RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 ANKIB1Q9P2G1 1089 aa10.31□□□□□ -0.76
RD3L-201ENST00000557640 LAS1LQ9Y4W2 734 aaKnown RBP10.31□□□□□ -0.76
RD3L-201ENST00000557640 CEP290O15078 2479 aa10.31□□□□□ -0.76
RD3L-201ENST00000557640 XDHP47989 1333 aa10.31□□□□□ -0.76
RD3L-201ENST00000557640 WNT10BO00744 389 aa10.3□□□□□ -0.76
RD3L-201ENST00000557640 HOXB7P09629 217 aa10.3□□□□□ -0.76
RD3L-201ENST00000557640 PTPN12Q05209 780 aaKnown RBP10.3□□□□□ -0.76
RD3L-201ENST00000557640 DUSP27Q5VZP5 1158 aa10.3□□□□□ -0.76
RD3L-201ENST00000557640 FBXO46Q6PJ61 603 aaPredicted RBP10.3□□□□□ -0.76
RD3L-201ENST00000557640 HLA-CQ95604 372 aa10.3□□□□□ -0.76
RD3L-201ENST00000557640 MYD88Q99836 296 aa10.3□□□□□ -0.76
RD3L-201ENST00000557640 DBF4Q9UBU7 674 aaPredicted RBP10.3□□□□□ -0.76
RD3L-201ENST00000557640 PCDHAC2Q9Y5I4 1007 aa10.3□□□□□ -0.76
RD3L-201ENST00000557640 TRIOBPQ9H2D6 2365 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 USP17L3A6NCW0 530 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 USP17L4A6NCW7 530 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 GPR37O15354 613 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 PCCAP05165 728 aaPredicted RBP10.29□□□□□ -0.76
RD3L-201ENST00000557640 CD46P15529 392 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 ZEB1P37275 1124 aaPredicted RBP10.29□□□□□ -0.76
RD3L-201ENST00000557640 TM4SF4P48230 202 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 LMOD3Q0VAK6 560 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 PRKG1Q13976 671 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 USP17L1Q7RTZ2 530 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
RD3L-201ENST00000557640 CFHR5Q9BXR6 569 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 HDAC9Q9UKV0 1011 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 IRS2Q9Y4H2 1338 aa10.29□□□□□ -0.76
RD3L-201ENST00000557640 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
RD3L-201ENST00000557640 IGF2BP3O00425 579 aaKnown RBP eCLIP10.28□□□□□ -0.76
RD3L-201ENST00000557640 IGKV5-2P06315 115 aa10.28□□□□□ -0.76
RD3L-201ENST00000557640 ZNF853P0CG23 659 aa10.28□□□□□ -0.76
RD3L-201ENST00000557640 JUNDP17535 347 aa10.28□□□□□ -0.76
RD3L-201ENST00000557640 CTSWP56202 376 aa10.28□□□□□ -0.76
RD3L-201ENST00000557640 NOM1Q5C9Z4 860 aaKnown RBP10.28□□□□□ -0.76
RD3L-201ENST00000557640 CLMNQ96JQ2 1002 aa10.28□□□□□ -0.76
RD3L-201ENST00000557640 GREM2Q9H772 168 aa10.28□□□□□ -0.76
RD3L-201ENST00000557640 HYPKQ9NX55 129 aa10.28□□□□□ -0.76
RD3L-201ENST00000557640 COL1A1P02452 1464 aaPredicted RBP10.28□□□□□ -0.76
RD3L-201ENST00000557640 PDE8AO60658 829 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 FKTNO75072 461 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 GJA5P36382 358 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 PKN2Q16513 984 aaKnown RBP10.27□□□□□ -0.77
RD3L-201ENST00000557640 CCDC152Q4G0S7 254 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 HABP4Q5JVS0 413 aaKnown RBP10.27□□□□□ -0.77
RD3L-201ENST00000557640 LDLRAD1Q5T700 205 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
RD3L-201ENST00000557640 OTOP1Q7RTM1 612 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 CERS5Q8N5B7 392 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 KCTD17Q8N5Z5 321 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 MINPP1Q9UNW1 487 aa10.27□□□□□ -0.77
RD3L-201ENST00000557640 SNAP23O00161 211 aa10.26□□□□□ -0.77
RD3L-201ENST00000557640 ELL2O00472 640 aaPredicted RBP10.26□□□□□ -0.77
RD3L-201ENST00000557640 ATP2B4P23634 1241 aa10.26□□□□□ -0.77
RD3L-201ENST00000557640 USP46P62068 366 aa10.26□□□□□ -0.77
RD3L-201ENST00000557640 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
RD3L-201ENST00000557640 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
RD3L-201ENST00000557640 ANKRD18AQ8IVF6 992 aa10.26□□□□□ -0.77
RD3L-201ENST00000557640 C8orf58Q8NAV2 365 aa10.26□□□□□ -0.77
RD3L-201ENST00000557640 NUDT12Q9BQG2 462 aa10.26□□□□□ -0.77
RD3L-201ENST00000557640 PNNQ9H307 717 aaKnown RBP10.26□□□□□ -0.77
RD3L-201ENST00000557640 CWC25Q9NXE8 425 aaPredicted RBP10.26□□□□□ -0.77
RD3L-201ENST00000557640 CCT4P50991 539 aaKnown RBP10.25□□□□□ -0.77
RD3L-201ENST00000557640 FXR1P51114 621 aaKnown RBP eCLIP10.25□□□□□ -0.77
RD3L-201ENST00000557640 PODNQ7Z5L7 613 aa10.25□□□□□ -0.77
RD3L-201ENST00000557640 KIAA0825Q8IV33 1275 aa10.25□□□□□ -0.77
RD3L-201ENST00000557640 CCDC191Q8NCU4 936 aa10.25□□□□□ -0.77
RD3L-201ENST00000557640 TTLL11Q8NHH1 800 aa10.25□□□□□ -0.77
RD3L-201ENST00000557640 RUNDC1Q96C34 613 aa10.25□□□□□ -0.77
RD3L-201ENST00000557640 METTL22Q9BUU2 404 aaPredicted RBP10.25□□□□□ -0.77
RD3L-201ENST00000557640 LAMA3Q16787 3333 aa10.25□□□□□ -0.77
RD3L-201ENST00000557640 COL6A3P12111 3177 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 SREBF2Q12772 1141 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 CWF19L2Q2TBE0 894 aaKnown RBP10.24□□□□□ -0.77
RD3L-201ENST00000557640 STRIP1Q5VSL9 837 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 TSPYL6Q8N831 410 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 CD99L2Q8TCZ2 262 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
RD3L-201ENST00000557640 WNK4Q96J92 1243 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 ANGEL1Q9UNK9 670 aaKnown RBP10.24□□□□□ -0.77
RD3L-201ENST00000557640 ADAMTS8Q9UP79 889 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 MAP3K2Q9Y2U5 619 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 TRIM17Q9Y577 477 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 CACNA1FO60840 1977 aa10.24□□□□□ -0.77
RD3L-201ENST00000557640 MYBBP1AQ9BQG0 1328 aaKnown RBP10.24□□□□□ -0.77
RD3L-201ENST00000557640 ALPK3Q96L96 1907 aa10.23□□□□□ -0.77
RD3L-201ENST00000557640 KCNMA1Q12791 1236 aa10.23□□□□□ -0.77
RD3L-201ENST00000557640 CRHR2Q13324 411 aa10.23□□□□□ -0.77
RD3L-201ENST00000557640 BSDC1Q9NW68 430 aaPredicted RBP10.23□□□□□ -0.77
RD3L-201ENST00000557640 CLRN2A0PK11 232 aa10.22□□□□□ -0.77
RD3L-201ENST00000557640 HOXA2O43364 376 aa10.22□□□□□ -0.77
RD3L-201ENST00000557640 EN2P19622 333 aaPredicted RBP10.22□□□□□ -0.77
RD3L-201ENST00000557640 CASP7P55210 303 aa10.22□□□□□ -0.77
RD3L-201ENST00000557640 SH3BP2P78314 561 aa10.22□□□□□ -0.77
RD3L-201ENST00000557640 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
RD3L-201ENST00000557640 MAP3K11Q16584 847 aa10.22□□□□□ -0.77
RD3L-201ENST00000557640 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
RD3L-201ENST00000557640 G2E3Q7L622 706 aa10.22□□□□□ -0.77
RD3L-201ENST00000557640 APOBEC3FQ8IUX4 373 aaKnown RBP10.22□□□□□ -0.77
RD3L-201ENST00000557640 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms