RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 STK32BQ9NY57 414 aa10.74□□□□□ -0.69
RPGRIP1-207ENST00000555322 BRPF3Q9ULD4 1205 aa10.74□□□□□ -0.69
RPGRIP1-207ENST00000555322 WTIPA6NIX2 430 aaPredicted RBP10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 CPLX1O14810 134 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 PRKAB2O43741 272 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 MMP10P09238 476 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 MRE11P49959 708 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 METAP2P50579 478 aaKnown RBP eCLIP10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 CHAF1AQ13111 956 aaPredicted RBP10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 RESTQ13127 1097 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 GPT2Q8TD30 523 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 CAMKK2Q96RR4 588 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 RGS17Q9UGC6 210 aaPredicted RBP10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 NSFL1CQ9UNZ2 370 aaKnown RBP10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 MROH7-TTC4A0A0A0MT08 1334 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 CCDC196A0A1B0GTZ2 297 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 ZBTB43O43298 467 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 LETM1O95202 739 aaPredicted RBP10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 PRDX5P30044 214 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 SLC15A2Q16348 729 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 GRIPAP1Q4V328 841 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 FOXD4L5Q5VV16 416 aaPredicted RBP10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 FOXD4L4Q8WXT5 416 aaPredicted RBP10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 EYA3Q99504 573 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 CFAP45Q9UL16 551 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 NAV1Q8NEY1 1877 aa10.73□□□□□ -0.69
RPGRIP1-207ENST00000555322 MYH15Q9Y2K3 1946 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 CCDC69A6NI79 296 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 KDM4AO75164 1064 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 CCDC178Q5BJE1 867 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 CHST3Q7LGC8 479 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 AMOTL1Q8IY63 956 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 WASF1Q92558 559 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 DCP1AQ9NPI6 582 aaPredicted RBP10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 IFIT3O14879 490 aaKnown RBP10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 CTDSPL2Q05D32 466 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 WTAPQ15007 396 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 UBAC1Q9BSL1 405 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 CNPY2Q9Y2B0 182 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 SLC12A7Q9Y666 1083 aa10.72□□□□□ -0.69
RPGRIP1-207ENST00000555322 GAKO14976 1311 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 CALM1P0DP23 149 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 CALM2P0DP24 149 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 CALM3P0DP25 149 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 FKBP1AP62942 108 aaKnown RBP10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 DYNLL1P63167 89 aaKnown RBP10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 CCT2P78371 535 aaKnown RBP10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 ZSCAN23Q3MJ62 389 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 CC2D2BQ6DHV5 1058 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 CTR9Q6PD62 1173 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 POTEAQ6S8J7 498 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 BRAPQ7Z569 592 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 SDR42E1Q8WUS8 393 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 ZNF396Q96N95 335 aaPredicted RBP10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 POLLQ9UGP5 575 aa10.71□□□□□ -0.69
RPGRIP1-207ENST00000555322 GOLGA8AA7E2F4 631 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 DNM1Q05193 864 aaKnown RBP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 PDE4BQ07343 736 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 CAVIN1Q6NZI2 390 aaKnown RBP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 NFXL1Q6ZNB6 911 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 MPNDQ8N594 471 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 GZF1Q9H116 711 aaPredicted RBP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 ZNF287Q9HBT7 754 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 NCOA5Q9HCD5 579 aaKnown RBP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 AATFQ9NY61 560 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 NAP1L2Q9ULW6 460 aaPredicted RBP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 C10orf71Q711Q0 1435 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 GPR75-ASB3A0A0A6YYF3 556 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 IFNAR1P17181 557 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 RTFDC1Q9BY42 306 aaPredicted RBP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 ORC3Q9UBD5 711 aaPredicted RBP10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 FOCADQ5VW36 1801 aa10.7□□□□□ -0.7
RPGRIP1-207ENST00000555322 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 DDAH1O94760 285 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 FDPSP14324 419 aaKnown RBP10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 BAG6P46379 1132 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 SEC23AQ15436 765 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 CCDC183Q5T5S1 534 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 DPP8Q6V1X1 898 aaPredicted RBP10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 FBXO18Q8NFZ0 1043 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 CNKSR1Q969H4 720 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 DDX11Q96FC9 970 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 C8orf76Q96K31 380 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 RBM28Q9NW13 759 aaKnown RBP10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 MINDY4BA8MYZ0 360 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 H0YIN7 160 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 FIBPO43427 364 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 SLC16A10Q8TF71 515 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 ZSCAN10Q96SZ4 725 aaPredicted RBP10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 MAP3K14Q99558 947 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 ZC3H12CQ9C0D7 883 aaKnown RBP10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 TACC3Q9Y6A5 838 aa10.69□□□□□ -0.7
RPGRIP1-207ENST00000555322 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms