RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 CLMNQ96JQ2 1002 aa20.28■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■■■□ 21.2
TVP23C-CDRT4-204ENST00000557349 TTC41PQ6P2S7 1318 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 ERC2O15083 957 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 PDE6AP16499 860 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 MX1P20591 662 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 PPP4CP60510 307 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 MKRN3Q13064 507 aaKnown RBP20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 MIGA2Q7L4E1 593 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 OTUD7AQ8TE49 926 aaPredicted RBP20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 SLC10A4Q96EP9 437 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 WRNIP1Q96S55 665 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 ZIC5Q96T25 663 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 ZNF341Q9BYN7 854 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 CSADQ9Y600 493 aa20.27■□□□□ 0.84
TVP23C-CDRT4-204ENST00000557349 UNCXA6NJT0 531 aa20.26■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 NPM3O75607 178 aaKnown RBP20.26■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 KIF23Q02241 960 aaPredicted RBP20.26■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.26■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 ZNF532Q9HCE3 1301 aa20.26■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 IGHDP01880 384 aa20.25■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 MAP3K9P80192 1104 aa20.25■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 SMC5Q8IY18 1101 aa20.25■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 TGFBRAP1Q8WUH2 860 aa20.25■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 OSBPL5Q9H0X9 879 aaPredicted RBP20.25■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 WBP1LQ9NX94 342 aa20.25■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 COL2A1P02458 1487 aaPredicted RBP20.24■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 ATRNL1Q5VV63 1379 aa20.24■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 DDTLA6NHG4 134 aaPredicted RBP20.24■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 VGLL4Q14135 290 aa20.24■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 SH3BP5LQ7L8J4 393 aa20.24■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 MAPKAPK5Q8IW41 473 aa20.24■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 LNPKQ9C0E8 428 aa20.24■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 FLT1P17948 1338 aa20.24■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 MAGEB6P1A0A0J9YX57 407 aa20.23■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 GLRX3O76003 335 aaKnown RBP20.23■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 USP5P45974 858 aa20.23■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 SPRYD7Q5W111 196 aa20.23■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 ZSCAN25Q6NSZ9 544 aa20.23■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.23■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 WNK4Q96J92 1243 aa20.23■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 FOXN1O15353 648 aa20.22■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 ZBTB48P10074 688 aaPredicted RBP20.22■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 ADD2P35612 726 aa20.22■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 PI4K2BQ8TCG2 481 aa20.22■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 PCNTO95613 3336 aa20.22■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 FOCADQ5VW36 1801 aa20.22■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 CDK5RAP2Q96SN8 1893 aa20.22■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 MYH7P12883 1935 aa20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 TCRBV5S4A2TA0A5A2 114 aa20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 SREBF2Q12772 1141 aa20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 REM2Q8IYK8 340 aaPredicted RBP20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 KBTBD3Q8NAB2 608 aa20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 ZKSCAN4Q969J2 545 aaPredicted RBP20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 OPTNQ96CV9 577 aa20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 RIOK1Q9BRS2 568 aaKnown RBP20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 DHX36Q9H2U1 1008 aaKnown RBP20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 SALL3Q9BXA9 1300 aa20.21■□□□□ 0.83
TVP23C-CDRT4-204ENST00000557349 INPP5BP32019 993 aa20.2■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 CHD1LQ86WJ1 897 aa20.2■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 OTUD5Q96G74 571 aa20.2■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 CRNKL1Q9BZJ0 848 aaKnown RBP20.2■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 SNCAIPQ9Y6H5 919 aa20.2■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 CA12O43570 354 aa20.19■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 CTCFP49711 727 aaPredicted RBP20.19■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 NUCB1Q02818 461 aa20.19■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 UBE3CQ15386 1083 aa20.19■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 TRIM34Q9BYJ4 488 aa20.19■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.19■□□□□ 0.823e-6■■■■■ 29.3
TVP23C-CDRT4-204ENST00000557349 SAP30BPQ9UHR5 308 aaKnown RBP20.19■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 MANSC4A6NHS7 340 aaPredicted RBP20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 SPDYE5A6NIY4 337 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 FAM196BA6NMK8 535 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 MBD4O95243 580 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 HLA-DOAP06340 250 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 PDE1AP54750 535 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 SLC4A8Q2Y0W8 1093 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 LRRFIP1Q32MZ4 808 aaKnown RBP20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 SLFNL1Q499Z3 407 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 LCORLQ8N3X6 602 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 CNKSR2Q8WXI2 1034 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 FSD1Q9BTV5 496 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 ARMT1Q9H993 441 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 ZNF112Q9UJU3 913 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 PALD1Q9ULE6 856 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 NAV1Q8NEY1 1877 aa20.18■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 CHGBP05060 677 aa20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 SLURP2P0DP57 97 aa20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 GJA5P36382 358 aa20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 ERO1BQ86YB8 467 aa20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 CRACR2BQ8N4Y2 399 aaPredicted RBP20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 PI4KBQ9UBF8 816 aa20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 STAP2Q9UGK3 403 aa20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 HERC5Q9UII4 1024 aaKnown RBP20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 TSKSQ9UJT2 592 aa20.17■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 TBC1D12O60347 775 aa20.16■□□□□ 0.82
TVP23C-CDRT4-204ENST00000557349 ZFYP08048 801 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms