RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 IDH1O75874 414 aaKnown RBP8.11□□□□□ -1.11
TDP1-213ENST00000555880 NUDT7P0C024 238 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 UQCRFS1P1P0C7P4 283 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 ADD2P35612 726 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 MCAMP43121 646 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 CTSWP56202 376 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 ANTXR2P58335 489 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 KIF23Q02241 960 aaPredicted RBP8.11□□□□□ -1.11
TDP1-213ENST00000555880 UBE3CQ15386 1083 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 CEP135Q66GS9 1140 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 OTUD7BQ6GQQ9 843 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 DNAJC10Q8IXB1 793 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 RIPOR2Q9Y4F9 1068 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 CHD4Q14839 1912 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 FAM177BA6PVY3 158 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 TOM1O60784 492 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 ZNF202O95125 648 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 SMC2O95347 1197 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 CMA1P23946 247 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 GPTP24298 496 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 PTPN14Q15678 1187 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 PI16Q6UXB8 463 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 NFXL1Q6ZNB6 911 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 NLRP10Q86W26 655 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 SMAP1Q8IYB5 467 aaPredicted RBP8.1□□□□□ -1.11
TDP1-213ENST00000555880 CCDC150Q8NCX0 1101 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 ANKRD7Q92527 254 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 AIDAQ96BJ3 306 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 ALG1Q9BT22 464 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 GREM2Q9H772 168 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 ITGB4P16144 1822 aa8.1□□□□□ -1.11
TDP1-213ENST00000555880 KAT6BQ8WYB5 2073 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 SH2B2O14492 632 aaPredicted RBP8.09□□□□□ -1.11
TDP1-213ENST00000555880 IRS4O14654 1257 aaPredicted RBP8.09□□□□□ -1.11
TDP1-213ENST00000555880 PFKFB1P16118 471 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 NLRP12P59046 1061 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 SLC39A14Q15043 492 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 DPCR1Q3MIW9 517 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 RAB11FIP4Q86YS3 637 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 TTLL11Q8NHH1 800 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 TIGD1Q96MW7 591 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 TRMT112Q9UI30 125 aaKnown RBP8.09□□□□□ -1.11
TDP1-213ENST00000555880 ASAP1Q9ULH1 1129 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 MROH5Q6ZUA9 1318 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 ZNF532Q9HCE3 1301 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 ARAP2Q8WZ64 1704 aa8.09□□□□□ -1.11
TDP1-213ENST00000555880 ECM29Q5VYK3 1845 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 KIF28PB7ZC32 967 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 ZBTB43O43298 467 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 PDE8BO95263 885 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 PDE6AP16499 860 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 SFPQP23246 707 aaKnown RBP eCLIP8.09□□□□□ -1.12
TDP1-213ENST00000555880 IARSP41252 1262 aaKnown RBP8.09□□□□□ -1.12
TDP1-213ENST00000555880 SYKP43405 635 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.12
TDP1-213ENST00000555880 MICU3Q86XE3 530 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 VPS37DQ86XT2 251 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 PIGBQ92521 554 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 WASF1Q92558 559 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 ERCC4Q92889 916 aaPredicted RBP8.09□□□□□ -1.12
TDP1-213ENST00000555880 OSBPL5Q9H0X9 879 aaPredicted RBP8.09□□□□□ -1.12
TDP1-213ENST00000555880 CNNM2Q9H8M5 875 aa8.09□□□□□ -1.12
TDP1-213ENST00000555880 HOOK1Q9UJC3 728 aaKnown RBP8.09□□□□□ -1.12
TDP1-213ENST00000555880 LRP6O75581 1613 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 MYO5AQ9Y4I1 1855 aaKnown RBP8.08□□□□□ -1.12
TDP1-213ENST00000555880 NUP98P52948 1817 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 A0A087WWV3 80 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 BIN1O00499 593 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 IKBKBO14920 756 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 PDE8AO60658 829 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 PPP6R2O75170 966 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 SLC5A1P13866 664 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 ARID4AP29374 1257 aaPredicted RBP8.08□□□□□ -1.12
TDP1-213ENST00000555880 MAP3K12Q12852 859 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 TMEM67Q5HYA8 995 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 CCDC102BQ68D86 513 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 KRT40Q6A162 431 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 APOA5Q6Q788 366 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 OLFM4Q6UX06 510 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 TBC1D10CQ8IV04 446 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 KIF18AQ8NI77 898 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 LPIN2Q92539 896 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 NAPBQ9H115 298 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 PIH1D3Q9NQM4 214 aaKnown RBP8.08□□□□□ -1.12
TDP1-213ENST00000555880 IFNKQ9P0W0 207 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 CGNQ9P2M7 1197 aaKnown RBP8.08□□□□□ -1.12
TDP1-213ENST00000555880 PCDHGA4Q9Y5G9 962 aa8.08□□□□□ -1.12
TDP1-213ENST00000555880 NHSL1Q5SYE7 1610 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 B4E1Z4 1266 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 EXOC5O00471 708 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 CCP110O43303 1012 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 MYO1BO43795 1136 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms