RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 FZD1Q9UP38 647 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 PHIPQ8WWQ0 1821 aa12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 COL2A1P02458 1487 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 PPP1R12BO60237 982 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 PDE1AP54750 535 aa12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 ARMC9Q7Z3E5 817 aa12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 DNAJC5GQ8N7S2 189 aa12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 ZNF532Q9HCE3 1301 aa12.82□□□□□ -0.36
HNRNPC-232ENST00000557442 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 ENTPD3O75355 529 aa12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 PPP4CP60510 307 aa12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 DYNLL1P63167 89 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 CYP4F22Q6NT55 531 aa12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 ZSCAN29Q8IWY8 852 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 HOOK2Q96ED9 719 aa12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 CAPNS2Q96L46 248 aa12.81□□□□□ -0.36
HNRNPC-232ENST00000557442 MAGEB6P1A0A0J9YX57 407 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 TCRBV5S4A2TA0A5A2 114 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 ADD2P35612 726 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 ECE1P42892 770 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 VEGFBP49765 207 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 RGMBQ6NW40 437 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 CERS3Q8IU89 383 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 ZFPM1Q8IX07 1006 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 KBTBD3Q8NAB2 608 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 CSRNP1Q96S65 589 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
HNRNPC-232ENST00000557442 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 ZNF157P51786 506 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 SLFNL1Q499Z3 407 aa12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 DCAF15Q66K64 600 aa12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 FSD1Q9BTV5 496 aa12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 OSBPL5Q9H0X9 879 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 FLT1P17948 1338 aa12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
HNRNPC-232ENST00000557442 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-232ENST00000557442 CHGBP05060 677 aa12.78□□□□□ -0.36
HNRNPC-232ENST00000557442 USP5P45974 858 aa12.78□□□□□ -0.36
HNRNPC-232ENST00000557442 UBE3CQ15386 1083 aa12.78□□□□□ -0.36
HNRNPC-232ENST00000557442 MAP3K11Q16584 847 aa12.78□□□□□ -0.36
HNRNPC-232ENST00000557442 MIGA2Q7L4E1 593 aa12.78□□□□□ -0.36
HNRNPC-232ENST00000557442 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
HNRNPC-232ENST00000557442 RIOK1Q9BRS2 568 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-232ENST00000557442 LAMA4Q16363 1823 aa12.77□□□□□ -0.36
HNRNPC-232ENST00000557442 DDTLA6NHG4 134 aaPredicted RBP12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 MBD4O95243 580 aa12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 SLC10A3P09131 477 aa12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 SH3BP5LQ7L8J4 393 aa12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 RASAL3Q86YV0 1011 aa12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 LCORLQ8N3X6 602 aa12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 CCDC102AQ96A19 550 aa12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 WRNIP1Q96S55 665 aa12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 ZNF341Q9BYN7 854 aa12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-232ENST00000557442 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 AOC2O75106 756 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 ZFYP08048 801 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 PDE4AP27815 886 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 NOGQ13253 232 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 LDLRAD1Q5T700 205 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 ANKRD13AQ8IZ07 590 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.76□□□□□ -0.372e-14■□□□□ 9.1
HNRNPC-232ENST00000557442 APPBP2Q92624 585 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 AIDAQ96BJ3 306 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 EVI5LQ96CN4 794 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 CCDC136Q96JN2 1154 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 SAP30BPQ9UHR5 308 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 CSADQ9Y600 493 aa12.76□□□□□ -0.37
HNRNPC-232ENST00000557442 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-232ENST00000557442 VGLL4Q14135 290 aa12.75□□□□□ -0.37
HNRNPC-232ENST00000557442 SLC4A8Q2Y0W8 1093 aa12.75□□□□□ -0.37
HNRNPC-232ENST00000557442 JMYQ8N9B5 988 aa12.75□□□□□ -0.37
HNRNPC-232ENST00000557442 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
HNRNPC-232ENST00000557442 PUS7LQ9H0K6 701 aaKnown RBP12.75□□□□□ -0.37
HNRNPC-232ENST00000557442 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
HNRNPC-232ENST00000557442 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 UNCXA6NJT0 531 aa12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 FAM196BA6NMK8 535 aa12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 HLA-DOAP06340 250 aa12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 MAP3K9P80192 1104 aa12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 MKRN3Q13064 507 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 RILPL2Q969X0 211 aa12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms