RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RHPN1Q8TCX5 695 aa20.25■□□□□ 0.83
VSX1-207ENST00000557285 NOL10Q9BSC4 688 aaKnown RBP20.25■□□□□ 0.83
VSX1-207ENST00000557285 IDI2Q9BXS1 227 aa20.25■□□□□ 0.83
VSX1-207ENST00000557285 PIH1D3Q9NQM4 214 aaKnown RBP20.25■□□□□ 0.83
VSX1-207ENST00000557285 RFX7Q2KHR2 1363 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 CCL15-CCL14A0A0B4J2E2 113 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 GPR25O00155 361 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 ENTPD3O75355 529 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 ALDH1A1P00352 501 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 SLURP2P0DP57 97 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 PDE3AQ14432 1141 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 CCL15Q16663 113 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 SH3BP5LQ7L8J4 393 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 PTPN18Q99952 460 aa20.24■□□□□ 0.83
VSX1-207ENST00000557285 DDTLA6NHG4 134 aaPredicted RBP20.23■□□□□ 0.83
VSX1-207ENST00000557285 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
VSX1-207ENST00000557285 RHBDL3P58872 404 aa20.23■□□□□ 0.83
VSX1-207ENST00000557285 OTUD7BQ6GQQ9 843 aa20.23■□□□□ 0.83
VSX1-207ENST00000557285 ERO1BQ86YB8 467 aa20.23■□□□□ 0.83
VSX1-207ENST00000557285 TEX11Q8IYF3 940 aa20.23■□□□□ 0.83
VSX1-207ENST00000557285 SH3RF3Q8TEJ3 882 aaPredicted RBP20.23■□□□□ 0.83
VSX1-207ENST00000557285 AATFQ9NY61 560 aaKnown RBP eCLIP20.23■□□□□ 0.83
VSX1-207ENST00000557285 IDH1O75874 414 aaKnown RBP20.22■□□□□ 0.83
VSX1-207ENST00000557285 GTF2A2P52657 109 aa20.22■□□□□ 0.83
VSX1-207ENST00000557285 CLASRPQ8N2M8 674 aaKnown RBP20.22■□□□□ 0.83
VSX1-207ENST00000557285 BRI3BPQ8WY22 251 aa20.22■□□□□ 0.83
VSX1-207ENST00000557285 KIF1BPQ96EK5 621 aa20.22■□□□□ 0.83
VSX1-207ENST00000557285 MS4A4AQ96JQ5 239 aa20.22■□□□□ 0.83
VSX1-207ENST00000557285 ZNF512BQ96KM6 892 aaPredicted RBP20.22■□□□□ 0.83
VSX1-207ENST00000557285 IRF6O14896 467 aa20.21■□□□□ 0.83
VSX1-207ENST00000557285 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
VSX1-207ENST00000557285 CRHR2Q13324 411 aa20.21■□□□□ 0.83
VSX1-207ENST00000557285 CTU1Q7Z7A3 348 aaKnown RBP20.21■□□□□ 0.83
VSX1-207ENST00000557285 ADGRA1Q86SQ6 560 aa20.21■□□□□ 0.83
VSX1-207ENST00000557285 FAM196BA6NMK8 535 aa20.2■□□□□ 0.82
VSX1-207ENST00000557285 FKTNO75072 461 aa20.2■□□□□ 0.82
VSX1-207ENST00000557285 ANTXR1Q9H6X2 564 aa20.2■□□□□ 0.82
VSX1-207ENST00000557285 ATRNL1Q5VV63 1379 aa20.2■□□□□ 0.82
VSX1-207ENST00000557285 TESPA1A2RU30 521 aaPredicted RBP20.19■□□□□ 0.82
VSX1-207ENST00000557285 BAG3O95817 575 aa20.19■□□□□ 0.82
VSX1-207ENST00000557285 CYP7A1P22680 504 aa20.19■□□□□ 0.82
VSX1-207ENST00000557285 PPIL2Q13356 520 aa20.19■□□□□ 0.82
VSX1-207ENST00000557285 SNAPC2Q13487 334 aa20.19■□□□□ 0.82
VSX1-207ENST00000557285 ZNF112Q9UJU3 913 aa20.19■□□□□ 0.82
VSX1-207ENST00000557285 RAB11FIP3O75154 756 aa20.18■□□□□ 0.82
VSX1-207ENST00000557285 CETPP11597 493 aa20.18■□□□□ 0.82
VSX1-207ENST00000557285 TAF1CQ15572 869 aaPredicted RBP20.18■□□□□ 0.82
VSX1-207ENST00000557285 FAM43AQ8N2R8 423 aa20.18■□□□□ 0.82
VSX1-207ENST00000557285 MAGEB6Q8N7X4 407 aa20.18■□□□□ 0.82
VSX1-207ENST00000557285 TGFBRAP1Q8WUH2 860 aa20.18■□□□□ 0.82
VSX1-207ENST00000557285 CFHR5Q9BXR6 569 aa20.18■□□□□ 0.82
VSX1-207ENST00000557285 OSBPL5Q9H0X9 879 aaPredicted RBP20.18■□□□□ 0.82
VSX1-207ENST00000557285 PICK1Q9NRD5 415 aa20.18■□□□□ 0.82
VSX1-207ENST00000557285 CDK5RAP2Q96SN8 1893 aa20.18■□□□□ 0.82
VSX1-207ENST00000557285 PHF20L1A8MW92 1017 aa20.17■□□□□ 0.82
VSX1-207ENST00000557285 DYNLL1P63167 89 aaKnown RBP20.17■□□□□ 0.82
VSX1-207ENST00000557285 PPATQ06203 517 aa20.17■□□□□ 0.82
VSX1-207ENST00000557285 MAPKAPK5Q8IW41 473 aa20.17■□□□□ 0.82
VSX1-207ENST00000557285 MIGA1Q8NAN2 632 aa20.17■□□□□ 0.82
VSX1-207ENST00000557285 DNAJC2Q99543 621 aaKnown RBP20.17■□□□□ 0.82
VSX1-207ENST00000557285 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.17■□□□□ 0.82
VSX1-207ENST00000557285 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
VSX1-207ENST00000557285 PLCG2P16885 1265 aa20.16■□□□□ 0.82
VSX1-207ENST00000557285 SLC4A8Q2Y0W8 1093 aa20.16■□□□□ 0.82
VSX1-207ENST00000557285 NOL9Q5SY16 702 aaKnown RBP20.16■□□□□ 0.82
VSX1-207ENST00000557285 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.16■□□□□ 0.82
VSX1-207ENST00000557285 DOCK1Q14185 1865 aa20.16■□□□□ 0.82
VSX1-207ENST00000557285 BTBD19C9JJ37 291 aa20.15■□□□□ 0.82
VSX1-207ENST00000557285 MAP4K4O95819 1239 aaPredicted RBP20.15■□□□□ 0.82
VSX1-207ENST00000557285 MAP3K12Q12852 859 aa20.15■□□□□ 0.82
VSX1-207ENST00000557285 NOM1Q5C9Z4 860 aaKnown RBP20.15■□□□□ 0.82
VSX1-207ENST00000557285 SCYL3Q8IZE3 742 aa20.15■□□□□ 0.82
VSX1-207ENST00000557285 CD99L2Q8TCZ2 262 aa20.15■□□□□ 0.82
VSX1-207ENST00000557285 SAP30BPQ9UHR5 308 aaKnown RBP20.15■□□□□ 0.82
VSX1-207ENST00000557285 FOCADQ5VW36 1801 aa20.14■□□□□ 0.81
VSX1-207ENST00000557285 GOLIM4O00461 696 aa20.14■□□□□ 0.81
VSX1-207ENST00000557285 RRP1P56182 461 aaKnown RBP20.14■□□□□ 0.81
VSX1-207ENST00000557285 CCDC84Q86UT8 332 aaPredicted RBP20.14■□□□□ 0.81
VSX1-207ENST00000557285 EDC3Q96F86 508 aaKnown RBP20.14■□□□□ 0.81
VSX1-207ENST00000557285 ZFYVE28Q9HCC9 887 aa20.14■□□□□ 0.81
VSX1-207ENST00000557285 ZHX2Q9Y6X8 837 aa20.14■□□□□ 0.81
VSX1-207ENST00000557285 FLT1P17948 1338 aa20.13■□□□□ 0.81
VSX1-207ENST00000557285 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
VSX1-207ENST00000557285 ECM2O94769 699 aaPredicted RBP20.13■□□□□ 0.81
VSX1-207ENST00000557285 PTPRAP18433 802 aa20.13■□□□□ 0.81
VSX1-207ENST00000557285 PPP4CP60510 307 aa20.13■□□□□ 0.81
VSX1-207ENST00000557285 LRRCC1Q9C099 1032 aa20.13■□□□□ 0.81
VSX1-207ENST00000557285 BOLA2Q9H3K6 86 aa20.13■□□□□ 0.81
VSX1-207ENST00000557285 TRIM17Q9Y577 477 aa20.13■□□□□ 0.81
VSX1-207ENST00000557285 ATAD5Q96QE3 1844 aa20.12■□□□□ 0.81
VSX1-207ENST00000557285 PALD1Q9ULE6 856 aa20.12■□□□□ 0.81
VSX1-207ENST00000557285 SIPA1L1O43166 1804 aa20.11■□□□□ 0.81
VSX1-207ENST00000557285 TRIM75PA6NK02 468 aa20.11■□□□□ 0.81
VSX1-207ENST00000557285 CTNND1O60716 968 aaKnown RBP20.11■□□□□ 0.81
VSX1-207ENST00000557285 USP5P45974 858 aa20.11■□□□□ 0.81
VSX1-207ENST00000557285 SP3Q02447 781 aa20.11■□□□□ 0.81
VSX1-207ENST00000557285 MAP3K10Q02779 954 aa20.11■□□□□ 0.81
VSX1-207ENST00000557285 TTF1Q15361 905 aaPredicted RBP20.11■□□□□ 0.81
VSX1-207ENST00000557285 ERO1AQ96HE7 468 aa20.11■□□□□ 0.81
VSX1-207ENST00000557285 TRIM34Q9BYJ4 488 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms