RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CDC27P30260 824 aa21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 ZNF445P59923 1031 aa21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 CTR9Q6PD62 1173 aa21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 PARP3Q9Y6F1 533 aa21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 RIMBP2O15034 1052 aa21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 ZBTB43O43298 467 aa21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 CEBPZQ03701 1054 aaKnown RBP21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 CRNKL1Q9BZJ0 848 aaKnown RBP21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 RNF41Q9H4P4 317 aaPredicted RBP21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 CCDC69A6NI79 296 aa21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 SRGNP10124 158 aa21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 CSPP1Q1MSJ5 1256 aa21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 CHMP4CQ96CF2 233 aa21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 SLC12A7Q9Y666 1083 aa21.43■■□□□ 1.02
SDR39U1-220ENST00000556548 CYP2D6P10635 497 aa21.42■■□□□ 1.02
SDR39U1-220ENST00000556548 EN1Q05925 392 aaPredicted RBP21.42■■□□□ 1.02
SDR39U1-220ENST00000556548 EZH2Q15910 746 aaKnown RBP21.42■■□□□ 1.02
SDR39U1-220ENST00000556548 PHKBQ93100 1093 aa21.42■■□□□ 1.02
SDR39U1-220ENST00000556548 DCP1AQ9NPI6 582 aaPredicted RBP21.42■■□□□ 1.02
SDR39U1-220ENST00000556548 GOLGA8AA7E2F4 631 aa21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 FLAD1Q8NFF5 587 aa21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 WTAPQ15007 396 aa21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 C15orf52Q6ZUT6 534 aaKnown RBP21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 SGMS1Q86VZ5 419 aa21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 SPATA32Q96LK8 384 aa21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 ZSCAN16Q9H4T2 348 aaPredicted RBP21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 ANAPC4Q9UJX5 808 aa21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 BAZ2AQ9UIF9 1905 aaKnown RBP21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 TIAM2Q8IVF5 1701 aa21.41■■□□□ 1.02
SDR39U1-220ENST00000556548 RANBP6O60518 1105 aaKnown RBP21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 LIFRP42702 1097 aa21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 C8orf76Q96K31 380 aa21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 AIFM3Q96NN9 605 aa21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 FTOQ9C0B1 505 aaKnown RBP eCLIP21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 CHD4Q14839 1912 aa21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 ERICH2A1L162 156 aa21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 SART3Q15020 963 aaKnown RBP21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 SP8Q8IXZ3 490 aa21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 UBAC1Q9BSL1 405 aa21.4■■□□□ 1.02
SDR39U1-220ENST00000556548 SH3RF3Q8TEJ3 882 aaPredicted RBP21.39■■□□□ 1.02
SDR39U1-220ENST00000556548 LEO1Q8WVC0 666 aaPredicted RBP21.39■■□□□ 1.02
SDR39U1-220ENST00000556548 ESR2Q92731 530 aa21.39■■□□□ 1.02
SDR39U1-220ENST00000556548 ISY1Q9ULR0 285 aaKnown RBP21.39■■□□□ 1.02
SDR39U1-220ENST00000556548 ATP6V0A2Q9Y487 856 aa21.39■■□□□ 1.02
SDR39U1-220ENST00000556548 NPR1P16066 1061 aa21.39■■□□□ 1.01
SDR39U1-220ENST00000556548 ZNF622Q969S3 477 aaKnown RBP eCLIP21.39■■□□□ 1.01
SDR39U1-220ENST00000556548 SYAP1Q96A49 352 aaPredicted RBP21.39■■□□□ 1.01
SDR39U1-220ENST00000556548 FAM217BQ9NTX9 383 aaPredicted RBP21.39■■□□□ 1.01
SDR39U1-220ENST00000556548 ANKRD31Q8N7Z5 1873 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 UBE2Q2LH0YL09 131 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 USP17L8P0C7I0 530 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 IL1R1P14778 569 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 SYNE3Q6ZMZ3 975 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 FBXW7Q969H0 707 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 SCAND2PQ9GZW5 306 aaPredicted RBP21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 MCM9Q9NXL9 1143 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 USP5P45974 858 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 GIMAP6Q6P9H5 292 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 CCDC82Q8N4S0 544 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 NUP133Q8WUM0 1156 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 ATP8A2Q9NTI2 1148 aa21.38■■□□□ 1.01
SDR39U1-220ENST00000556548 TNKSO95271 1327 aa21.37■■□□□ 1.01
SDR39U1-220ENST00000556548 PDE6BP35913 854 aa21.37■■□□□ 1.01
SDR39U1-220ENST00000556548 MFSD14BQ5SR56 506 aa21.37■■□□□ 1.01
SDR39U1-220ENST00000556548 LRSAM1Q6UWE0 723 aa21.37■■□□□ 1.01
SDR39U1-220ENST00000556548 ILDR1Q86SU0 546 aaPredicted RBP21.37■■□□□ 1.01
SDR39U1-220ENST00000556548 CMTR1Q8N1G2 835 aaKnown RBP21.37■■□□□ 1.01
SDR39U1-220ENST00000556548 RBSNQ9H1K0 784 aa21.37■■□□□ 1.01
SDR39U1-220ENST00000556548 FAM47AQ5JRC9 791 aa21.36■■□□□ 1.01
SDR39U1-220ENST00000556548 ZNF219Q9P2Y4 722 aaPredicted RBP21.36■■□□□ 1.01
SDR39U1-220ENST00000556548 POLR3DP05423 398 aaPredicted RBP21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 GTF2IP78347 998 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 GSTO1P78417 241 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 NTRK3Q16288 839 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 CPLX2Q6PUV4 134 aaKnown RBP21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 MPNDQ8N594 471 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 FBXO18Q8NFZ0 1043 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 TGFBRAP1Q8WUH2 860 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 ALG1Q9BT22 464 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 GOLGA6L4A6NEF3 574 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 CDKL5O76039 1030 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 IARSP41252 1262 aaKnown RBP21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 DOK7Q18PE1 504 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 SLC26A6Q9BXS9 759 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 ELP1O95163 1332 aa21.35■■□□□ 1.01
SDR39U1-220ENST00000556548 ALDH1B1P30837 517 aa21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 SLC15A2Q16348 729 aa21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 CCDC183Q5T5S1 534 aa21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 TMC4Q7Z404 712 aa21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 ENAHQ8N8S7 591 aaPredicted RBP21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 MASTLQ96GX5 879 aa21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 USP28Q96RU2 1077 aa21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 ZSCAN10Q96SZ4 725 aaPredicted RBP21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 NOL10Q9BSC4 688 aaKnown RBP21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 ZBTB22O15209 634 aa21.34■■□□□ 1.01
SDR39U1-220ENST00000556548 NMT2O60551 498 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms