RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PLCB3Q01970 1234 aa12□□□□□ -0.49
ACTN1-216ENST00000556083 PLEKHM2Q8IWE5 1019 aa12□□□□□ -0.49
ACTN1-216ENST00000556083 GPHNQ9NQX3 736 aaPredicted RBP12□□□□□ -0.49
ACTN1-216ENST00000556083 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
ACTN1-216ENST00000556083 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
ACTN1-216ENST00000556083 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 TNNI3KQ59H18 835 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 TESK2Q96S53 571 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 NKIRAS1Q9NYS0 192 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 FPGT-TNNI3KV9GXZ4 949 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 EBAG9O00559 213 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 ZBTB16Q05516 673 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 TFCP2Q12800 502 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 CCDC125Q86Z20 511 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 SAMD15Q9P1V8 674 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 N4BP1O75113 896 aaKnown RBP11.99□□□□□ -0.49
ACTN1-216ENST00000556083 BCRP11274 1271 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 CYP26C1Q6V0L0 522 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 RUFY4Q6ZNE9 571 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 NECAB1Q8N987 351 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 TRIM7Q9C029 511 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 FAM114A2Q9NRY5 505 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 ATP8A2Q9NTI2 1148 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-216ENST00000556083 PARP2Q9UGN5 583 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 ODF2LQ9ULJ1 636 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 H0YIN7 160 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 DNA2P51530 1060 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 NLRX1Q86UT6 975 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 RGS22Q8NE09 1264 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 CNPY2Q9Y2B0 182 aa11.99□□□□□ -0.49
ACTN1-216ENST00000556083 ARHGEF35A5YM69 484 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 SEMA3EO15041 775 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 MBD4O95243 580 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 IBSPP21815 317 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-216ENST00000556083 USP26Q9BXU7 913 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 SLC52A2Q9HAB3 445 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 BCAP29Q9UHQ4 241 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 WDR62O43379 1518 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 TNFAIP3P21580 790 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 SLC9C1Q4G0N8 1177 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 ANO1Q5XXA6 986 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 MPNDQ8N594 471 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 FAM204AQ9H8W3 233 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 CCNL1Q9UK58 526 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-216ENST00000556083 LMTK3Q96Q04 1460 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 FLOT1O75955 427 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 CCT6AP40227 531 aaKnown RBP11.98□□□□□ -0.49
ACTN1-216ENST00000556083 ADCY7P51828 1080 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 SLC39A6Q13433 755 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 DCAF15Q66K64 600 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 HDXQ7Z353 690 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 FAM81BQ96LP2 452 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 C8orf37Q96NL8 207 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 AZI2Q9H6S1 392 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 MAST1Q9Y2H9 1570 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 TRAF5O00463 557 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 DNM1Q05193 864 aaKnown RBP11.98□□□□□ -0.49
ACTN1-216ENST00000556083 TRPC3Q13507 836 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 MTMR3Q13615 1198 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 PPP1R7Q15435 360 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 B4GALNT4Q76KP1 1039 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 OTUD6AQ7L8S5 288 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 NBPF11Q86T75 865 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 ZNF354CQ86Y25 554 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 DNM3Q9UQ16 869 aa11.98□□□□□ -0.49
ACTN1-216ENST00000556083 CFAP74Q9C0B2 1584 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 MXRA7P84157 204 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 PPP2R3AQ06190 1150 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 TBC1D8BQ0IIM8 1120 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 GNPTABQ3T906 1256 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 DAAM2Q86T65 1068 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 NSMCE1Q8WV22 266 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 ZKSCAN3Q9BRR0 538 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 M0QZ92 97 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 ITGA6P23229 1130 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 CCDC50Q8IVM0 306 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 EXOC8Q8IYI6 725 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 ARHGAP24Q8N264 748 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 NOC4LQ9BVI4 516 aaKnown RBP11.97□□□□□ -0.49
ACTN1-216ENST00000556083 DNAJC25Q9H1X3 360 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 SPC25Q9HBM1 224 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 GNPATO15228 680 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 UFL1O94874 794 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-216ENST00000556083 TRIML1Q8N9V2 468 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 PPFIBP2Q8ND30 876 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 TIGD1Q96MW7 591 aa11.97□□□□□ -0.49
ACTN1-216ENST00000556083 ZNF830Q96NB3 372 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-216ENST00000556083 BAG1Q99933 345 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-216ENST00000556083 ZBTB7BO15156 539 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-216ENST00000556083 NOL3O60936 208 aaKnown RBP11.96□□□□□ -0.49
ACTN1-216ENST00000556083 MARCKSP29966 332 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-216ENST00000556083 OTUD6BQ8N6M0 293 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms