RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 HERVK_113Q902F9 699 aa15.93■□□□□ 0.14
ABCD4-226ENST00000556971 DCAF15Q66K64 600 aa15.92■□□□□ 0.14
ABCD4-226ENST00000556971 DZIP1LQ8IYY4 767 aaKnown RBP15.92■□□□□ 0.14
ABCD4-226ENST00000556971 PRSS33Q8NF86 280 aa15.92■□□□□ 0.14
ABCD4-226ENST00000556971 ZNF341Q9BYN7 854 aa15.92■□□□□ 0.14
ABCD4-226ENST00000556971 LEMD3Q9Y2U8 911 aa15.92■□□□□ 0.14
ABCD4-226ENST00000556971 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
ABCD4-226ENST00000556971 A0A0G2JMZ2 1700 aa15.91■□□□□ 0.14
ABCD4-226ENST00000556971 RPAP1Q9BWH6 1393 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-226ENST00000556971 CXCL11O14625 94 aa15.91■□□□□ 0.14
ABCD4-226ENST00000556971 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
ABCD4-226ENST00000556971 ZKSCAN1P17029 563 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-226ENST00000556971 FASTKD5Q7L8L6 764 aaKnown RBP15.91■□□□□ 0.14
ABCD4-226ENST00000556971 CDC5LQ99459 802 aaKnown RBP15.91■□□□□ 0.14
ABCD4-226ENST00000556971 DAGLAQ9Y4D2 1042 aa15.91■□□□□ 0.14
ABCD4-226ENST00000556971 PTPRFP10586 1907 aa15.91■□□□□ 0.14
ABCD4-226ENST00000556971 A0A0G2JLL6 359 aaPredicted RBP15.9■□□□□ 0.14
ABCD4-226ENST00000556971 DNM1LO00429 736 aa15.9■□□□□ 0.14
ABCD4-226ENST00000556971 RGS20O76081 388 aa15.9■□□□□ 0.14
ABCD4-226ENST00000556971 FPGSQ05932 587 aa15.9■□□□□ 0.14
ABCD4-226ENST00000556971 SLC39A5Q6ZMH5 540 aa15.9■□□□□ 0.14
ABCD4-226ENST00000556971 PRRT2Q7Z6L0 340 aaPredicted RBP15.9■□□□□ 0.14
ABCD4-226ENST00000556971 NKX2-4Q9H2Z4 354 aa15.9■□□□□ 0.14
ABCD4-226ENST00000556971 COG5Q9UP83 839 aa15.9■□□□□ 0.14
ABCD4-226ENST00000556971 SLC45A1Q9Y2W3 748 aa15.9■□□□□ 0.14
ABCD4-226ENST00000556971 RIF1Q5UIP0 2472 aaKnown RBP15.9■□□□□ 0.14
ABCD4-226ENST00000556971 GBF1Q92538 1859 aa15.89■□□□□ 0.13
ABCD4-226ENST00000556971 CACNA1HO95180 2353 aa15.89■□□□□ 0.13
ABCD4-226ENST00000556971 FKBP1AP62942 108 aaKnown RBP15.89■□□□□ 0.13
ABCD4-226ENST00000556971 PLBD2Q8NHP8 589 aa15.89■□□□□ 0.13
ABCD4-226ENST00000556971 JARID2Q92833 1246 aaPredicted RBP15.89■□□□□ 0.13
ABCD4-226ENST00000556971 FAM186AA6NE01 2351 aa15.89■□□□□ 0.13
ABCD4-226ENST00000556971 NCOR2Q9Y618 2525 aa15.88■□□□□ 0.13
ABCD4-226ENST00000556971 PDE8AO60658 829 aa15.88■□□□□ 0.13
ABCD4-226ENST00000556971 ALADP13716 330 aa15.88■□□□□ 0.13
ABCD4-226ENST00000556971 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
ABCD4-226ENST00000556971 HFE2Q6ZVN8 426 aa15.88■□□□□ 0.13
ABCD4-226ENST00000556971 HOOK2Q96ED9 719 aa15.88■□□□□ 0.13
ABCD4-226ENST00000556971 SERPINA10Q9UK55 444 aa15.88■□□□□ 0.13
ABCD4-226ENST00000556971 TTF2Q9UNY4 1162 aaKnown RBP15.88■□□□□ 0.13
ABCD4-226ENST00000556971 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
ABCD4-226ENST00000556971 KCNJ4P48050 445 aa15.87■□□□□ 0.13
ABCD4-226ENST00000556971 PTPN5P54829 565 aa15.87■□□□□ 0.13
ABCD4-226ENST00000556971 COL9A2Q14055 689 aaPredicted RBP15.87■□□□□ 0.13
ABCD4-226ENST00000556971 CCL14Q16627 93 aa15.87■□□□□ 0.13
ABCD4-226ENST00000556971 GJD3Q8N144 294 aa15.87■□□□□ 0.13
ABCD4-226ENST00000556971 FAM86C1Q9NVL1 165 aa15.87■□□□□ 0.13
ABCD4-226ENST00000556971 SSTR3P32745 418 aaPredicted RBP15.86■□□□□ 0.13
ABCD4-226ENST00000556971 SNX17Q15036 470 aa15.86■□□□□ 0.13
ABCD4-226ENST00000556971 NOL9Q5SY16 702 aaKnown RBP15.86■□□□□ 0.13
ABCD4-226ENST00000556971 GJC2Q5T442 439 aaPredicted RBP15.86■□□□□ 0.13
ABCD4-226ENST00000556971 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.86■□□□□ 0.134e-7■□□□□ 11.2
ABCD4-226ENST00000556971 MSRAQ9UJ68 235 aa15.86■□□□□ 0.13
ABCD4-226ENST00000556971 CFAP47Q6ZTR5 3102 aa15.85■□□□□ 0.13
ABCD4-226ENST00000556971 RAG1P15918 1043 aa15.85■□□□□ 0.13
ABCD4-226ENST00000556971 CRKP46108 304 aa15.85■□□□□ 0.13
ABCD4-226ENST00000556971 RAB30Q15771 203 aa15.85■□□□□ 0.13
ABCD4-226ENST00000556971 HLA-CQ95604 372 aa15.85■□□□□ 0.13
ABCD4-226ENST00000556971 DLG5Q8TDM6 1919 aa15.85■□□□□ 0.13
ABCD4-226ENST00000556971 CHD6Q8TD26 2715 aa15.85■□□□□ 0.13
ABCD4-226ENST00000556971 MED19A0JLT2 244 aaPredicted RBP15.84■□□□□ 0.13
ABCD4-226ENST00000556971 SNAP23O00161 211 aa15.84■□□□□ 0.13
ABCD4-226ENST00000556971 XRCC5P13010 732 aaKnown RBP15.84■□□□□ 0.13
ABCD4-226ENST00000556971 ID4P47928 161 aa15.84■□□□□ 0.13
ABCD4-226ENST00000556971 EIF4G2P78344 907 aaKnown RBP eCLIP15.84■□□□□ 0.13
ABCD4-226ENST00000556971 LPAR1Q92633 364 aa15.84■□□□□ 0.13
ABCD4-226ENST00000556971 NUDT12Q9BQG2 462 aa15.84■□□□□ 0.13
ABCD4-226ENST00000556971 SLC28A3Q9HAS3 691 aa15.84■□□□□ 0.13
ABCD4-226ENST00000556971 DDX20Q9UHI6 824 aaKnown RBP15.84■□□□□ 0.13
ABCD4-226ENST00000556971 ZNF112Q9UJU3 913 aa15.84■□□□□ 0.13
ABCD4-226ENST00000556971 ZHX2Q9Y6X8 837 aa15.84■□□□□ 0.13
ABCD4-226ENST00000556971 ACACBO00763 2458 aa15.84■□□□□ 0.13
ABCD4-226ENST00000556971 TLE2Q04725 743 aa15.83■□□□□ 0.12
ABCD4-226ENST00000556971 TRMT44Q8IYL2 757 aaKnown RBP15.83■□□□□ 0.12
ABCD4-226ENST00000556971 SOCS4Q8WXH5 440 aa15.83■□□□□ 0.12
ABCD4-226ENST00000556971 AGTPBP1Q9UPW5 1226 aa15.83■□□□□ 0.12
ABCD4-226ENST00000556971 YBX2Q9Y2T7 364 aaKnown RBP15.83■□□□□ 0.12
ABCD4-226ENST00000556971 DCXO43602 365 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 CLTBP09497 229 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 IL1R1P14778 569 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 CTSWP56202 376 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 TRIM28Q13263 835 aaKnown RBP15.82■□□□□ 0.12
ABCD4-226ENST00000556971 MFSD14BQ5SR56 506 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 TREML2Q5T2D2 321 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 KRT40Q6A162 431 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 CNTNAP3BQ96NU0 1288 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 CNTNAP3Q9BZ76 1288 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 GREM2Q9H772 168 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 PNMA3Q9UL41 463 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 TACC3Q9Y6A5 838 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 MTCH2Q9Y6C9 303 aa15.82■□□□□ 0.12
ABCD4-226ENST00000556971 TRANK1O15050 2925 aa15.81■□□□□ 0.12
ABCD4-226ENST00000556971 FAM83AQ86UY5 434 aa15.81■□□□□ 0.12
ABCD4-226ENST00000556971 MFSD14AQ96MC6 490 aa15.81■□□□□ 0.12
ABCD4-226ENST00000556971 MYH3P11055 1940 aa15.8■□□□□ 0.12
ABCD4-226ENST00000556971 MYBBP1AQ9BQG0 1328 aaKnown RBP15.8■□□□□ 0.12
ABCD4-226ENST00000556971 KBTBD13C9JR72 458 aa15.8■□□□□ 0.12
ABCD4-226ENST00000556971 KIAA0355O15063 1070 aa15.8■□□□□ 0.12
ABCD4-226ENST00000556971 GTPBP6O43824 516 aaPredicted RBP15.8■□□□□ 0.12
ABCD4-226ENST00000556971 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms