RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	TCP10	Q12799	353 aa		13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	PPIL2	Q13356	520 aa		13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	INTS3	Q68E01	1043 aa	Known RBP	13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	API5	Q9BZZ5	524 aa	Known RBP	13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ARHGAP39	Q9C0H5	1083 aa		13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ZFYVE28	Q9HCC9	887 aa		13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	TMOD2	Q9NZR1	351 aa		13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	TNN	Q9UQP3	1299 aa		13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ATRNL1	Q5VV63	1379 aa		13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	TLR2	O60603	784 aa		13.91	□□□□□ -0.18
HNRNPC-231	ENST00000557336	SLURP2	P0DP57	97 aa		13.91	□□□□□ -0.18
HNRNPC-231	ENST00000557336	CETP	P11597	493 aa		13.91	□□□□□ -0.18
HNRNPC-231	ENST00000557336	CTGF	P29279	349 aa		13.91	□□□□□ -0.18
HNRNPC-231	ENST00000557336	CCDC102B	Q68D86	513 aa		13.91	□□□□□ -0.18
HNRNPC-231	ENST00000557336	SH3BP5L	Q7L8J4	393 aa		13.91	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ZNF384	Q8TF68	577 aa		13.91	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ZNF341	Q9BYN7	854 aa		13.91	□□□□□ -0.18
HNRNPC-231	ENST00000557336	RANBP2	P49792	3224 aa	Known RBP	13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	SEMA3E	O15041	775 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	LDHB	P07195	334 aa	Known RBP	13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	EN2	P19622	333 aa	Predicted RBP	13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	PPAT	Q06203	517 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	SNAPC2	Q13487	334 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	MTX1	Q13505	466 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	RASGRF1	Q13972	1273 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	DCAF15	Q66K64	600 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ZNF333	Q96JL9	665 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ZCCHC17	Q9NP64	241 aa	Known RBP	13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	USP40	Q9NVE5	1235 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	KCNH4	Q9UQ05	1017 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	PTCH2	Q9Y6C5	1203 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	RFX7	Q2KHR2	1363 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ZSWIM8	A7E2V4	1837 aa		13.9	□□□□□ -0.18
HNRNPC-231	ENST00000557336	GAK	O14976	1311 aa		13.9	□□□□□ -0.19
HNRNPC-231	ENST00000557336	ADGRA2	Q96PE1	1338 aa		13.9	□□□□□ -0.19
HNRNPC-231	ENST00000557336	PHF20L1	A8MW92	1017 aa		13.89	□□□□□ -0.19
HNRNPC-231	ENST00000557336	NOL9	Q5SY16	702 aa	Known RBP	13.89	□□□□□ -0.19
HNRNPC-231	ENST00000557336	C17orf99	Q6UX52	265 aa		13.89	□□□□□ -0.19
HNRNPC-231	ENST00000557336	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.89	□□□□□ -0.19
HNRNPC-231	ENST00000557336	ARHGAP45	Q92619	1136 aa		13.89	□□□□□ -0.19
HNRNPC-231	ENST00000557336	HOOK2	Q96ED9	719 aa		13.89	□□□□□ -0.19
HNRNPC-231	ENST00000557336	DENND2A	Q9ULE3	1009 aa		13.89	□□□□□ -0.19
HNRNPC-231	ENST00000557336	CEP290	O15078	2479 aa		13.89	□□□□□ -0.19
HNRNPC-231	ENST00000557336	CCER2	I3L3R5	266 aa		13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	WDHD1	O75717	1129 aa	Predicted RBP	13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	LACTB	P83111	547 aa	Predicted RBP	13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	MAP3K10	Q02779	954 aa		13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	TFCP2	Q12800	502 aa		13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	GPAT2	Q6NUI2	795 aa		13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	FAM163A	Q96GL9	167 aa	Predicted RBP	13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	IDI2	Q9BXS1	227 aa		13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	DDX4	Q9NQI0	724 aa	Known RBP	13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	GNL3L	Q9NVN8	582 aa	Known RBP	13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336	METRN	Q9UJH8	293 aa		13.88	□□□□□ -0.19
HNRNPC-231	ENST00000557336		A0A1B0GUL7	405 aa		13.87	□□□□□ -0.19
HNRNPC-231	ENST00000557336	RGS3	P49796	1198 aa		13.87	□□□□□ -0.19
HNRNPC-231	ENST00000557336	ANKRD23	Q86SG2	305 aa		13.87	□□□□□ -0.19
HNRNPC-231	ENST00000557336	XAGE2	Q96GT9	111 aa		13.87	□□□□□ -0.19
HNRNPC-231	ENST00000557336	COLQ	Q9Y215	455 aa	Predicted RBP	13.87	□□□□□ -0.19
HNRNPC-231	ENST00000557336	PDS5A	Q29RF7	1337 aa	Known RBP	13.87	□□□□□ -0.19
HNRNPC-231	ENST00000557336	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	MYH13	Q9UKX3	1938 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	DDTL	A6NHG4	134 aa	Predicted RBP	13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	POTEB2	H3BUK9	544 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	PDHX	O00330	501 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	SRGAP3	O43295	1099 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	BCAR3	O75815	825 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	TRIM27	P14373	513 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	RHBDL3	P58872	404 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	PI16	Q6UXB8	463 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	SH3TC2	Q8TF17	1288 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	TRIM47	Q96LD4	638 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	CPA4	Q9UI42	421 aa		13.86	□□□□□ -0.19
HNRNPC-231	ENST00000557336	PNMA6E	A0A0J9YXQ4	647 aa		13.85	□□□□□ -0.19
HNRNPC-231	ENST00000557336	ENTPD3	O75355	529 aa		13.85	□□□□□ -0.19
HNRNPC-231	ENST00000557336	GNAI3	P08754	354 aa		13.85	□□□□□ -0.19
HNRNPC-231	ENST00000557336	HMG20B	Q9P0W2	317 aa		13.85	□□□□□ -0.19
HNRNPC-231	ENST00000557336	GPR75-ASB3	A0A0A6YYF3	556 aa		13.84	□□□□□ -0.19
HNRNPC-231	ENST00000557336	MECOM	Q03112	1051 aa		13.84	□□□□□ -0.19
HNRNPC-231	ENST00000557336	SLC9C1	Q4G0N8	1177 aa		13.84	□□□□□ -0.19
HNRNPC-231	ENST00000557336	ABCF2	Q9UG63	623 aa		13.84	□□□□□ -0.19
HNRNPC-231	ENST00000557336	HDAC5	Q9UQL6	1122 aa		13.84	□□□□□ -0.19
HNRNPC-231	ENST00000557336	CXCL11	O14625	94 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	CYP2C8	P10632	490 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	BCR	P11274	1271 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	PTPRA	P18433	802 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	BTD	P43251	543 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	ARHGEF6	Q15052	776 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	TBC1D9	Q6ZT07	1266 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SCYL3	Q8IZE3	742 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SLC39A7	Q92504	469 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	AFG3L2	Q9Y4W6	797 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	MYH2	Q9UKX2	1941 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	MROH7-TTC4	A0A0A0MT08	1334 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SZT2	Q5T011	3432 aa		13.83	□□□□□ -0.2
HNRNPC-231	ENST00000557336		A0A0G2JLL6	359 aa	Predicted RBP	13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	STK25	O00506	426 aa		13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	MYC	P01106	439 aa	Predicted RBP	13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	OSBP	P22059	807 aa		13.82	□□□□□ -0.2

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