RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-215ENST00000555382 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
PRKCH-215ENST00000555382 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
PRKCH-215ENST00000555382 NBPF11Q86T75 865 aa11.72□□□□□ -0.53
PRKCH-215ENST00000555382 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRKCH-215ENST00000555382 ELP3Q9H9T3 547 aa11.72□□□□□ -0.53
PRKCH-215ENST00000555382 ECHDC1Q9NTX5 307 aa11.72□□□□□ -0.53
PRKCH-215ENST00000555382 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
PRKCH-215ENST00000555382 SALL1Q9NSC2 1324 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 ALPK3Q96L96 1907 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 DLL1O00548 723 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 ERC2O15083 957 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 SMARCA5O60264 1052 aaPredicted RBP11.71□□□□□ -0.53
PRKCH-215ENST00000555382 GLRX3O76003 335 aaKnown RBP11.71□□□□□ -0.53
PRKCH-215ENST00000555382 MX1P20591 662 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 LACTBP83111 547 aaPredicted RBP11.71□□□□□ -0.53
PRKCH-215ENST00000555382 MTFR1Q15390 333 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.53
PRKCH-215ENST00000555382 VPS37DQ86XT2 251 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 NEUROD6Q96NK8 337 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 DBNDD2Q9BQY9 259 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 SUGT1Q9Y2Z0 365 aa11.71□□□□□ -0.53
PRKCH-215ENST00000555382 CCL15-CCL14A0A0B4J2E2 113 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 APBB1O00213 710 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 SOX1O00570 391 aaPredicted RBP11.7□□□□□ -0.54
PRKCH-215ENST00000555382 TLR2O60603 784 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 ADORA1P30542 326 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 GYG1P46976 350 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 BCAMP50895 628 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 PDE1AP54750 535 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 CCL15Q16663 113 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 SLC4A8Q2Y0W8 1093 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 GORABQ5T7V8 394 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 TBC1D22AQ8WUA7 517 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 CCDC8Q9H0W5 538 aaPredicted RBP11.7□□□□□ -0.54
PRKCH-215ENST00000555382 VEZTQ9HBM0 779 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 ZCCHC17Q9NP64 241 aaKnown RBP11.7□□□□□ -0.54
PRKCH-215ENST00000555382 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 DOCK2Q92608 1830 aa11.7□□□□□ -0.54
PRKCH-215ENST00000555382 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
PRKCH-215ENST00000555382 F8W031 263 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-215ENST00000555382 PHKA1P46020 1223 aa11.69□□□□□ -0.54
PRKCH-215ENST00000555382 GTF2A2P52657 109 aa11.69□□□□□ -0.54
PRKCH-215ENST00000555382 WDR66Q8TBY9 1149 aa11.69□□□□□ -0.54
PRKCH-215ENST00000555382 HAUS7Q99871 368 aa11.69□□□□□ -0.54
PRKCH-215ENST00000555382 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-215ENST00000555382 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-215ENST00000555382 MUC3AQ02505 3323 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 MYH7P12883 1935 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 BTBD19C9JJ37 291 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 MYO1BO43795 1136 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 MYCP01106 439 aaPredicted RBP11.68□□□□□ -0.54
PRKCH-215ENST00000555382 GNRH1P01148 92 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 PDE4AP27815 886 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 GJA8P48165 433 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 RASGRF1Q13972 1273 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 ARHGEF6Q15052 776 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 TTC39AQ5SRH9 613 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 ZGPATQ8N5A5 531 aaKnown RBP11.68□□□□□ -0.54
PRKCH-215ENST00000555382 PI4K2BQ8TCG2 481 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 MRIQ9BWK5 157 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 TLR7Q9NYK1 1049 aaKnown RBP11.68□□□□□ -0.54
PRKCH-215ENST00000555382 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
PRKCH-215ENST00000555382 A0A1W2PPC1 479 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 MCAMP43121 646 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 PRMT2P55345 433 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 MAP3K9P80192 1104 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
PRKCH-215ENST00000555382 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 SLC17A8Q8NDX2 589 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 HMG20BQ9P0W2 317 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 SERPINA10Q9UK55 444 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 JAG2Q9Y219 1238 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 MGAMO43451 1857 aa11.67□□□□□ -0.54
PRKCH-215ENST00000555382 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
PRKCH-215ENST00000555382 GJB1P08034 283 aa11.66□□□□□ -0.54
PRKCH-215ENST00000555382 MOGSQ13724 837 aa11.66□□□□□ -0.54
PRKCH-215ENST00000555382 TNFAIP1Q13829 316 aa11.66□□□□□ -0.54
PRKCH-215ENST00000555382 GRIK5Q16478 980 aa11.66□□□□□ -0.54
PRKCH-215ENST00000555382 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
PRKCH-215ENST00000555382 OTUD7AQ8TE49 926 aaPredicted RBP11.66□□□□□ -0.54
PRKCH-215ENST00000555382 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
PRKCH-215ENST00000555382 SRRDQ9UH36 339 aa11.66□□□□□ -0.54
PRKCH-215ENST00000555382 RFX7Q2KHR2 1363 aa11.66□□□□□ -0.54
PRKCH-215ENST00000555382 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
PRKCH-215ENST00000555382 CDH23Q9H251 3354 aa11.65□□□□□ -0.54
PRKCH-215ENST00000555382 IRF6O14896 467 aa11.65□□□□□ -0.54
PRKCH-215ENST00000555382 HDLBPQ00341 1268 aaKnown RBP11.65□□□□□ -0.54
PRKCH-215ENST00000555382 BMP2KLQ5H9B9 411 aa11.65□□□□□ -0.54
PRKCH-215ENST00000555382 LRCH3Q96II8 777 aa11.65□□□□□ -0.54
PRKCH-215ENST00000555382 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.55
PRKCH-215ENST00000555382 MAST2Q6P0Q8 1798 aa11.64□□□□□ -0.55
PRKCH-215ENST00000555382 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
PRKCH-215ENST00000555382 CETPP11597 493 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms