RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ITPKAP23677 461 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 RXRBP28702 533 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 SOX4Q06945 474 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-243ENST00000556671 PDE4CQ08493 712 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 C2CD4AQ8NCU7 369 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-243ENST00000556671 MFSD14AQ96MC6 490 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 DNAJC25Q9H1X3 360 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 EHD4Q9H223 541 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 ZNF576Q9H609 170 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 ZFYVE16Q7Z3T8 1539 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 SYCP2Q9BX26 1530 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 TRAPPC8Q9Y2L5 1435 aa7.09□□□□□ -1.28
ATXN3-243ENST00000556671 FER1L4A9Z1Z3 1794 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 KIDINS220Q9ULH0 1771 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 ARHGEF12Q9NZN5 1544 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 WDR64B1ANS9 1081 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 B3GALT4O96024 378 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 MAOBP27338 520 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 POU4F3Q15319 338 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 CDPF1Q6NVV7 123 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 DTX1Q86Y01 620 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 CCER1Q8TC90 406 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-243ENST00000556671 TRIM56Q9BRZ2 755 aaKnown RBP7.08□□□□□ -1.28
ATXN3-243ENST00000556671 ZNF518AQ6AHZ1 1483 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 RIMS1Q86UR5 1692 aaKnown RBP7.08□□□□□ -1.28
ATXN3-243ENST00000556671 YEATS2Q9ULM3 1422 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 HECW2Q9P2P5 1572 aa7.08□□□□□ -1.28
ATXN3-243ENST00000556671 ABCC1P33527 1531 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 MAP3K1Q13233 1512 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 ATP10AO60312 1499 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 PLEKHH2Q8IVE3 1493 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 FAM95CA0A1B0GW59 222 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-243ENST00000556671 EIF1AYO14602 144 aaKnown RBP7.07□□□□□ -1.28
ATXN3-243ENST00000556671 F13BP05160 661 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 ADH5P11766 374 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 USP11P51784 963 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 PTPN12Q05209 780 aaKnown RBP7.07□□□□□ -1.28
ATXN3-243ENST00000556671 HP1BP3Q5SSJ5 553 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-243ENST00000556671 PRPF40BQ6NWY9 871 aaKnown RBP7.07□□□□□ -1.28
ATXN3-243ENST00000556671 EZH1Q92800 747 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-243ENST00000556671 CCDC74AQ96AQ1 378 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 ALKBH8Q96BT7 664 aaKnown RBP7.07□□□□□ -1.28
ATXN3-243ENST00000556671 NIF3L1Q9GZT8 377 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 ABCB6Q9NP58 842 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 POGZQ7Z3K3 1410 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 BCORL1Q5H9F3 1711 aa7.07□□□□□ -1.28
ATXN3-243ENST00000556671 ADGBQ8N7X0 1667 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 CAMSAP2Q08AD1 1489 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 PTPN23Q9H3S7 1636 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 ADAMTS4O75173 837 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 NFKBIBQ15653 356 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 GGT6Q6P531 493 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 PAOXQ6QHF9 649 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 GIMAP7Q8NHV1 300 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 DDX54Q8TDD1 881 aaKnown RBP7.06□□□□□ -1.28
ATXN3-243ENST00000556671 FBLIM1Q8WUP2 373 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 DMRTB1Q96MA1 342 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 RBCK1Q9BYM8 510 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 ZFYVE1Q9HBF4 777 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 PIM2Q9P1W9 311 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 SIGLEC1Q9BZZ2 1709 aa7.06□□□□□ -1.28
ATXN3-243ENST00000556671 ABCA6Q8N139 1617 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 SOWAHDA6NJG2 315 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 ECEL1O95672 775 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 HOXA10P31260 410 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-243ENST00000556671 GP2P55259 537 aaKnown RBP7.05□□□□□ -1.28
ATXN3-243ENST00000556671 CPSF6Q16630 551 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATXN3-243ENST00000556671 MCTP1Q6DN14 999 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 TMC1Q8TDI8 760 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 CSRNP1Q96S65 589 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 CORO1BQ9BR76 489 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 YIPF2Q9BWQ6 316 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 ATG3Q9NT62 314 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 ACTL7BQ9Y614 415 aa7.05□□□□□ -1.28
ATXN3-243ENST00000556671 MAGI2Q86UL8 1455 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 SETD1BQ9UPS6 1966 aaKnown RBP7.04□□□□□ -1.28
ATXN3-243ENST00000556671 MYOM3Q5VTT5 1437 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 CEBPAP49715 358 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-243ENST00000556671 RPS26P11Q5JNZ5 115 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-243ENST00000556671 SHISA5Q8N114 240 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 FBXL6Q8N531 539 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 GLIS3Q8NEA6 775 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 RRP7BPQ9NSQ0 103 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 PRKAG2Q9UGJ0 569 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 OAS3Q9Y6K5 1087 aaKnown RBP7.04□□□□□ -1.28
ATXN3-243ENST00000556671 ATP7AQ04656 1500 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 ZMYM4Q5VZL5 1548 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 ARHGEF40Q8TER5 1519 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 MADDQ8WXG6 1647 aa7.04□□□□□ -1.28
ATXN3-243ENST00000556671 DIP2CQ9Y2E4 1556 aa7.03□□□□□ -1.28
ATXN3-243ENST00000556671 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
ATXN3-243ENST00000556671 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
ATXN3-243ENST00000556671 KIF3BO15066 747 aa7.03□□□□□ -1.28
ATXN3-243ENST00000556671 GADD45BO75293 160 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-243ENST00000556671 OSBPL1AQ9BXW6 950 aa7.03□□□□□ -1.28
ATXN3-243ENST00000556671 GSX1Q9H4S2 264 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-243ENST00000556671 TRAK1Q9UPV9 953 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms