RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PLCG2P16885 1265 aa14.5□□□□□ -0.09
VRK1-204ENST00000555351 SNAPC2Q13487 334 aa14.5□□□□□ -0.09
VRK1-204ENST00000555351 ZKSCAN4Q969J2 545 aaPredicted RBP14.5□□□□□ -0.09
VRK1-204ENST00000555351 EAF2Q96CJ1 260 aaPredicted RBP14.5□□□□□ -0.09
VRK1-204ENST00000555351 OTUD5Q96G74 571 aa14.5□□□□□ -0.09
VRK1-204ENST00000555351 PTPN18Q99952 460 aa14.5□□□□□ -0.09
VRK1-204ENST00000555351 RAI14Q9P0K7 980 aa14.5□□□□□ -0.09
VRK1-204ENST00000555351 AK9Q5TCS8 1911 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 CCL15-CCL14A0A0B4J2E2 113 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 TBC1D12O60347 775 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 CYP2E1P05181 493 aaPredicted RBP14.49□□□□□ -0.09
VRK1-204ENST00000555351 RGS19P49795 217 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 PPP4CP60510 307 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 CCL15Q16663 113 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 TBC1D9Q6ZT07 1266 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 MIGA2Q7L4E1 593 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 CERS3Q8IU89 383 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 ZFPM1Q8IX07 1006 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 BRI3BPQ8WY22 251 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 NOL10Q9BSC4 688 aaKnown RBP14.49□□□□□ -0.09
VRK1-204ENST00000555351 KCNH4Q9UQ05 1017 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 COG6Q9Y2V7 657 aa14.49□□□□□ -0.09
VRK1-204ENST00000555351 CCDC85CA6NKD9 419 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 PHF20L1A8MW92 1017 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 RAB11FIP3O75154 756 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 BAG3O95817 575 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 INPP5BP32019 993 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 CRHR2Q13324 411 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 NAA16Q6N069 864 aaPredicted RBP14.48□□□□□ -0.09
VRK1-204ENST00000555351 SH3BP5LQ7L8J4 393 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 ZSCAN29Q8IWY8 852 aaPredicted RBP14.48□□□□□ -0.09
VRK1-204ENST00000555351 RHPN1Q8TCX5 695 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 KIF1BPQ96EK5 621 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 ERO1AQ96HE7 468 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 R3HDMLQ9H3Y0 253 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 ZFYVE28Q9HCC9 887 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 EXOC6BQ9Y2D4 811 aa14.48□□□□□ -0.09
VRK1-204ENST00000555351 CXCL11O14625 94 aa14.47□□□□□ -0.09
VRK1-204ENST00000555351 IRF6O14896 467 aa14.47□□□□□ -0.09
VRK1-204ENST00000555351 CTNND1O60716 968 aaKnown RBP14.47□□□□□ -0.09
VRK1-204ENST00000555351 FBXO46Q6PJ61 603 aaPredicted RBP14.47□□□□□ -0.09
VRK1-204ENST00000555351 SCYL3Q8IZE3 742 aa14.47□□□□□ -0.09
VRK1-204ENST00000555351 CCDC8Q9H0W5 538 aaPredicted RBP14.47□□□□□ -0.09
VRK1-204ENST00000555351 DDX4Q9NQI0 724 aaKnown RBP14.47□□□□□ -0.09
VRK1-204ENST00000555351 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.47□□□□□ -0.09
VRK1-204ENST00000555351 DDTLA6NHG4 134 aaPredicted RBP14.46□□□□□ -0.09
VRK1-204ENST00000555351 ZAP70P43403 619 aa14.46□□□□□ -0.09
VRK1-204ENST00000555351 ARHGEF6Q15052 776 aa14.46□□□□□ -0.09
VRK1-204ENST00000555351 SIRT2Q8IXJ6 389 aa14.46□□□□□ -0.09
VRK1-204ENST00000555351 CLASRPQ8N2M8 674 aaKnown RBP14.46□□□□□ -0.09
VRK1-204ENST00000555351 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.46□□□□□ -0.09
VRK1-204ENST00000555351 OSBPL5Q9H0X9 879 aaPredicted RBP14.46□□□□□ -0.09
VRK1-204ENST00000555351 DHX36Q9H2U1 1008 aaKnown RBP14.46□□□□□ -0.09
VRK1-204ENST00000555351 SNRKQ9NRH2 765 aa14.46□□□□□ -0.09
VRK1-204ENST00000555351 TLR7Q9NYK1 1049 aaKnown RBP14.46□□□□□ -0.09
VRK1-204ENST00000555351 SP3Q02447 781 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 PICALMQ13492 652 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 TAF1CQ15572 869 aaPredicted RBP14.45□□□□□ -0.1
VRK1-204ENST00000555351 ANKRD23Q86SG2 305 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 AACSQ86V21 672 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 TEX11Q8IYF3 940 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 FAM43AQ8N2R8 423 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 TBC1D2Q9BYX2 928 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 PICK1Q9NRD5 415 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 HERC5Q9UII4 1024 aaKnown RBP14.45□□□□□ -0.1
VRK1-204ENST00000555351 FOCADQ5VW36 1801 aa14.45□□□□□ -0.1
VRK1-204ENST00000555351 DOCK1Q14185 1865 aa14.44□□□□□ -0.1
VRK1-204ENST00000555351 BTBD19C9JJ37 291 aa14.44□□□□□ -0.1
VRK1-204ENST00000555351 TLR2O60603 784 aa14.44□□□□□ -0.1
VRK1-204ENST00000555351 TTF1Q15361 905 aaPredicted RBP14.44□□□□□ -0.1
VRK1-204ENST00000555351 PIH1D3Q9NQM4 214 aaKnown RBP14.44□□□□□ -0.1
VRK1-204ENST00000555351 HPS5Q9UPZ3 1129 aa14.44□□□□□ -0.1
VRK1-204ENST00000555351 PTPRAP18433 802 aa14.43□□□□□ -0.1
VRK1-204ENST00000555351 MAP3K12Q12852 859 aa14.43□□□□□ -0.1
VRK1-204ENST00000555351 FASTKD5Q7L8L6 764 aaKnown RBP14.43□□□□□ -0.1
VRK1-204ENST00000555351 OTOP1Q7RTM1 612 aa14.43□□□□□ -0.1
VRK1-204ENST00000555351 METTL16Q86W50 562 aaKnown RBP14.43□□□□□ -0.1
VRK1-204ENST00000555351 SH3RF3Q8TEJ3 882 aaPredicted RBP14.43□□□□□ -0.1
VRK1-204ENST00000555351 AATFQ9NY61 560 aaKnown RBP eCLIP14.43□□□□□ -0.1
VRK1-204ENST00000555351 PI4KBQ9UBF8 816 aa14.43□□□□□ -0.1
VRK1-204ENST00000555351 CDK5RAP2Q96SN8 1893 aa14.42□□□□□ -0.1
VRK1-204ENST00000555351 MYO5AQ9Y4I1 1855 aaKnown RBP14.42□□□□□ -0.1
VRK1-204ENST00000555351 GNRH1P01148 92 aa14.42□□□□□ -0.1
VRK1-204ENST00000555351 IFIT2P09913 472 aaKnown RBP14.42□□□□□ -0.1
VRK1-204ENST00000555351 MOGSQ13724 837 aa14.42□□□□□ -0.1
VRK1-204ENST00000555351 FOXP4Q8IVH2 680 aaPredicted RBP14.42□□□□□ -0.1
VRK1-204ENST00000555351 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.42□□□□□ -0.11e-7■■■■■ 36.7
VRK1-204ENST00000555351 IL1RAPL2Q9NP60 686 aa14.42□□□□□ -0.1
VRK1-204ENST00000555351 GINM1Q9NU53 330 aa14.42□□□□□ -0.1
VRK1-204ENST00000555351 SLC45A1Q9Y2W3 748 aa14.42□□□□□ -0.1
VRK1-204ENST00000555351 AFG3L2Q9Y4W6 797 aa14.42□□□□□ -0.1
VRK1-204ENST00000555351 ZHX2Q9Y6X8 837 aa14.42□□□□□ -0.1
VRK1-204ENST00000555351 PHIPQ8WWQ0 1821 aa14.41□□□□□ -0.1
VRK1-204ENST00000555351 A0A0G2JLL6 359 aaPredicted RBP14.41□□□□□ -0.1
VRK1-204ENST00000555351 IDH1O75874 414 aaKnown RBP14.41□□□□□ -0.1
VRK1-204ENST00000555351 CYP7A1P22680 504 aa14.41□□□□□ -0.1
VRK1-204ENST00000555351 C20orf194Q5TEA3 1177 aa14.41□□□□□ -0.1
VRK1-204ENST00000555351 PRRT2Q7Z6L0 340 aaPredicted RBP14.41□□□□□ -0.1
VRK1-204ENST00000555351 ADGRA1Q86SQ6 560 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms