RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 SRRDQ9UH36 339 aa17.88■□□□□ 0.45
VRTN-202ENST00000557177 MGAMO43451 1857 aa17.88■□□□□ 0.45
VRTN-202ENST00000557177 A0A0G2JLL6 359 aaPredicted RBP17.87■□□□□ 0.45
VRTN-202ENST00000557177 BCRP11274 1271 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 PTPRAP18433 802 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 OSBPP22059 807 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 TFCP2Q12800 502 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 HABP4Q5JVS0 413 aaKnown RBP17.87■□□□□ 0.45
VRTN-202ENST00000557177 PRRT2Q7Z6L0 340 aaPredicted RBP17.87■□□□□ 0.45
VRTN-202ENST00000557177 SLF2Q8IX21 1173 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 XAGE2Q96GT9 111 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 PARK7Q99497 189 aaKnown RBP17.87■□□□□ 0.45
VRTN-202ENST00000557177 DDX4Q9NQI0 724 aaKnown RBP17.87■□□□□ 0.45
VRTN-202ENST00000557177 ABCF2Q9UG63 623 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 AKAP2Q9Y2D5 859 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.87■□□□□ 0.45
VRTN-202ENST00000557177 MROH7-TTC4A0A0A0MT08 1334 aa17.87■□□□□ 0.45
VRTN-202ENST00000557177 DDTLA6NHG4 134 aaPredicted RBP17.86■□□□□ 0.45
VRTN-202ENST00000557177 MYCP01106 439 aaPredicted RBP17.86■□□□□ 0.45
VRTN-202ENST00000557177 BTDP43251 543 aa17.86■□□□□ 0.45
VRTN-202ENST00000557177 MVPQ14764 893 aaKnown RBP17.86■□□□□ 0.45
VRTN-202ENST00000557177 SPTY2D1Q68D10 685 aaPredicted RBP17.86■□□□□ 0.45
VRTN-202ENST00000557177 ZNF384Q8TF68 577 aa17.86■□□□□ 0.45
VRTN-202ENST00000557177 AFG3L2Q9Y4W6 797 aa17.86■□□□□ 0.45
VRTN-202ENST00000557177 ZHX2Q9Y6X8 837 aa17.86■□□□□ 0.45
VRTN-202ENST00000557177 GPR75-ASB3A0A0A6YYF3 556 aa17.85■□□□□ 0.45
VRTN-202ENST00000557177 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
VRTN-202ENST00000557177 ECM2O94769 699 aaPredicted RBP17.85■□□□□ 0.45
VRTN-202ENST00000557177 SLURP2P0DP57 97 aa17.85■□□□□ 0.45
VRTN-202ENST00000557177 CYP2C8P10632 490 aa17.85■□□□□ 0.45
VRTN-202ENST00000557177 RHBDL3P58872 404 aa17.85■□□□□ 0.45
VRTN-202ENST00000557177 MECOMQ03112 1051 aa17.85■□□□□ 0.45
VRTN-202ENST00000557177 ZSCAN29Q8IWY8 852 aaPredicted RBP17.85■□□□□ 0.45
VRTN-202ENST00000557177 PICK1Q9NRD5 415 aa17.85■□□□□ 0.45
VRTN-202ENST00000557177 MYPNQ86TC9 1320 aa17.84■□□□□ 0.45
VRTN-202ENST00000557177 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
VRTN-202ENST00000557177 FMNL1O95466 1100 aaPredicted RBP17.84■□□□□ 0.45
VRTN-202ENST00000557177 HOXD10P28358 340 aa17.84■□□□□ 0.45
VRTN-202ENST00000557177 MTFR1Q15390 333 aa17.84■□□□□ 0.45
VRTN-202ENST00000557177 FASTKD5Q7L8L6 764 aaKnown RBP17.84■□□□□ 0.45
VRTN-202ENST00000557177 SHISA4Q96DD7 197 aa17.84■□□□□ 0.45
VRTN-202ENST00000557177 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
VRTN-202ENST00000557177 SLC45A1Q9Y2W3 748 aa17.84■□□□□ 0.45
VRTN-202ENST00000557177 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
VRTN-202ENST00000557177 TRIM27P14373 513 aa17.83■□□□□ 0.44
VRTN-202ENST00000557177 GRK4P32298 578 aa17.83■□□□□ 0.44
VRTN-202ENST00000557177 PICALMQ13492 652 aa17.83■□□□□ 0.44
VRTN-202ENST00000557177 ERICH6Q7L0X2 663 aa17.83■□□□□ 0.44
VRTN-202ENST00000557177 RAET1EQ8TD07 263 aa17.83■□□□□ 0.44
VRTN-202ENST00000557177 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
VRTN-202ENST00000557177 TBC1D12O60347 775 aa17.82■□□□□ 0.44
VRTN-202ENST00000557177 ARID4AP29374 1257 aaPredicted RBP17.82■□□□□ 0.44
VRTN-202ENST00000557177 PRKCZQ05513 592 aa17.82■□□□□ 0.44
VRTN-202ENST00000557177 PI16Q6UXB8 463 aa17.82■□□□□ 0.44
VRTN-202ENST00000557177 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
VRTN-202ENST00000557177 NSUN4Q96CB9 384 aaKnown RBP17.82■□□□□ 0.44
VRTN-202ENST00000557177 CEP290O15078 2479 aa17.81■□□□□ 0.44
VRTN-202ENST00000557177 GNAI2P04899 355 aa17.81■□□□□ 0.44
VRTN-202ENST00000557177 FCGRTP55899 365 aa17.81■□□□□ 0.44
VRTN-202ENST00000557177 ATF7IPQ6VMQ6 1270 aa17.81■□□□□ 0.44
VRTN-202ENST00000557177 NEUROD6Q96NK8 337 aa17.81■□□□□ 0.44
VRTN-202ENST00000557177 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.81■□□□□ 0.44
VRTN-202ENST00000557177 TNNQ9UQP3 1299 aa17.81■□□□□ 0.44
VRTN-202ENST00000557177 ATAD5Q96QE3 1844 aa17.81■□□□□ 0.44
VRTN-202ENST00000557177 LOC285556D6RIA3 1793 aa17.81■□□□□ 0.44
VRTN-202ENST00000557177 RANBP2P49792 3224 aaKnown RBP17.81■□□□□ 0.44
VRTN-202ENST00000557177 PNMA6EA0A0J9YXQ4 647 aa17.8■□□□□ 0.44
VRTN-202ENST00000557177 IPO8O15397 1037 aaKnown RBP17.8■□□□□ 0.44
VRTN-202ENST00000557177 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
VRTN-202ENST00000557177 GADL1Q6ZQY3 521 aa17.8■□□□□ 0.44
VRTN-202ENST00000557177 TBC1D9Q6ZT07 1266 aa17.8■□□□□ 0.44
VRTN-202ENST00000557177 MAST2Q6P0Q8 1798 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 SZT2Q5T011 3432 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 TRIM75PA6NK02 468 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 BCAR3O75815 825 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 CCL5P13501 91 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 MCAMP43121 646 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 GJA8P48165 433 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 GSTO1P78417 241 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 UBE2Q1Q7Z7E8 422 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 SLAIN1Q8ND83 568 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 NKX2-3Q8TAU0 364 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 GABRQQ9UN88 632 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 AGTPBP1Q9UPW5 1226 aa17.79■□□□□ 0.44
VRTN-202ENST00000557177 SIPA1L1O43166 1804 aa17.78■□□□□ 0.44
VRTN-202ENST00000557177 FAM196BA6NMK8 535 aa17.78■□□□□ 0.44
VRTN-202ENST00000557177 LDHCP07864 332 aa17.78■□□□□ 0.44
VRTN-202ENST00000557177 GJB1P08034 283 aa17.78■□□□□ 0.44
VRTN-202ENST00000557177 FXR1P51114 621 aaKnown RBP eCLIP17.78■□□□□ 0.44
VRTN-202ENST00000557177 GORABQ5T7V8 394 aa17.78■□□□□ 0.44
VRTN-202ENST00000557177 CCDC84Q86UT8 332 aaPredicted RBP17.78■□□□□ 0.44
VRTN-202ENST00000557177 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
VRTN-202ENST00000557177 COLQQ9Y215 455 aaPredicted RBP17.78■□□□□ 0.44
VRTN-202ENST00000557177 H0YGN5 161 aa17.77■□□□□ 0.44
VRTN-202ENST00000557177 UBXN2AP68543 259 aa17.77■□□□□ 0.44
VRTN-202ENST00000557177 G3BP1Q13283 466 aaKnown RBP eCLIP17.77■□□□□ 0.44
VRTN-202ENST00000557177 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
VRTN-202ENST00000557177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.77■□□□□ 0.44
VRTN-202ENST00000557177 RAI14Q9P0K7 980 aa17.77■□□□□ 0.44
VRTN-202ENST00000557177 FOCADQ5VW36 1801 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms