RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 C11orf16Q9NQ32 467 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 TERF2IPQ9NYB0 399 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 MARK1Q9P0L2 795 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 QRICH2Q9H0J4 1663 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 ATP7BP35670 1465 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 ZBTB7CA1YPR0 619 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 TGFBR3LH3BV60 316 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 PRMT3O60678 531 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 ALAS2P22557 587 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 EVA1CP58658 441 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 TYRO3Q06418 890 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 ADGRE1Q14246 886 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 MBTPS1Q14703 1052 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.71□□□□□ -1.18
CPSF2-205ENST00000556622 PRDM11Q9NQV5 511 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 LRFN2Q9ULH4 789 aa7.71□□□□□ -1.18
CPSF2-205ENST00000556622 APAF1O14727 1248 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 IPO8O15397 1037 aaKnown RBP7.7□□□□□ -1.18
CPSF2-205ENST00000556622 GCP02774 474 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 NID1P14543 1247 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 SELPP16109 830 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 SSFA2P28290 1259 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 DEKP35659 375 aaKnown RBP7.7□□□□□ -1.18
CPSF2-205ENST00000556622 CHRNA2Q15822 529 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 BTLAQ7Z6A9 289 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 HSH2DQ96JZ2 352 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 BTG4Q9NY30 223 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 KDM2BQ8NHM5 1336 aa7.7□□□□□ -1.18
CPSF2-205ENST00000556622 ITSN1Q15811 1721 aa7.69□□□□□ -1.18
CPSF2-205ENST00000556622 COX20Q5RI15 118 aa7.69□□□□□ -1.18
CPSF2-205ENST00000556622 MICALL1Q8N3F8 863 aa7.69□□□□□ -1.18
CPSF2-205ENST00000556622 EFCC1Q9HA90 598 aa7.69□□□□□ -1.18
CPSF2-205ENST00000556622 USTQ9Y2C2 406 aa7.69□□□□□ -1.18
CPSF2-205ENST00000556622 COL22A1Q8NFW1 1626 aaPredicted RBP7.69□□□□□ -1.18
CPSF2-205ENST00000556622 IL16Q14005 1332 aa7.69□□□□□ -1.18
CPSF2-205ENST00000556622 TTC21BQ7Z4L5 1316 aa7.69□□□□□ -1.18
CPSF2-205ENST00000556622 ANKRD36BQ8N2N9 1353 aa7.69□□□□□ -1.18
CPSF2-205ENST00000556622 ATP2B4P23634 1241 aa7.68□□□□□ -1.18
CPSF2-205ENST00000556622 INPP5BP32019 993 aa7.68□□□□□ -1.18
CPSF2-205ENST00000556622 SFSWAPQ12872 951 aaKnown RBP7.68□□□□□ -1.18
CPSF2-205ENST00000556622 VPS72Q15906 364 aa7.68□□□□□ -1.18
CPSF2-205ENST00000556622 VTI1AQ96AJ9 217 aa7.68□□□□□ -1.18
CPSF2-205ENST00000556622 BRD7Q9NPI1 651 aa7.68□□□□□ -1.18
CPSF2-205ENST00000556622 PRDM6Q9NQX0 595 aa7.68□□□□□ -1.18
CPSF2-205ENST00000556622 ADARB2-AS1A8MUL3 147 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 C16orf46Q6P387 395 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 SHISA2Q6UWI4 295 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 NPM2Q86SE8 214 aaKnown RBP7.67□□□□□ -1.18
CPSF2-205ENST00000556622 TP53INP1Q96A56 240 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 CEP63Q96MT8 703 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 BCL11AQ9H165 835 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 KLK14Q9P0G3 267 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 KCNH4Q9UQ05 1017 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 TTC21AQ8NDW8 1320 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 USP6P35125 1406 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 BCL9LQ86UU0 1499 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 MYOM1P52179 1685 aa7.67□□□□□ -1.18
CPSF2-205ENST00000556622 COBLO75128 1261 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 SIN3BO75182 1162 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 DGKZQ13574 1117 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 PHLDB3Q6NSJ2 640 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 CAPN12Q6ZSI9 719 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 TXNRD3Q86VQ6 643 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 KCNH5Q8NCM2 988 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 SAP130Q9H0E3 1048 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 KIAA0232Q92628 1395 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 NSD3Q9BZ95 1437 aa7.66□□□□□ -1.18
CPSF2-205ENST00000556622 TRPM3Q9HCF6 1732 aaPredicted RBP7.66□□□□□ -1.18
CPSF2-205ENST00000556622 C9orf172C9J069 976 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 OPLAHO14841 1288 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 PLIN1O60240 522 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 ATRNO75882 1429 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 MICAL2O94851 1124 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 PTMSP20962 102 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 GRNP28799 593 aaKnown RBP7.65□□□□□ -1.18
CPSF2-205ENST00000556622 LMOD3Q0VAK6 560 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 CPSF1Q10570 1443 aaKnown RBP7.65□□□□□ -1.18
CPSF2-205ENST00000556622 ZKSCAN2Q63HK3 967 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 NME9Q86XW9 330 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 FTSJ3Q8IY81 847 aaKnown RBP7.65□□□□□ -1.18
CPSF2-205ENST00000556622 TCP11L2Q8N4U5 519 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 IFT43Q96FT9 208 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 ALS2Q96Q42 1657 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 SLC30A3Q99726 388 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 DDX19BQ9UMR2 479 aa7.65□□□□□ -1.18
CPSF2-205ENST00000556622 MARF1Q9Y4F3 1742 aaKnown RBP7.65□□□□□ -1.18
CPSF2-205ENST00000556622 TOPAZ1Q8N9V7 1692 aa7.64□□□□□ -1.19
CPSF2-205ENST00000556622 SLIT2O94813 1529 aa7.64□□□□□ -1.19
CPSF2-205ENST00000556622 KIF16BQ96L93 1317 aa7.64□□□□□ -1.19
CPSF2-205ENST00000556622 TNFRSF10BO14763 440 aa7.64□□□□□ -1.19
CPSF2-205ENST00000556622 NRG1Q02297 640 aaPredicted RBP7.64□□□□□ -1.19
CPSF2-205ENST00000556622 TNFRSF25Q93038 417 aa7.64□□□□□ -1.19
CPSF2-205ENST00000556622 GSX2Q9BZM3 304 aa7.64□□□□□ -1.19
CPSF2-205ENST00000556622 SSH2Q76I76 1423 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 USP19O94966 1318 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 SPATA31A5Q5VU36 1347 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 SPATA31A7Q8IWB4 1347 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 EGFRP00533 1210 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 U2AF1L5P0DN76 240 aaPredicted RBP7.63□□□□□ -1.19
CPSF2-205ENST00000556622 ELNP15502 786 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms