RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 RHBDL3P58872 404 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 MOGSQ13724 837 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 POLA2Q14181 598 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 CCDC158Q5M9N0 1113 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 ZFPM1Q8IX07 1006 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 SCYL3Q8IZE3 742 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 FRAT1Q92837 279 aaPredicted RBP9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 NSUN4Q96CB9 384 aaKnown RBP9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 GCC1Q96CN9 775 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 ZNF333Q96JL9 665 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 HMG20BQ9P0W2 317 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 AFG3L2Q9Y4W6 797 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 ATRNL1Q5VV63 1379 aa9.59□□□□□ -0.87
PTCSC3-201ENST00000556013 MROH7-TTC4A0A0A0MT08 1334 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 A0A0G2JLL6 359 aaPredicted RBP9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 PDHXO00330 501 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 ZBTB7BO15156 539 aaPredicted RBP9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 BAG3O95817 575 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 PTPRAP18433 802 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 BTDP43251 543 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 PPP4CP60510 307 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 MECOMQ03112 1051 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 SLC9C1Q4G0N8 1177 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 SH3BP5LQ7L8J4 393 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 PRRT2Q7Z6L0 340 aaPredicted RBP9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 TMEM57Q8N5G2 664 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 PARK7Q99497 189 aaKnown RBP9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 OSBPL5Q9H0X9 879 aaPredicted RBP9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 DHX36Q9H2U1 1008 aaKnown RBP9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 PICK1Q9NRD5 415 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 ZHX2Q9Y6X8 837 aa9.58□□□□□ -0.88
PTCSC3-201ENST00000556013 POTEFA5A3E0 1075 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 DDTLA6NHG4 134 aaPredicted RBP9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 BCRP11274 1271 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 PLCG2P16885 1265 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 CAP1Q01518 475 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 GPAT2Q6NUI2 795 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 CERS3Q8IU89 383 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 FOXP4Q8IVH2 680 aaPredicted RBP9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 GINM1Q9NU53 330 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 LRP2BPQ9P2M1 347 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 PI4KBQ9UBF8 816 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 SRRDQ9UH36 339 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 HERC5Q9UII4 1024 aaKnown RBP9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 PTCH2Q9Y6C5 1203 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 RFX7Q2KHR2 1363 aa9.57□□□□□ -0.88
PTCSC3-201ENST00000556013 ADGRA2Q96PE1 1338 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 OTOFQ9HC10 1997 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 COL2A1P02458 1487 aaPredicted RBP9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 SURF6O75683 361 aaKnown RBP9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 MS4A1P11836 297 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 MCAMP43121 646 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 PSMC4P43686 418 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 TNNI3KQ59H18 835 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 ZNF384Q8TF68 577 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 NOL10Q9BSC4 688 aaKnown RBP9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 DDX4Q9NQI0 724 aaKnown RBP9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 RAI14Q9P0K7 980 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 FPGT-TNNI3KV9GXZ4 949 aa9.56□□□□□ -0.88
PTCSC3-201ENST00000556013 TNRC18O15417 2968 aaPredicted RBP9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 MYH13Q9UKX3 1938 aa9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 FCGRTP55899 365 aa9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 HNRNPUQ00839 825 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 TBC1D9Q6ZT07 1266 aa9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 FTSJ3Q8IY81 847 aaKnown RBP9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 PROCA1Q8NCQ7 364 aaPredicted RBP9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 TRIM47Q96LD4 638 aa9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 CPA4Q9UI42 421 aa9.55□□□□□ -0.88
PTCSC3-201ENST00000556013 AK9Q5TCS8 1911 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 MYH2Q9UKX2 1941 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 HTTP42858 3142 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 FMNL1O95466 1100 aaPredicted RBP9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 EN2P19622 333 aaPredicted RBP9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 OSBPP22059 807 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 CAP2P40123 477 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 PABPC4Q13310 644 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 PICALMQ13492 652 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 IRF5Q13568 498 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 SLC4A8Q2Y0W8 1093 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 HSP90AB4PQ58FF6 505 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 TTC39AQ5SRH9 613 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 NAA16Q6N069 864 aaPredicted RBP9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 ERC1Q8IUD2 1116 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 ZNF280CQ8ND82 737 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 RAET1EQ8TD07 263 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 PXYLP1Q8TE99 480 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 ARHGAP39Q9C0H5 1083 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 AS3MTQ9HBK9 375 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 PNMA3Q9UL41 463 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms