RNA–Protein interactions for RNA: ENST00000555371.1

NFKBIA-204, Transcript of NFKB inhibitor alpha, humanhuman

TSL 3

Gene NFKBIA, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-204ENST00000555371 RNPC3Q96LT9 517 aaKnown RBP13.52□□□□□ -0.25
NFKBIA-204ENST00000555371 TAF5LO75529 589 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 IL1R1P14778 569 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 DNAJB2P25686 324 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 RTP1P59025 263 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 CHRNDQ07001 517 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 CCDC27Q2M243 656 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 MIER1Q8N108 512 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 BADQ92934 168 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 DBF4Q9UBU7 674 aaPredicted RBP13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 ATP11BQ9Y2G3 1177 aa13.51□□□□□ -0.25
NFKBIA-204ENST00000555371 TSR2Q969E8 191 aaKnown RBP13.5□□□□□ -0.25
NFKBIA-204ENST00000555371 HOOK2Q96ED9 719 aa13.5□□□□□ -0.25
NFKBIA-204ENST00000555371 MPHOSPH8Q99549 860 aa13.5□□□□□ -0.25
NFKBIA-204ENST00000555371 ZNF576Q9H609 170 aa13.5□□□□□ -0.25
NFKBIA-204ENST00000555371 TMOD2Q9NZR1 351 aa13.5□□□□□ -0.25
NFKBIA-204ENST00000555371 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
NFKBIA-204ENST00000555371 RLFQ13129 1914 aa13.49□□□□□ -0.25
NFKBIA-204ENST00000555371 ELL2O00472 640 aaPredicted RBP13.49□□□□□ -0.25
NFKBIA-204ENST00000555371 CYP2B6P20813 491 aa13.49□□□□□ -0.25
NFKBIA-204ENST00000555371 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
NFKBIA-204ENST00000555371 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
NFKBIA-204ENST00000555371 PRDM12Q9H4Q4 367 aa13.49□□□□□ -0.25
NFKBIA-204ENST00000555371 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
NFKBIA-204ENST00000555371 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
NFKBIA-204ENST00000555371 FASTKD5Q7L8L6 764 aaKnown RBP13.48□□□□□ -0.25
NFKBIA-204ENST00000555371 C11orf16Q9NQ32 467 aa13.48□□□□□ -0.25
NFKBIA-204ENST00000555371 HYPKQ9NX55 129 aa13.48□□□□□ -0.25
NFKBIA-204ENST00000555371 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
NFKBIA-204ENST00000555371 A0A0G2JLL6 359 aaPredicted RBP13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 CXCL11O14625 94 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 IGFBP4P22692 258 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 ITGA6P23229 1130 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 KCNQ1P51787 676 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 TFF2Q03403 129 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 FAM110CQ1W6H9 321 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 AKNAD1Q5T1N1 836 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 PRRT2Q7Z6L0 340 aaPredicted RBP13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 TIFAQ96CG3 184 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 DOCK2Q92608 1830 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
NFKBIA-204ENST00000555371 RPAP1Q9BWH6 1393 aaPredicted RBP13.46□□□□□ -0.25
NFKBIA-204ENST00000555371 HOXB7P09629 217 aa13.46□□□□□ -0.25
NFKBIA-204ENST00000555371 CACNB2Q08289 660 aaPredicted RBP13.46□□□□□ -0.25
NFKBIA-204ENST00000555371 GRIK5Q16478 980 aa13.46□□□□□ -0.25
NFKBIA-204ENST00000555371 LHX8Q68G74 356 aa13.46□□□□□ -0.25
NFKBIA-204ENST00000555371 WDR63Q8IWG1 891 aa13.46□□□□□ -0.25
NFKBIA-204ENST00000555371 PHAXQ9H814 394 aaKnown RBP13.46□□□□□ -0.25
NFKBIA-204ENST00000555371 GJD2Q9UKL4 321 aa13.46□□□□□ -0.25
NFKBIA-204ENST00000555371 DOCK1Q14185 1865 aa13.46□□□□□ -0.26
NFKBIA-204ENST00000555371 REV3LO60673 3130 aa13.46□□□□□ -0.26
NFKBIA-204ENST00000555371 IL16Q14005 1332 aa13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 BMP1P13497 986 aa13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 ZKSCAN1P17029 563 aaPredicted RBP13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 NOL9Q5SY16 702 aaKnown RBP13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 FAM83AQ86UY5 434 aa13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 MICALL1Q8N3F8 863 aa13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 ZHX2Q9Y6X8 837 aa13.45□□□□□ -0.26
NFKBIA-204ENST00000555371 ADGRE1Q14246 886 aa13.44□□□□□ -0.26
NFKBIA-204ENST00000555371 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
NFKBIA-204ENST00000555371 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.26
NFKBIA-204ENST00000555371 MYH16Q9H6N6 1097 aa13.44□□□□□ -0.26
NFKBIA-204ENST00000555371 CXXC1Q9P0U4 656 aaPredicted RBP13.44□□□□□ -0.26
NFKBIA-204ENST00000555371 SLC45A1Q9Y2W3 748 aa13.44□□□□□ -0.26
NFKBIA-204ENST00000555371 XIRP2A4UGR9 3374 aa13.44□□□□□ -0.26
NFKBIA-204ENST00000555371 FANCIQ9NVI1 1328 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 TRIM75PA6NK02 468 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 GPR37L1O60883 481 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 EPHB4P54760 987 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 NHLH1Q02575 133 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 TCP10Q12799 353 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 TREML2Q5T2D2 321 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 SH3RF1Q7Z6J0 888 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 TSPYL6Q8N831 410 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 PDLIM7Q9NR12 457 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 ZNF112Q9UJU3 913 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 LOC285556D6RIA3 1793 aa13.43□□□□□ -0.26
NFKBIA-204ENST00000555371 SMIM22K7EJ46 135 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 PLIN1O60240 522 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 TWISTNBQ3B726 338 aaPredicted RBP13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 UBE3BQ7Z3V4 1068 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 TEKT1Q969V4 418 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 METTL22Q9BUU2 404 aaPredicted RBP13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 PICK1Q9NRD5 415 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 PNMA3Q9UL41 463 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 AGTPBP1Q9UPW5 1226 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 GBF1Q92538 1859 aa13.42□□□□□ -0.26
NFKBIA-204ENST00000555371 ZDBF2Q9HCK1 2354 aa13.41□□□□□ -0.26
NFKBIA-204ENST00000555371 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
NFKBIA-204ENST00000555371 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
NFKBIA-204ENST00000555371 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
NFKBIA-204ENST00000555371 PBX2P40425 430 aa13.41□□□□□ -0.26
NFKBIA-204ENST00000555371 CHAF1AQ13111 956 aaPredicted RBP13.41□□□□□ -0.26
NFKBIA-204ENST00000555371 SKIV2LQ15477 1246 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms