RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, human

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDKN3-208	ENST00000555837	GLRX3	O76003	335 aa	Known RBP	27.7	■■■□□ 2.02
CDKN3-208	ENST00000555837	SSC5D	A1L4H1	1573 aa		27.69	■■■□□ 2.02
CDKN3-208	ENST00000555837	CTCF	P49711	727 aa	Predicted RBP	27.69	■■■□□ 2.02
CDKN3-208	ENST00000555837	ANTXR1	Q9H6X2	564 aa		27.69	■■■□□ 2.02
CDKN3-208	ENST00000555837	COL2A1	P02458	1487 aa	Predicted RBP	27.69	■■■□□ 2.02
CDKN3-208	ENST00000555837	KIF23	Q02241	960 aa	Predicted RBP	27.68	■■■□□ 2.02
CDKN3-208	ENST00000555837	WRNIP1	Q96S55	665 aa		27.68	■■■□□ 2.02
CDKN3-208	ENST00000555837	RFX7	Q2KHR2	1363 aa		27.68	■■■□□ 2.02
CDKN3-208	ENST00000555837	AK9	Q5TCS8	1911 aa		27.68	■■■□□ 2.02
CDKN3-208	ENST00000555837	MANSC4	A6NHS7	340 aa	Predicted RBP	27.67	■■■□□ 2.02
CDKN3-208	ENST00000555837	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	27.67	■■■□□ 2.02
CDKN3-208	ENST00000555837	OSBPL5	Q9H0X9	879 aa	Predicted RBP	27.67	■■■□□ 2.02
CDKN3-208	ENST00000555837	NDUFB9	Q9Y6M9	179 aa		27.67	■■■□□ 2.02
CDKN3-208	ENST00000555837	ATRNL1	Q5VV63	1379 aa		27.67	■■■□□ 2.02
CDKN3-208	ENST00000555837	PDE6A	P16499	860 aa		27.66	■■■□□ 2.02
CDKN3-208	ENST00000555837	MX1	P20591	662 aa		27.66	■■■□□ 2.02
CDKN3-208	ENST00000555837	SPRYD7	Q5W111	196 aa		27.66	■■■□□ 2.02
CDKN3-208	ENST00000555837	SMC5	Q8IY18	1101 aa		27.66	■■■□□ 2.02
CDKN3-208	ENST00000555837	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	27.66	■■■□□ 2.02
CDKN3-208	ENST00000555837	SAGE1	Q9NXZ1	904 aa		27.66	■■■□□ 2.02
CDKN3-208	ENST00000555837	DOCK2	Q92608	1830 aa		27.66	■■■□□ 2.02
CDKN3-208	ENST00000555837	MAGEB6P1	A0A0J9YX57	407 aa		27.65	■■■□□ 2.02
CDKN3-208	ENST00000555837	TBC1D12	O60347	775 aa		27.65	■■■□□ 2.02
CDKN3-208	ENST00000555837	USP5	P45974	858 aa		27.65	■■■□□ 2.02
CDKN3-208	ENST00000555837	OTUD7B	Q6GQQ9	843 aa		27.65	■■■□□ 2.02
CDKN3-208	ENST00000555837	TRIM34	Q9BYJ4	488 aa		27.65	■■■□□ 2.02
CDKN3-208	ENST00000555837	PI4KB	Q9UBF8	816 aa		27.65	■■■□□ 2.02
CDKN3-208	ENST00000555837	HERC5	Q9UII4	1024 aa	Known RBP	27.65	■■■□□ 2.02
CDKN3-208	ENST00000555837	ALDH1A1	P00352	501 aa		27.64	■■■□□ 2.02
CDKN3-208	ENST00000555837	HLA-DOA	P06340	250 aa		27.64	■■■□□ 2.02
CDKN3-208	ENST00000555837	ZFY	P08048	801 aa	Predicted RBP	27.64	■■■□□ 2.02
CDKN3-208	ENST00000555837	UBE3C	Q15386	1083 aa		27.64	■■■□□ 2.02
CDKN3-208	ENST00000555837	MIGA2	Q7L4E1	593 aa		27.64	■■■□□ 2.02
CDKN3-208	ENST00000555837	WNK4	Q96J92	1243 aa		27.64	■■■□□ 2.02
CDKN3-208	ENST00000555837	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.64	■■■□□ 2.02
CDKN3-208	ENST00000555837	ERO1B	Q86YB8	467 aa		27.63	■■■□□ 2.01
CDKN3-208	ENST00000555837	TGFBRAP1	Q8WUH2	860 aa		27.63	■■■□□ 2.01
CDKN3-208	ENST00000555837	DDRGK1	Q96HY6	314 aa		27.63	■■■□□ 2.01
CDKN3-208	ENST00000555837	DDX4	Q9NQI0	724 aa	Known RBP	27.63	■■■□□ 2.01
CDKN3-208	ENST00000555837	ZNF112	Q9UJU3	913 aa		27.63	■■■□□ 2.01
CDKN3-208	ENST00000555837	ZNF532	Q9HCE3	1301 aa		27.63	■■■□□ 2.01
CDKN3-208	ENST00000555837	MAP3K10	Q02779	954 aa		27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	VGLL4	Q14135	290 aa		27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	ADGRA1	Q86SQ6	560 aa		27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	CDAN1	Q8IWY9	1227 aa		27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	KBTBD3	Q8NAB2	608 aa		27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	MIGA1	Q8NAN2	632 aa		27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	FZD1	Q9UP38	647 aa		27.62	■■■□□ 2.01
CDKN3-208	ENST00000555837	ADD2	P35612	726 aa		27.61	■■■□□ 2.01
CDKN3-208	ENST00000555837	TM4SF4	P48230	202 aa		27.61	■■■□□ 2.01
CDKN3-208	ENST00000555837	TICAM2	Q86XR7	235 aa		27.61	■■■□□ 2.01
CDKN3-208	ENST00000555837	OPTN	Q96CV9	577 aa		27.61	■■■□□ 2.01
CDKN3-208	ENST00000555837	CLMN	Q96JQ2	1002 aa		27.61	■■■□□ 2.01
CDKN3-208	ENST00000555837	ELP3	Q9H9T3	547 aa		27.61	■■■□□ 2.01
CDKN3-208	ENST00000555837	TAOK2	Q9UL54	1235 aa		27.61	■■■□□ 2.01
CDKN3-208	ENST00000555837	GTF2A2	P52657	109 aa		27.6	■■■□□ 2.01
CDKN3-208	ENST00000555837	TTC6	Q86TZ1	520 aa		27.6	■■■□□ 2.01
CDKN3-208	ENST00000555837	ZFPM1	Q8IX07	1006 aa		27.6	■■■□□ 2.01
CDKN3-208	ENST00000555837	AMOTL1	Q8IY63	956 aa		27.6	■■■□□ 2.01
CDKN3-208	ENST00000555837	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	27.6	■■■□□ 2.01
CDKN3-208	ENST00000555837	PICK1	Q9NRD5	415 aa		27.6	■■■□□ 2.01
CDKN3-208	ENST00000555837	FLT1	P17948	1338 aa		27.6	■■■□□ 2.01
CDKN3-208	ENST00000555837	DDTL	A6NHG4	134 aa	Predicted RBP	27.59	■■■□□ 2.01
CDKN3-208	ENST00000555837	SPDYE5	A6NIY4	337 aa		27.59	■■■□□ 2.01
CDKN3-208	ENST00000555837	PPAT	Q06203	517 aa		27.59	■■■□□ 2.01
CDKN3-208	ENST00000555837	NOL9	Q5SY16	702 aa	Known RBP	27.59	■■■□□ 2.01
CDKN3-208	ENST00000555837	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	27.59	■■■□□ 2.01
CDKN3-208	ENST00000555837	PRDM10	Q9NQV6	1147 aa		27.59	■■■□□ 2.01
CDKN3-208	ENST00000555837	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	27.59	■■■□□ 2.01
CDKN3-208	ENST00000555837	STAP2	Q9UGK3	403 aa		27.59	■■■□□ 2.01
CDKN3-208	ENST00000555837	MYO5A	Q9Y4I1	1855 aa	Known RBP	27.58	■■■□□ 2.01
CDKN3-208	ENST00000555837	FOXN1	O15353	648 aa		27.58	■■■□□ 2.01
CDKN3-208	ENST00000555837	CTNND1	O60716	968 aa	Known RBP	27.58	■■■□□ 2.01
CDKN3-208	ENST00000555837	CHD1L	Q86WJ1	897 aa		27.58	■■■□□ 2.01
CDKN3-208	ENST00000555837	MAPKAPK5	Q8IW41	473 aa		27.58	■■■□□ 2.01
CDKN3-208	ENST00000555837	DYNLL1	P63167	89 aa	Known RBP	27.57	■■■□□ 2
CDKN3-208	ENST00000555837	NUCB1	Q02818	461 aa		27.57	■■■□□ 2
CDKN3-208	ENST00000555837	EDC3	Q96F86	508 aa	Known RBP	27.57	■■■□□ 2
CDKN3-208	ENST00000555837	RIOK1	Q9BRS2	568 aa	Known RBP	27.57	■■■□□ 2
CDKN3-208	ENST00000555837	TBC1D2	Q9BYX2	928 aa		27.57	■■■□□ 2
CDKN3-208	ENST00000555837	TCRBV5S4A2T	A0A5A2	114 aa		27.56	■■■□□ 2
CDKN3-208	ENST00000555837	MKRN3	Q13064	507 aa	Known RBP	27.56	■■■□□ 2
CDKN3-208	ENST00000555837	PPIL2	Q13356	520 aa		27.56	■■■□□ 2
CDKN3-208	ENST00000555837	B4GALNT3	Q6L9W6	998 aa		27.56	■■■□□ 2
CDKN3-208	ENST00000555837	SH3BP5L	Q7L8J4	393 aa		27.56	■■■□□ 2
CDKN3-208	ENST00000555837	SCYL3	Q8IZE3	742 aa		27.56	■■■□□ 2
CDKN3-208	ENST00000555837	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.56	■■■□□ 2
CDKN3-208	ENST00000555837	ATP8A2	Q9NTI2	1148 aa		27.56	■■■□□ 2
CDKN3-208	ENST00000555837	GINM1	Q9NU53	330 aa		27.56	■■■□□ 2
CDKN3-208	ENST00000555837	IGHD	P01880	384 aa		27.55	■■■□□ 2
CDKN3-208	ENST00000555837	PDE1A	P54750	535 aa		27.55	■■■□□ 2
CDKN3-208	ENST00000555837	PI4K2B	Q8TCG2	481 aa		27.55	■■■□□ 2
CDKN3-208	ENST00000555837	OTUD5	Q96G74	571 aa		27.55	■■■□□ 2
CDKN3-208	ENST00000555837	LNPK	Q9C0E8	428 aa		27.55	■■■□□ 2
CDKN3-208	ENST00000555837	SNCAIP	Q9Y6H5	919 aa		27.55	■■■□□ 2
CDKN3-208	ENST00000555837	CETP	P11597	493 aa		27.54	■■■□□ 2
CDKN3-208	ENST00000555837	IRX6	P78412	446 aa	Predicted RBP	27.54	■■■□□ 2
CDKN3-208	ENST00000555837	SNAPC2	Q13487	334 aa		27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms