RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 DMXL1Q9Y485 3027 aa15.09■□□□□ 0.01
ABCD4-222ENST00000555617 TCF15Q12870 199 aa15.08■□□□□ 0
ABCD4-222ENST00000555617 ANKRD13CQ8N6S4 541 aa15.08■□□□□ 0
ABCD4-222ENST00000555617 CCDC85AQ96PX6 553 aaPredicted RBP15.08■□□□□ 0
ABCD4-222ENST00000555617 TECTAO75443 2155 aa15.07■□□□□ 0
ABCD4-222ENST00000555617 KRT40Q6A162 431 aa15.07■□□□□ 0
ABCD4-222ENST00000555617 KMT2EQ8IZD2 1858 aa15.06■□□□□ 0
ABCD4-222ENST00000555617 ID4P47928 161 aa15.06■□□□□ 0
ABCD4-222ENST00000555617 NKX2-4Q9H2Z4 354 aa15.06■□□□□ 0
ABCD4-222ENST00000555617 IRS4O14654 1257 aaPredicted RBP15.05■□□□□ -0
ABCD4-222ENST00000555617 HOXB3P14651 431 aaPredicted RBP15.05■□□□□ -0
ABCD4-222ENST00000555617 CYP2B6P20813 491 aa15.05■□□□□ -0
ABCD4-222ENST00000555617 EIF4A1P60842 406 aaKnown RBP15.05■□□□□ -0
ABCD4-222ENST00000555617 COPS6Q7L5N1 327 aa15.05■□□□□ -0
ABCD4-222ENST00000555617 HERVK_113Q902F9 699 aa15.05■□□□□ -0
ABCD4-222ENST00000555617 ALG13Q9NP73 1137 aaKnown RBP15.05■□□□□ -0
ABCD4-222ENST00000555617 JAG2Q9Y219 1238 aa15.05■□□□□ -0
ABCD4-222ENST00000555617 YBX2Q9Y2T7 364 aaKnown RBP15.05■□□□□ -0
ABCD4-222ENST00000555617 PHIPQ8WWQ0 1821 aa15.05■□□□□ -0
ABCD4-222ENST00000555617 VPS13AQ96RL7 3174 aa15.04■□□□□ -0
ABCD4-222ENST00000555617 DIAPH1O60610 1272 aaKnown RBP15.04■□□□□ -0
ABCD4-222ENST00000555617 HSP90AB3PQ58FF7 597 aa15.04■□□□□ -0
ABCD4-222ENST00000555617 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
ABCD4-222ENST00000555617 GJD3Q8N144 294 aa15.04■□□□□ -0
ABCD4-222ENST00000555617 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.04■□□□□ -04e-7■□□□□ 11.2
ABCD4-222ENST00000555617 RFXAPO00287 272 aa15.03■□□□□ -0
ABCD4-222ENST00000555617 CCT4P50991 539 aaKnown RBP15.03■□□□□ -0
ABCD4-222ENST00000555617 RBM5P52756 815 aaKnown RBP eCLIP15.03■□□□□ -02e-6■□□□□ 10.6
ABCD4-222ENST00000555617 CACNB3P54284 484 aa15.03■□□□□ -0
ABCD4-222ENST00000555617 AIMP1Q12904 312 aaKnown RBP15.03■□□□□ -0
ABCD4-222ENST00000555617 TNFAIP1Q13829 316 aa15.03■□□□□ -0
ABCD4-222ENST00000555617 CCL14Q16627 93 aa15.03■□□□□ -0
ABCD4-222ENST00000555617 SLC39A5Q6ZMH5 540 aa15.03■□□□□ -0
ABCD4-222ENST00000555617 SOWAHBA6NEL2 793 aa15.02■□□□□ -0
ABCD4-222ENST00000555617 ATP5J2-PTCD1G3V325 749 aa15.02■□□□□ -0
ABCD4-222ENST00000555617 SNX17Q15036 470 aa15.02■□□□□ -0
ABCD4-222ENST00000555617 ASCL5Q7RTU5 278 aa15.02■□□□□ -0
ABCD4-222ENST00000555617 XAGE3Q8WTP9 111 aa15.02■□□□□ -0
ABCD4-222ENST00000555617 MTCH2Q9Y6C9 303 aa15.02■□□□□ -0
ABCD4-222ENST00000555617 RPAP1Q9BWH6 1393 aaPredicted RBP15.01□□□□□ -0.01
ABCD4-222ENST00000555617 PTPN5P54829 565 aa15.01□□□□□ -0.01
ABCD4-222ENST00000555617 RASIP1Q5U651 963 aa15.01□□□□□ -0.01
ABCD4-222ENST00000555617 ISCA1Q9BUE6 129 aa15.01□□□□□ -0.01
ABCD4-222ENST00000555617 MINPP1Q9UNW1 487 aa15.01□□□□□ -0.01
ABCD4-222ENST00000555617 ATRNL1Q5VV63 1379 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 POTEB3A0JP26 581 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 ALADP13716 330 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 TAF7Q15545 349 aaPredicted RBP15□□□□□ -0.01
ABCD4-222ENST00000555617 POTEBQ6S5H4 581 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 C16orf59Q7L2K0 433 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 MIGA2Q7L4E1 593 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 FAM178BQ8IXR5 827 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 COG5Q9UP83 839 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 FAM208BQ5VWN6 2430 aa15□□□□□ -0.01
ABCD4-222ENST00000555617 WDR87Q6ZQQ6 2873 aa14.99□□□□□ -0.01
ABCD4-222ENST00000555617 FPGSQ05932 587 aa14.99□□□□□ -0.01
ABCD4-222ENST00000555617 SMCR8Q8TEV9 937 aaPredicted RBP14.99□□□□□ -0.01
ABCD4-222ENST00000555617 CD209Q9NNX6 404 aa14.99□□□□□ -0.01
ABCD4-222ENST00000555617 DNM1LO00429 736 aa14.98□□□□□ -0.01
ABCD4-222ENST00000555617 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
ABCD4-222ENST00000555617 DCXO43602 365 aa14.98□□□□□ -0.01
ABCD4-222ENST00000555617 PEX10O60683 326 aa14.98□□□□□ -0.01
ABCD4-222ENST00000555617 FAM110CQ1W6H9 321 aa14.98□□□□□ -0.01
ABCD4-222ENST00000555617 GJC2Q5T442 439 aaPredicted RBP14.98□□□□□ -0.01
ABCD4-222ENST00000555617 ANKRD18AQ8IVF6 992 aa14.98□□□□□ -0.01
ABCD4-222ENST00000555617 PANK3Q9H999 370 aa14.98□□□□□ -0.01
ABCD4-222ENST00000555617 ZNF292O60281 2723 aa14.98□□□□□ -0.01
ABCD4-222ENST00000555617 DLG5Q8TDM6 1919 aa14.98□□□□□ -0.01
ABCD4-222ENST00000555617 SPTBN2O15020 2390 aa14.97□□□□□ -0.01
ABCD4-222ENST00000555617 A0A0G2JLL6 359 aaPredicted RBP14.97□□□□□ -0.01
ABCD4-222ENST00000555617 EPOPA6NHQ4 379 aa14.97□□□□□ -0.01
ABCD4-222ENST00000555617 PRKAR2BP31323 418 aa14.97□□□□□ -0.01
ABCD4-222ENST00000555617 TLE2Q04725 743 aa14.97□□□□□ -0.01
ABCD4-222ENST00000555617 ACAP1Q15027 740 aa14.97□□□□□ -0.01
ABCD4-222ENST00000555617 GADL1Q6ZQY3 521 aa14.97□□□□□ -0.01
ABCD4-222ENST00000555617 PRRT2Q7Z6L0 340 aaPredicted RBP14.97□□□□□ -0.01
ABCD4-222ENST00000555617 HLA-CQ95604 372 aa14.97□□□□□ -0.01
ABCD4-222ENST00000555617 A0A1B0GUL6 1792 aa14.97□□□□□ -0.01
ABCD4-222ENST00000555617 SNAP23O00161 211 aa14.96□□□□□ -0.01
ABCD4-222ENST00000555617 EIF2S2P20042 333 aaKnown RBP14.96□□□□□ -0.01
ABCD4-222ENST00000555617 SSTR3P32745 418 aaPredicted RBP14.96□□□□□ -0.01
ABCD4-222ENST00000555617 DZIP1LQ8IYY4 767 aaKnown RBP14.96□□□□□ -0.01
ABCD4-222ENST00000555617 JARID2Q92833 1246 aaPredicted RBP14.96□□□□□ -0.01
ABCD4-222ENST00000555617 POLR3GLQ9BT43 218 aa14.96□□□□□ -0.01
ABCD4-222ENST00000555617 MYOGP15173 224 aa14.95□□□□□ -0.02
ABCD4-222ENST00000555617 IL9P15248 144 aa14.95□□□□□ -0.02
ABCD4-222ENST00000555617 TMEM240Q5SV17 173 aa14.95□□□□□ -0.02
ABCD4-222ENST00000555617 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
ABCD4-222ENST00000555617 MAST4O15021 2626 aa14.95□□□□□ -0.02
ABCD4-222ENST00000555617 COL4A4P53420 1690 aaPredicted RBP14.94□□□□□ -0.02
ABCD4-222ENST00000555617 CXCL11O14625 94 aa14.94□□□□□ -0.02
ABCD4-222ENST00000555617 KIAA0355O15063 1070 aa14.94□□□□□ -0.02
ABCD4-222ENST00000555617 ZKSCAN1P17029 563 aaPredicted RBP14.94□□□□□ -0.02
ABCD4-222ENST00000555617 TREML2Q5T2D2 321 aa14.94□□□□□ -0.02
ABCD4-222ENST00000555617 RTF1Q92541 710 aaKnown RBP14.94□□□□□ -0.02
ABCD4-222ENST00000555617 ZNF112Q9UJU3 913 aa14.94□□□□□ -0.02
ABCD4-222ENST00000555617 POU3F3P20264 500 aaPredicted RBP14.93□□□□□ -0.02
ABCD4-222ENST00000555617 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
ABCD4-222ENST00000555617 LPAR1Q92633 364 aa14.93□□□□□ -0.02
ABCD4-222ENST00000555617 MFSD14AQ96MC6 490 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms