40Q86WS4 652 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 FERD3LQ96RJ6 166 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 CRBNQ96SW2 442 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 ZNRF3Q9ULT6 936 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 PPT2Q9UMR5 302 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 PCDHB14Q9Y5E9 798 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 SHROOM4Q9ULL8 1493 aa6.72□□□□□ -1.33
EFCAB11-213ENST00000557685 DCDC2CA8MYV0 355 aa6.71□□□□□ -1.34
EFCAB11-213ENST00000557685 GRIN3BO60391 1043 aa6.71□□□□□ -1.34
EFCAB11-213ENST00000557685 GIPRP48546 466 aa6.71□□□□□ -1.34
EFCAB11-213ENST00000557685 EIF6P56537 245 aaKnown RBP6.71□□□□□ -1.34
EFCAB11-213ENST00000557685 PDE4BQ07343 736 aa6.71□□□□□ -1.34
EFCAB11-213ENST00000557685 LRRFIP1Q32MZ4 808 aaKnown RBP6.71□□□□□ -1.34
EFCAB11-213ENST00000557685 AKAP4Q5JQC9 854 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms