RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 TM4SF4P48230 202 aa16.77■□□□□ 0.28
VPS33B-206ENST00000557358 VGLL4Q14135 290 aa16.77■□□□□ 0.28
VPS33B-206ENST00000557358 OPTNQ96CV9 577 aa16.77■□□□□ 0.28
VPS33B-206ENST00000557358 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.77■□□□□ 0.28
VPS33B-206ENST00000557358 PIH1D3Q9NQM4 214 aaKnown RBP16.77■□□□□ 0.28
VPS33B-206ENST00000557358 RNF186Q9NXI6 227 aa16.77■□□□□ 0.28
VPS33B-206ENST00000557358 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.28
VPS33B-206ENST00000557358 COL13A1Q5TAT6 717 aaPredicted RBP16.76■□□□□ 0.27
VPS33B-206ENST00000557358 ERO1BQ86YB8 467 aa16.76■□□□□ 0.27
VPS33B-206ENST00000557358 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
VPS33B-206ENST00000557358 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
VPS33B-206ENST00000557358 TRIM34Q9BYJ4 488 aa16.76■□□□□ 0.27
VPS33B-206ENST00000557358 GOLIM4O00461 696 aa16.75■□□□□ 0.27
VPS33B-206ENST00000557358 ATP5JP18859 108 aa16.75■□□□□ 0.27
VPS33B-206ENST00000557358 GTF2A2P52657 109 aa16.75■□□□□ 0.27
VPS33B-206ENST00000557358 RHBDL3P58872 404 aa16.75■□□□□ 0.27
VPS33B-206ENST00000557358 PPP4CP60510 307 aa16.75■□□□□ 0.27
VPS33B-206ENST00000557358 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
VPS33B-206ENST00000557358 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
VPS33B-206ENST00000557358 PICK1Q9NRD5 415 aa16.75■□□□□ 0.27
VPS33B-206ENST00000557358 TSKSQ9UJT2 592 aa16.75■□□□□ 0.27
VPS33B-206ENST00000557358 USP5P45974 858 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 SLC9C2Q5TAH2 1124 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 ZSCAN25Q6NSZ9 544 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 SH3RF3Q8TEJ3 882 aaPredicted RBP16.74■□□□□ 0.27
VPS33B-206ENST00000557358 ZNF384Q8TF68 577 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 OTUD5Q96G74 571 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 OSBPL5Q9H0X9 879 aaPredicted RBP16.74■□□□□ 0.27
VPS33B-206ENST00000557358 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 ECHDC1Q9NTX5 307 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 PAG1Q9NWQ8 432 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
VPS33B-206ENST00000557358 DOCK2Q92608 1830 aa16.73■□□□□ 0.27
VPS33B-206ENST00000557358 SPDYE5A6NIY4 337 aa16.73■□□□□ 0.27
VPS33B-206ENST00000557358 ERC2O15083 957 aa16.73■□□□□ 0.27
VPS33B-206ENST00000557358 SMARCA5O60264 1052 aaPredicted RBP16.73■□□□□ 0.27
VPS33B-206ENST00000557358 HLA-DOAP06340 250 aa16.73■□□□□ 0.27
VPS33B-206ENST00000557358 PPATQ06203 517 aa16.73■□□□□ 0.27
VPS33B-206ENST00000557358 LRRFIP1Q32MZ4 808 aaKnown RBP16.73■□□□□ 0.27
VPS33B-206ENST00000557358 ZKSCAN4Q969J2 545 aaPredicted RBP16.73■□□□□ 0.27
VPS33B-206ENST00000557358 GCC1Q96CN9 775 aa16.73■□□□□ 0.27
VPS33B-206ENST00000557358 PI4KBQ9UBF8 816 aa16.73■□□□□ 0.27
VPS33B-206ENST00000557358 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
VPS33B-206ENST00000557358 MYO5AQ9Y4I1 1855 aaKnown RBP16.72■□□□□ 0.27
VPS33B-206ENST00000557358 OTOFQ9HC10 1997 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 CETPP11597 493 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 PPIL2Q13356 520 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 SNAPC2Q13487 334 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 ZFPM1Q8IX07 1006 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 CRACR2BQ8N4Y2 399 aaPredicted RBP16.72■□□□□ 0.27
VPS33B-206ENST00000557358 TGFBRAP1Q8WUH2 860 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 HAUS7Q99871 368 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 RWDD1Q9H446 243 aaPredicted RBP16.72■□□□□ 0.27
VPS33B-206ENST00000557358 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.72■□□□□ 0.27
VPS33B-206ENST00000557358 DDX4Q9NQI0 724 aaKnown RBP16.72■□□□□ 0.27
VPS33B-206ENST00000557358 HERC5Q9UII4 1024 aaKnown RBP16.72■□□□□ 0.27
VPS33B-206ENST00000557358 ZNF112Q9UJU3 913 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 RFX7Q2KHR2 1363 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 ATRNL1Q5VV63 1379 aa16.72■□□□□ 0.27
VPS33B-206ENST00000557358 COL2A1P02458 1487 aaPredicted RBP16.72■□□□□ 0.27
VPS33B-206ENST00000557358 MAGEB6P1A0A0J9YX57 407 aa16.71■□□□□ 0.27
VPS33B-206ENST00000557358 DDTLA6NHG4 134 aaPredicted RBP16.71■□□□□ 0.27
VPS33B-206ENST00000557358 TBC1D12O60347 775 aa16.71■□□□□ 0.27
VPS33B-206ENST00000557358 NOL9Q5SY16 702 aaKnown RBP16.71■□□□□ 0.27
VPS33B-206ENST00000557358 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.27
VPS33B-206ENST00000557358 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.27
VPS33B-206ENST00000557358 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
VPS33B-206ENST00000557358 SNCAIPQ9Y6H5 919 aa16.71■□□□□ 0.27
VPS33B-206ENST00000557358 CASP8AP2Q9UKL3 1982 aa16.71■□□□□ 0.27
VPS33B-206ENST00000557358 CCL15-CCL14A0A0B4J2E2 113 aa16.7■□□□□ 0.26
VPS33B-206ENST00000557358 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
VPS33B-206ENST00000557358 PDE6AP16499 860 aa16.7■□□□□ 0.26
VPS33B-206ENST00000557358 INPP5BP32019 993 aa16.7■□□□□ 0.26
VPS33B-206ENST00000557358 HDAC1Q13547 482 aaPredicted RBP16.7■□□□□ 0.26
VPS33B-206ENST00000557358 CCL15Q16663 113 aa16.7■□□□□ 0.26
VPS33B-206ENST00000557358 MAPKAPK5Q8IW41 473 aa16.7■□□□□ 0.26
VPS33B-206ENST00000557358 SCYL3Q8IZE3 742 aa16.7■□□□□ 0.26
VPS33B-206ENST00000557358 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
VPS33B-206ENST00000557358 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
VPS33B-206ENST00000557358 ADGRA1Q86SQ6 560 aa16.69■□□□□ 0.26
VPS33B-206ENST00000557358 FOXP4Q8IVH2 680 aaPredicted RBP16.69■□□□□ 0.26
VPS33B-206ENST00000557358 AMOTL1Q8IY63 956 aa16.69■□□□□ 0.26
VPS33B-206ENST00000557358 FLT1P17948 1338 aa16.69■□□□□ 0.26
VPS33B-206ENST00000557358 TTC41PQ6P2S7 1318 aa16.69■□□□□ 0.26
VPS33B-206ENST00000557358 ZNF532Q9HCE3 1301 aa16.69■□□□□ 0.26
VPS33B-206ENST00000557358 TESPA1A2RU30 521 aaPredicted RBP16.68■□□□□ 0.26
VPS33B-206ENST00000557358 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
VPS33B-206ENST00000557358 GJA5P36382 358 aa16.68■□□□□ 0.26
VPS33B-206ENST00000557358 DYNLL1P63167 89 aaKnown RBP16.68■□□□□ 0.26
VPS33B-206ENST00000557358 MAP3K10Q02779 954 aa16.68■□□□□ 0.26
VPS33B-206ENST00000557358 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
VPS33B-206ENST00000557358 SH3BP5LQ7L8J4 393 aa16.68■□□□□ 0.26
VPS33B-206ENST00000557358 TTC6Q86TZ1 520 aa16.68■□□□□ 0.26
VPS33B-206ENST00000557358 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
VPS33B-206ENST00000557358 IRF6O14896 467 aa16.67■□□□□ 0.26
VPS33B-206ENST00000557358 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
VPS33B-206ENST00000557358 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
VPS33B-206ENST00000557358 CFHR5Q9BXR6 569 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms