RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 FOXP2O15409 715 aa18.34■□□□□ 0.53
NEDD1-213ENST00000557644 SLC4A8Q2Y0W8 1093 aa18.34■□□□□ 0.53
NEDD1-213ENST00000557644 CCDC171Q6TFL3 1326 aa18.33■□□□□ 0.53
NEDD1-213ENST00000557644 TNFAIP1Q13829 316 aa18.33■□□□□ 0.53
NEDD1-213ENST00000557644 CDC37L1Q7L3B6 337 aa18.33■□□□□ 0.53
NEDD1-213ENST00000557644 MKRN1Q9UHC7 482 aaKnown RBP18.33■□□□□ 0.53
NEDD1-213ENST00000557644 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.53
NEDD1-213ENST00000557644 GSG1L2A8MUP6 293 aa18.33■□□□□ 0.52
NEDD1-213ENST00000557644 SH3BP5LQ7L8J4 393 aa18.33■□□□□ 0.52
NEDD1-213ENST00000557644 FAM83AQ86UY5 434 aa18.33■□□□□ 0.52
NEDD1-213ENST00000557644 OSBPL5Q9H0X9 879 aaPredicted RBP18.33■□□□□ 0.52
NEDD1-213ENST00000557644 DCP1AQ9NPI6 582 aaPredicted RBP18.33■□□□□ 0.52
NEDD1-213ENST00000557644 SGSM2O43147 1006 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 TOMM70O94826 608 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 FAM151AQ8WW52 585 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 ESYT1Q9BSJ8 1104 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 EPB41L4AQ9HCS5 686 aaPredicted RBP18.32■□□□□ 0.52
NEDD1-213ENST00000557644 CDK5RAP2Q96SN8 1893 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
NEDD1-213ENST00000557644 ENTPD3O75355 529 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 APPP05067 770 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 TNNI2P48788 182 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 TEPSINQ96N21 525 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 PALD1Q9ULE6 856 aa18.32■□□□□ 0.52
NEDD1-213ENST00000557644 EVX2Q03828 476 aa18.31■□□□□ 0.52
NEDD1-213ENST00000557644 ZSCAN29Q8IWY8 852 aaPredicted RBP18.31■□□□□ 0.52
NEDD1-213ENST00000557644 PATL2C9JE40 543 aaKnown RBP18.31■□□□□ 0.52
NEDD1-213ENST00000557644 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
NEDD1-213ENST00000557644 SLURP2P0DP57 97 aa18.31■□□□□ 0.52
NEDD1-213ENST00000557644 HSPD1P10809 573 aaKnown RBP18.31■□□□□ 0.52
NEDD1-213ENST00000557644 GNAT2P19087 354 aa18.31■□□□□ 0.52
NEDD1-213ENST00000557644 ATP8A2Q9NTI2 1148 aa18.31■□□□□ 0.52
NEDD1-213ENST00000557644 MCM9Q9NXL9 1143 aa18.31■□□□□ 0.52
NEDD1-213ENST00000557644 RAD50Q92878 1312 aa18.3■□□□□ 0.52
NEDD1-213ENST00000557644 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
NEDD1-213ENST00000557644 NBPF12Q5TAG4 269 aaPredicted RBP18.3■□□□□ 0.52
NEDD1-213ENST00000557644 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
NEDD1-213ENST00000557644 SMIM22K7EJ46 135 aa18.3■□□□□ 0.52
NEDD1-213ENST00000557644 IFNL3Q8IZI9 196 aa18.3■□□□□ 0.52
NEDD1-213ENST00000557644 SMC1BQ8NDV3 1235 aa18.3■□□□□ 0.52
NEDD1-213ENST00000557644 RBM46Q8TBY0 533 aaKnown RBP18.3■□□□□ 0.52
NEDD1-213ENST00000557644 CDCA5Q96FF9 252 aa18.3■□□□□ 0.52
NEDD1-213ENST00000557644 CYP2D6P10635 497 aa18.29■□□□□ 0.52
NEDD1-213ENST00000557644 CYP2D7A0A087X1C5 515 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
NEDD1-213ENST00000557644 PTH1RQ03431 593 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 CSRNP1Q96S65 589 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 FZD1Q9UP38 647 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 PPP2R3BQ9Y5P8 575 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 FOCADQ5VW36 1801 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 USP17L12C9JPN9 530 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 USP17L21D6R901 530 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 TDO2P48775 406 aa18.28■□□□□ 0.52
NEDD1-213ENST00000557644 PLCD1P51178 756 aa18.27■□□□□ 0.52
NEDD1-213ENST00000557644 CTR9Q6PD62 1173 aa18.27■□□□□ 0.52
NEDD1-213ENST00000557644 ZNF408Q9H9D4 720 aa18.27■□□□□ 0.52
NEDD1-213ENST00000557644 ATRNL1Q5VV63 1379 aa18.27■□□□□ 0.52
NEDD1-213ENST00000557644 FGAP02671 866 aa18.27■□□□□ 0.52
NEDD1-213ENST00000557644 MIGA2Q7L4E1 593 aa18.27■□□□□ 0.52
NEDD1-213ENST00000557644 SSC5DA1L4H1 1573 aa18.27■□□□□ 0.51
NEDD1-213ENST00000557644 BAZ2AQ9UIF9 1905 aaKnown RBP18.27■□□□□ 0.51
NEDD1-213ENST00000557644 POLR3DP05423 398 aaPredicted RBP18.26■□□□□ 0.51
NEDD1-213ENST00000557644 GIMAP6Q6P9H5 292 aa18.26■□□□□ 0.51
NEDD1-213ENST00000557644 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
NEDD1-213ENST00000557644 NACAP1Q9BZK3 213 aa18.26■□□□□ 0.51
NEDD1-213ENST00000557644 NAPBQ9H115 298 aa18.26■□□□□ 0.51
NEDD1-213ENST00000557644 ANO2Q9NQ90 1003 aa18.26■□□□□ 0.51
NEDD1-213ENST00000557644 RPAP1Q9BWH6 1393 aaPredicted RBP18.26■□□□□ 0.51
NEDD1-213ENST00000557644 FAM196BA6NMK8 535 aa18.26■□□□□ 0.51
NEDD1-213ENST00000557644 PRKG1Q13976 671 aa18.26■□□□□ 0.51
NEDD1-213ENST00000557644 DDX60LQ5H9U9 1706 aaKnown RBP18.25■□□□□ 0.51
NEDD1-213ENST00000557644 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
NEDD1-213ENST00000557644 DSCC1Q9BVC3 393 aa18.25■□□□□ 0.51
NEDD1-213ENST00000557644 LSG1Q9H089 658 aaKnown RBP18.25■□□□□ 0.51
NEDD1-213ENST00000557644 DHX36Q9H2U1 1008 aaKnown RBP18.25■□□□□ 0.51
NEDD1-213ENST00000557644 PASKQ96RG2 1323 aa18.25■□□□□ 0.51
NEDD1-213ENST00000557644 MINDY4BA8MYZ0 360 aa18.25■□□□□ 0.51
NEDD1-213ENST00000557644 C8orf34Q49A92 452 aa18.25■□□□□ 0.51
NEDD1-213ENST00000557644 STK11IPQ8N1F8 1099 aa18.25■□□□□ 0.51
NEDD1-213ENST00000557644 C12orf60Q5U649 245 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 PI4KBQ9UBF8 816 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 COL2A1P02458 1487 aaPredicted RBP18.24■□□□□ 0.51
NEDD1-213ENST00000557644 MYH1P12882 1939 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 CELF2O95319 508 aaKnown RBP18.24■□□□□ 0.51
NEDD1-213ENST00000557644 FSTL1Q12841 308 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 ALX1Q15699 326 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 SUPT20HL1Q3ZLR7 823 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 CST9Q5W186 159 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 KIAA1211Q6ZU35 1233 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 MOB2Q70IA6 237 aa18.24■□□□□ 0.51
NEDD1-213ENST00000557644 ARPP21Q9UBL0 812 aaPredicted RBP18.24■□□□□ 0.51
NEDD1-213ENST00000557644 HLA-DOAP06340 250 aa18.23■□□□□ 0.51
NEDD1-213ENST00000557644 TTC6Q86TZ1 520 aa18.23■□□□□ 0.51
NEDD1-213ENST00000557644 DYNLL2Q96FJ2 89 aa18.23■□□□□ 0.51
NEDD1-213ENST00000557644 DNAJC18Q9H819 358 aa18.23■□□□□ 0.51
NEDD1-213ENST00000557644 HAND2P61296 217 aa18.23■□□□□ 0.51
NEDD1-213ENST00000557644 SBK1Q52WX2 424 aa18.23■□□□□ 0.51
NEDD1-213ENST00000557644 MAP4K1Q92918 833 aa18.23■□□□□ 0.51
NEDD1-213ENST00000557644 SLC44A5Q8NCS7 719 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms