RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 UQCRFS1P1P0C7P4 283 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 ADORA1P30542 326 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 CACNB3P54284 484 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 GSTO1P78417 241 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 GOLGA6L2Q8N9W4 650 aaPredicted RBP9□□□□□ -0.97
SCFD1-222ENST00000556768 ABHD8Q96I13 439 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 USP40Q9NVE5 1235 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 TNNQ9UQP3 1299 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 SPEF2Q9C093 1822 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 PDS5AQ29RF7 1337 aaKnown RBP8.99□□□□□ -0.97
SCFD1-222ENST00000556768 CCDC85CA6NKD9 419 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 TBC1D8O95759 1140 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 LDHCP07864 332 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 RASGRF1Q13972 1273 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 DIXDC1Q155Q3 683 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 HSP90AB4PQ58FF6 505 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 SPATA5Q8NB90 893 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 SSH3Q8TE77 659 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 FAM151AQ8WW52 585 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 CLMNQ96JQ2 1002 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 NOL10Q9BSC4 688 aaKnown RBP8.99□□□□□ -0.97
SCFD1-222ENST00000556768 GOPCQ9HD26 462 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 GPR108Q9NPR9 543 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 LRP2BPQ9P2M1 347 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 DAGLAQ9Y4D2 1042 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 AOX1Q06278 1338 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 PAPPA2Q9BXP8 1791 aa8.99□□□□□ -0.97
SCFD1-222ENST00000556768 GTF2A2P52657 109 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 TCP10Q12799 353 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 TTC39AQ5SRH9 613 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 CDC42EP5Q6NZY7 148 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 ERC1Q8IUD2 1116 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 ZSCAN29Q8IWY8 852 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-222ENST00000556768 OPTNQ96CV9 577 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 WNK4Q96J92 1243 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 TEPSINQ96N21 525 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 WRNIP1Q96S55 665 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 MCOLN1Q9GZU1 580 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 ELP3Q9H9T3 547 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 PLSCR2Q9NRY7 297 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 RAI14Q9P0K7 980 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 HMMRO75330 724 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 PKN2Q16513 984 aaKnown RBP8.98□□□□□ -0.97
SCFD1-222ENST00000556768 NOM1Q5C9Z4 860 aaKnown RBP8.98□□□□□ -0.97
SCFD1-222ENST00000556768 FAM163AQ96GL9 167 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-222ENST00000556768 PHF12Q96QT6 1004 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 ZNF341Q9BYN7 854 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 RCAN3Q9UKA8 241 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 DDX19BQ9UMR2 479 aa8.98□□□□□ -0.97
SCFD1-222ENST00000556768 GPR25O00155 361 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 BAG3O95817 575 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 MAP4K4O95819 1239 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-222ENST00000556768 RLBP1P12271 317 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 FOXK1P85037 733 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 VGLL4Q14135 290 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 ARHGEF6Q15052 776 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 TNNI3KQ59H18 835 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 MIGA2Q7L4E1 593 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 CTU1Q7Z7A3 348 aaKnown RBP8.97□□□□□ -0.97
SCFD1-222ENST00000556768 ERO1BQ86YB8 467 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.97□□□□□ -0.97
SCFD1-222ENST00000556768 PANK1Q8TE04 598 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 ZNF296Q8WUU4 475 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-222ENST00000556768 HMG20BQ9P0W2 317 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 TRPC6Q9Y210 931 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 FPGT-TNNI3KV9GXZ4 949 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 PSME4Q14997 1843 aa8.97□□□□□ -0.97
SCFD1-222ENST00000556768 FKTNO75072 461 aa8.96□□□□□ -0.97
SCFD1-222ENST00000556768 ENTPD3O75355 529 aa8.96□□□□□ -0.97
SCFD1-222ENST00000556768 ARID4AP29374 1257 aaPredicted RBP8.96□□□□□ -0.97
SCFD1-222ENST00000556768 MECOMQ03112 1051 aa8.96□□□□□ -0.97
SCFD1-222ENST00000556768 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.96□□□□□ -0.97
SCFD1-222ENST00000556768 OTUD5Q96G74 571 aa8.96□□□□□ -0.97
SCFD1-222ENST00000556768 CFHR5Q9BXR6 569 aa8.96□□□□□ -0.97
SCFD1-222ENST00000556768 NOP58Q9Y2X3 529 aaKnown RBP8.96□□□□□ -0.97
SCFD1-222ENST00000556768 POLR2AP24928 1970 aaKnown RBP8.96□□□□□ -0.98
SCFD1-222ENST00000556768 IGSF3O75054 1194 aa8.96□□□□□ -0.98
SCFD1-222ENST00000556768 CETPP11597 493 aa8.96□□□□□ -0.98
SCFD1-222ENST00000556768 BTDP43251 543 aa8.96□□□□□ -0.98
SCFD1-222ENST00000556768 SNAPC2Q13487 334 aa8.96□□□□□ -0.98
SCFD1-222ENST00000556768 CDAN1Q8IWY9 1227 aa8.96□□□□□ -0.98
SCFD1-222ENST00000556768 RPAP2Q8IXW5 612 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-222ENST00000556768 ZKSCAN4Q969J2 545 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-222ENST00000556768 IDI2Q9BXS1 227 aa8.96□□□□□ -0.98
SCFD1-222ENST00000556768 THSD7BQ9C0I4 1608 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 CCL15-CCL14A0A0B4J2E2 113 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 SPDYE5A6NIY4 337 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 PLCG2P16885 1265 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 RGS3P49796 1198 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 PPATQ06203 517 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 NFIAQ12857 509 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 PICALMQ13492 652 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 CCL15Q16663 113 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 CEP85Q6P2H3 762 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 TBC1D9Q6ZT07 1266 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 ZNF512BQ96KM6 892 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-222ENST00000556768 ZFYVE28Q9HCC9 887 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 PICK1Q9NRD5 415 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 COG6Q9Y2V7 657 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 MROH7-TTC4A0A0A0MT08 1334 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms