RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 FDX2Q6P4F2 183 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 C12orf50Q8NA57 414 aaPredicted RBP6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 TMPRSS13Q9BYE2 586 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 CEP44Q9C0F1 390 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 CCDC39Q9UFE4 941 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 RBM47A0AV96 593 aaKnown RBP6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 MEGF11A6BM72 1044 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 BIN1O00499 593 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 GAS2O43903 313 aaKnown RBP6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 ZNF862O60290 1169 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 TAF1CQ15572 869 aaPredicted RBP6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 MSMPQ1L6U9 139 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 PCNX4Q63HM2 1172 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 MAP1SQ66K74 1059 aaPredicted RBP6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 PDZD3Q86UT5 571 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 ZNF428Q96B54 188 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 CRELD1Q96HD1 420 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 OSBPL1AQ9BXW6 950 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 RAD18Q9NS91 495 aa6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 BSDC1Q9NW68 430 aaPredicted RBP6.21□□□□□ -1.42
SUPT16H-206ENST00000556309 MRPL58Q14197 206 aaKnown RBP6.2□□□□□ -1.42
SUPT16H-206ENST00000556309 SV2BQ7L1I2 683 aa6.2□□□□□ -1.42
SUPT16H-206ENST00000556309 TP53INP2Q8IXH6 220 aa6.2□□□□□ -1.42
SUPT16H-206ENST00000556309 WDR18Q9BV38 432 aa6.2□□□□□ -1.42
SUPT16H-206ENST00000556309 CYP4F12Q9HCS2 524 aa6.2□□□□□ -1.42
SUPT16H-206ENST00000556309 USP31Q70CQ4 1352 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 DBX1A6NMT0 343 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 AOC2O75106 756 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 ZNF252P-AS1Q0IIN9 211 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 FBLN7Q53RD9 439 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 SMG8Q8ND04 991 aaKnown RBP6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 GPBAR1Q8TDU6 330 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 ANKRD24Q8TF21 1146 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 EMILIN2Q9BXX0 1053 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 AP4E1Q9UPM8 1137 aa6.19□□□□□ -1.42
SUPT16H-206ENST00000556309 ADH5P11766 374 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 MAP4P27816 1152 aaKnown RBP6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 SOX4Q06945 474 aaPredicted RBP6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 TTBK2Q6IQ55 1244 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 DYMQ7RTS9 669 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 YIPF2Q9BWQ6 316 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 SUGCTQ9HAC7 445 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 PPP1R9AQ9ULJ8 1098 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 TLR6Q9Y2C9 796 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 SAMM50Q9Y512 469 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 PCDHB5Q9Y5E4 795 aa6.18□□□□□ -1.42
SUPT16H-206ENST00000556309 TIAF1O95411 115 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 PTPN11Q06124 597 aaPredicted RBP6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 PKN1Q16512 942 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 TSNAXIP1Q2TAA8 658 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 SGO2Q562F6 1265 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 LDLRAD1Q5T700 205 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 LLGL2Q6P1M3 1020 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 PAOXQ6QHF9 649 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 TMEM87AQ8NBN3 555 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 C2CD4AQ8NCU7 369 aaPredicted RBP6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 ACSBG1Q96GR2 724 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 MFSD14AQ96MC6 490 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 BACH2Q9BYV9 841 aa6.17□□□□□ -1.42
SUPT16H-206ENST00000556309 TMPRSS2O15393 492 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 RXRBP28702 533 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 HOXA10P31260 410 aaPredicted RBP6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 LIG3P49916 1009 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 ST13P50502 369 aaKnown RBP6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 CYP27A1Q02318 531 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 HP1BP3Q5SSJ5 553 aaPredicted RBP6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 CDPF1Q6NVV7 123 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 FBLIM1Q8WUP2 373 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 MRRFQ96E11 262 aaKnown RBP6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 KRT82Q9NSB4 513 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 CSADQ9Y600 493 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 ACTL7BQ9Y614 415 aa6.16□□□□□ -1.42
SUPT16H-206ENST00000556309 DCDC2CA8MYV0 355 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 TFE3P19532 575 aaPredicted RBP6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 RAB6AP20340 208 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 CDK8P49336 464 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 USP11P51784 963 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 SEPT6Q14141 434 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 LRRC14Q15048 493 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 KIF4BQ2VIQ3 1234 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 BCL11AQ9H165 835 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 LGR6Q9HBX8 967 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 COPRSQ9NQ92 184 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 FAM105AQ9NUU6 356 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 KIAA1522Q9P206 1035 aaPredicted RBP6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 PCDHA4Q9UN74 947 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 PCDHGC5Q9Y5F6 944 aa6.15□□□□□ -1.42
SUPT16H-206ENST00000556309 MINDY4BA8MYZ0 360 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 CYP26A1O43174 497 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 TRIM37O94972 964 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 SLFN14P0C7P3 912 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 ITGAEP38570 1179 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 ASPAP45381 313 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 ID3Q02535 119 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 AGMOQ6ZNB7 445 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 C12orf40Q86WS4 652 aa6.14□□□□□ -1.43
SUPT16H-206ENST00000556309 STK11IPQ8N1F8 1099 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms