RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 SLC4A4Q9Y6R1 1079 aa13.47□□□□□ -0.25
FOXN3-212ENST00000556541 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
FOXN3-212ENST00000556541 ROBO3Q96MS0 1386 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 SIPA1L1O43166 1804 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 EGFRP00533 1210 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 PCP11498 1178 aaKnown RBP13.46□□□□□ -0.25
FOXN3-212ENST00000556541 TNNI2P48788 182 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 HIRAP54198 1017 aaPredicted RBP13.46□□□□□ -0.25
FOXN3-212ENST00000556541 NBPF9Q3BBW0 867 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 TBC1D10BQ4KMP7 808 aaPredicted RBP13.46□□□□□ -0.25
FOXN3-212ENST00000556541 CCDC129Q6ZRS4 1044 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 IFNL3Q8IZI9 196 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 FAM151AQ8WW52 585 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 KCNB2Q92953 911 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 IL17RAQ96F46 866 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 TDRD3Q9H7E2 651 aaKnown RBP13.46□□□□□ -0.25
FOXN3-212ENST00000556541 ANAPC4Q9UJX5 808 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
FOXN3-212ENST00000556541 USP5P45974 858 aa13.45□□□□□ -0.26
FOXN3-212ENST00000556541 METTL16Q86W50 562 aaKnown RBP13.45□□□□□ -0.26
FOXN3-212ENST00000556541 IL27Q8NEV9 243 aa13.45□□□□□ -0.26
FOXN3-212ENST00000556541 OSBPL5Q9H0X9 879 aaPredicted RBP13.45□□□□□ -0.26
FOXN3-212ENST00000556541 EHD4Q9H223 541 aa13.45□□□□□ -0.26
FOXN3-212ENST00000556541 EPB41L4AQ9HCS5 686 aaPredicted RBP13.45□□□□□ -0.26
FOXN3-212ENST00000556541 FAM198AQ9UFP1 575 aa13.45□□□□□ -0.26
FOXN3-212ENST00000556541 MYH8P13535 1937 aa13.45□□□□□ -0.26
FOXN3-212ENST00000556541 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
FOXN3-212ENST00000556541 FGAP02671 866 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 MAP3K10Q02779 954 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 TSGA10IPQ3SY00 556 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 VPS53Q5VIR6 699 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 LDHDQ86WU2 507 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 AMOTL1Q8IY63 956 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 HOOK2Q96ED9 719 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 USP26Q9BXU7 913 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 NAPBQ9H115 298 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 ANO2Q9NQ90 1003 aa13.44□□□□□ -0.26
FOXN3-212ENST00000556541 DDX4Q9NQI0 724 aaKnown RBP13.44□□□□□ -0.26
FOXN3-212ENST00000556541 PRKAB2O43741 272 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 TBC1D12O60347 775 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 FGRP09769 529 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 PTH1RQ03431 593 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 NFIAQ12857 509 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 C12orf60Q5U649 245 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 TTC6Q86TZ1 520 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 GGA3Q9NZ52 723 aa13.43□□□□□ -0.26
FOXN3-212ENST00000556541 HSPA4P34932 840 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 TDO2P48775 406 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 ANAPC15P60006 121 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 RBM26Q5T8P6 1007 aaKnown RBP13.42□□□□□ -0.26
FOXN3-212ENST00000556541 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
FOXN3-212ENST00000556541 RNF20Q5VTR2 975 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 FOXP4Q8IVH2 680 aaPredicted RBP13.42□□□□□ -0.26
FOXN3-212ENST00000556541 DCPSQ96C86 337 aaKnown RBP13.42□□□□□ -0.26
FOXN3-212ENST00000556541 RRAGCQ9HB90 399 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 PI4KBQ9UBF8 816 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 RBM8AQ9Y5S9 174 aaKnown RBP13.42□□□□□ -0.26
FOXN3-212ENST00000556541 PAPPA2Q9BXP8 1791 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 TRPM7Q96QT4 1865 aa13.42□□□□□ -0.26
FOXN3-212ENST00000556541 CLRN2A0PK11 232 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 APPP05067 770 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 HLA-DOAP06340 250 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 MCCP23508 829 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 GABPAQ06546 454 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 RASA3Q14644 834 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 IMMTQ16891 758 aaKnown RBP13.41□□□□□ -0.26
FOXN3-212ENST00000556541 CDC37L1Q7L3B6 337 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 MAPKAPK5Q8IW41 473 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 SULF1Q8IWU6 871 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 TEPSINQ96N21 525 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
FOXN3-212ENST00000556541 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 ZNF287Q9HBT7 754 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 NMRK2Q9NPI5 230 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 MCM9Q9NXL9 1143 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
FOXN3-212ENST00000556541 HERC5Q9UII4 1024 aaKnown RBP13.41□□□□□ -0.26
FOXN3-212ENST00000556541 GREB1LQ9C091 1923 aaPredicted RBP13.41□□□□□ -0.26
FOXN3-212ENST00000556541 USP17L12C9JPN9 530 aa13.4□□□□□ -0.26
FOXN3-212ENST00000556541 USP17L21D6R901 530 aa13.4□□□□□ -0.26
FOXN3-212ENST00000556541 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
FOXN3-212ENST00000556541 RBM25P49756 843 aaKnown RBP13.4□□□□□ -0.26
FOXN3-212ENST00000556541 PPARAQ07869 468 aa13.4□□□□□ -0.26
FOXN3-212ENST00000556541 RNF41Q9H4P4 317 aaPredicted RBP13.4□□□□□ -0.26
FOXN3-212ENST00000556541 GPBP1L1Q9HC44 474 aaPredicted RBP13.4□□□□□ -0.26
FOXN3-212ENST00000556541 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
FOXN3-212ENST00000556541 TCP10L2B9ZVM9 353 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 ZNF213O14771 459 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 ORC4O43929 436 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 SEC24BO95487 1268 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 CYP21A2P08686 494 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
FOXN3-212ENST00000556541 CACNB3P54284 484 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 PICALMQ13492 652 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 KRT32Q14532 448 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms